RNA–Protein interactions for RNA: ENST00000496309.3

RN7SL564P-201, Transcript of RNA, 7SL, cytoplasmic 564, pseudogene, humanhuman

BASIC

Gene RN7SL564P, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL564P-201ENST00000496309 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
RN7SL564P-201ENST00000496309 ZNF335Q9H4Z2 1342 aaPredicted RBP20.55■□□□□ 0.88
RN7SL564P-201ENST00000496309 LTBP4Q8N2S1 1624 aa20.55■□□□□ 0.88
RN7SL564P-201ENST00000496309 NEXMIFQ5QGS0 1516 aa20.54■□□□□ 0.88
RN7SL564P-201ENST00000496309 ZNF326Q5BKZ1 582 aaKnown RBP20.54■□□□□ 0.88
RN7SL564P-201ENST00000496309 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
RN7SL564P-201ENST00000496309 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
RN7SL564P-201ENST00000496309 SENP3Q9H4L4 574 aaPredicted RBP20.53■□□□□ 0.88
RN7SL564P-201ENST00000496309 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
RN7SL564P-201ENST00000496309 HDGFP51858 240 aaKnown RBP20.51■□□□□ 0.87
RN7SL564P-201ENST00000496309 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
RN7SL564P-201ENST00000496309 ANKRD30BQ9BXX2 1392 aa20.49■□□□□ 0.87
RN7SL564P-201ENST00000496309 STRCP1A6NGW2 1772 aa20.49■□□□□ 0.87
RN7SL564P-201ENST00000496309 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
RN7SL564P-201ENST00000496309 BCANQ96GW7 911 aa20.48■□□□□ 0.87
RN7SL564P-201ENST00000496309 SLC26A8Q96RN1 970 aa20.48■□□□□ 0.87
RN7SL564P-201ENST00000496309 PPLO60437 1756 aa20.48■□□□□ 0.87
RN7SL564P-201ENST00000496309 NRXN3Q9Y4C0 1643 aa20.46■□□□□ 0.87
RN7SL564P-201ENST00000496309 IFT172Q9UG01 1749 aa20.46■□□□□ 0.87
RN7SL564P-201ENST00000496309 CERKQ8TCT0 537 aa20.45■□□□□ 0.86
RN7SL564P-201ENST00000496309 CPS1P31327 1500 aa20.44■□□□□ 0.86
RN7SL564P-201ENST00000496309 SETBP1Q9Y6X0 1596 aa20.44■□□□□ 0.86
RN7SL564P-201ENST00000496309 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
RN7SL564P-201ENST00000496309 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
RN7SL564P-201ENST00000496309 RGL3Q3MIN7 710 aa20.43■□□□□ 0.86
RN7SL564P-201ENST00000496309 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
RN7SL564P-201ENST00000496309 NWD1Q149M9 1564 aa20.4■□□□□ 0.86
RN7SL564P-201ENST00000496309 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
RN7SL564P-201ENST00000496309 DHX57Q6P158 1386 aaKnown RBP20.37■□□□□ 0.85
RN7SL564P-201ENST00000496309 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
RN7SL564P-201ENST00000496309 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
RN7SL564P-201ENST00000496309 TBX22Q9Y458 520 aa20.37■□□□□ 0.85
RN7SL564P-201ENST00000496309 LRRC7Q96NW7 1537 aa20.37■□□□□ 0.85
RN7SL564P-201ENST00000496309 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
RN7SL564P-201ENST00000496309 PCGF6Q9BYE7 350 aa20.36■□□□□ 0.85
RN7SL564P-201ENST00000496309 KCNA6P17658 529 aa20.34■□□□□ 0.85
RN7SL564P-201ENST00000496309 ALKQ9UM73 1620 aa20.34■□□□□ 0.85
RN7SL564P-201ENST00000496309 ADGRF5Q8IZF2 1346 aa20.33■□□□□ 0.85
RN7SL564P-201ENST00000496309 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.85
RN7SL564P-201ENST00000496309 XIRP1Q702N8 1843 aaKnown RBP20.33■□□□□ 0.85
RN7SL564P-201ENST00000496309 MYOM2P54296 1465 aa20.32■□□□□ 0.84
RN7SL564P-201ENST00000496309 METP08581 1390 aa20.32■□□□□ 0.84
RN7SL564P-201ENST00000496309 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
RN7SL564P-201ENST00000496309 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
RN7SL564P-201ENST00000496309 XRN1Q8IZH2 1706 aaKnown RBP20.3■□□□□ 0.84
RN7SL564P-201ENST00000496309 PIK3C2GO75747 1445 aa20.3■□□□□ 0.84
RN7SL564P-201ENST00000496309 FBXO41Q8TF61 875 aa20.29■□□□□ 0.84
RN7SL564P-201ENST00000496309 NRXN1Q9ULB1 1477 aa20.29■□□□□ 0.84
RN7SL564P-201ENST00000496309 RBM33Q96EV2 1170 aaKnown RBP20.27■□□□□ 0.84
RN7SL564P-201ENST00000496309 TMEM94Q12767 1356 aa20.26■□□□□ 0.83
RN7SL564P-201ENST00000496309 ILDR1Q86SU0 546 aaPredicted RBP20.26■□□□□ 0.83
RN7SL564P-201ENST00000496309 AMOTL2Q9Y2J4 779 aa20.26■□□□□ 0.83
RN7SL564P-201ENST00000496309 PROSER2Q86WR7 435 aaPredicted RBP20.25■□□□□ 0.83
RN7SL564P-201ENST00000496309 DCAF11Q8TEB1 546 aa20.25■□□□□ 0.83
RN7SL564P-201ENST00000496309 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
RN7SL564P-201ENST00000496309 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
RN7SL564P-201ENST00000496309 LAMC1P11047 1609 aa20.24■□□□□ 0.83
RN7SL564P-201ENST00000496309 KDM2AQ9Y2K7 1162 aa20.23■□□□□ 0.83
RN7SL564P-201ENST00000496309 UBAP1LF5GYI3 381 aa20.22■□□□□ 0.83
RN7SL564P-201ENST00000496309 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
RN7SL564P-201ENST00000496309 CFAP70Q5T0N1 1121 aa20.18■□□□□ 0.82
RN7SL564P-201ENST00000496309 C14orf93Q9H972 538 aaKnown RBP20.18■□□□□ 0.82
RN7SL564P-201ENST00000496309 PTCH1Q13635 1447 aa20.18■□□□□ 0.82
RN7SL564P-201ENST00000496309 TMEM132EQ6IEE7 984 aa20.17■□□□□ 0.82
RN7SL564P-201ENST00000496309 PRAG1Q86YV5 1406 aa20.17■□□□□ 0.82
RN7SL564P-201ENST00000496309 KNDC1Q76NI1 1749 aa20.16■□□□□ 0.82
RN7SL564P-201ENST00000496309 ROBO2Q9HCK4 1378 aa20.16■□□□□ 0.82
RN7SL564P-201ENST00000496309 TOM1O60784 492 aa20.15■□□□□ 0.82
RN7SL564P-201ENST00000496309 STAC3Q96MF2 364 aa20.15■□□□□ 0.82
RN7SL564P-201ENST00000496309 MSH6P52701 1360 aa20.15■□□□□ 0.82
RN7SL564P-201ENST00000496309 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
RN7SL564P-201ENST00000496309 NALCNQ8IZF0 1738 aa20.15■□□□□ 0.82
RN7SL564P-201ENST00000496309 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.81
RN7SL564P-201ENST00000496309 ADGRB1O14514 1584 aa20.14■□□□□ 0.81
RN7SL564P-201ENST00000496309 YTHDC2Q9H6S0 1430 aaKnown RBP20.14■□□□□ 0.81
RN7SL564P-201ENST00000496309 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.81
RN7SL564P-201ENST00000496309 C14orf37Q86TY3 774 aa20.14■□□□□ 0.81
RN7SL564P-201ENST00000496309 L3MBTL2Q969R5 705 aa20.14■□□□□ 0.81
RN7SL564P-201ENST00000496309 PIP4K2BP78356 416 aa20.13■□□□□ 0.81
RN7SL564P-201ENST00000496309 STK26Q9P289 416 aa20.13■□□□□ 0.81
RN7SL564P-201ENST00000496309 TECPR2O15040 1411 aa20.12■□□□□ 0.81
RN7SL564P-201ENST00000496309 SCAF1Q9H7N4 1312 aaKnown RBP20.12■□□□□ 0.81
RN7SL564P-201ENST00000496309 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
RN7SL564P-201ENST00000496309 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
RN7SL564P-201ENST00000496309 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
RN7SL564P-201ENST00000496309 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
RN7SL564P-201ENST00000496309 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
RN7SL564P-201ENST00000496309 DCCP43146 1447 aa20.06■□□□□ 0.8
RN7SL564P-201ENST00000496309 PLEKHH1Q9ULM0 1364 aa20.06■□□□□ 0.8
RN7SL564P-201ENST00000496309 WAPLQ7Z5K2 1190 aa20.05■□□□□ 0.8
RN7SL564P-201ENST00000496309 ROBO1Q9Y6N7 1651 aa20.05■□□□□ 0.8
RN7SL564P-201ENST00000496309 DLC1Q96QB1 1528 aa20.05■□□□□ 0.8
RN7SL564P-201ENST00000496309 TRPM1Q7Z4N2 1603 aa20.05■□□□□ 0.8
RN7SL564P-201ENST00000496309 ATF3P18847 181 aa20.04■□□□□ 0.8
RN7SL564P-201ENST00000496309 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
RN7SL564P-201ENST00000496309 CADPS2Q86UW7 1296 aa20.03■□□□□ 0.8
RN7SL564P-201ENST00000496309 ARHGEF28Q8N1W1 1705 aaKnown RBP20.02■□□□□ 0.8
RN7SL564P-201ENST00000496309 SLAIN2Q9P270 581 aa20.02■□□□□ 0.8
RN7SL564P-201ENST00000496309 TRAK1Q9UPV9 953 aa20.02■□□□□ 0.8
RN7SL564P-201ENST00000496309 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms