RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 XIRP1Q702N8 1843 aaKnown RBP30.96■■■□□ 2.55
COL9A2-211ENST00000496215 CLTCL1P53675 1640 aa30.95■■■□□ 2.54
COL9A2-211ENST00000496215 CHGAP10645 457 aaKnown RBP30.93■■■□□ 2.54
COL9A2-211ENST00000496215 SLC26A8Q96RN1 970 aa30.92■■■□□ 2.54
COL9A2-211ENST00000496215 SENP3Q9H4L4 574 aaPredicted RBP30.91■■■□□ 2.54
COL9A2-211ENST00000496215 PLEKHG1Q9ULL1 1385 aa30.91■■■□□ 2.54
COL9A2-211ENST00000496215 NWD1Q149M9 1564 aa30.88■■■□□ 2.53
COL9A2-211ENST00000496215 KIF1BO60333 1816 aa30.87■■■□□ 2.53
COL9A2-211ENST00000496215 SLC4A1APQ9BWU0 796 aaKnown RBP30.87■■■□□ 2.53
COL9A2-211ENST00000496215 PPP1R15AO75807 674 aaPredicted RBP30.86■■■□□ 2.53
COL9A2-211ENST00000496215 NUTM2DQ5VT03 806 aaPredicted RBP30.86■■■□□ 2.53
COL9A2-211ENST00000496215 SETD5Q9C0A6 1442 aa30.84■■■□□ 2.53
COL9A2-211ENST00000496215 HDGFP51858 240 aaKnown RBP30.84■■■□□ 2.53
COL9A2-211ENST00000496215 ADAMTS13Q76LX8 1427 aa30.82■■■□□ 2.52
COL9A2-211ENST00000496215 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.82■■■□□ 2.52
COL9A2-211ENST00000496215 CHD2O14647 1828 aaKnown RBP30.81■■■□□ 2.52
COL9A2-211ENST00000496215 DIP2AQ14689 1571 aa30.8■■■□□ 2.52
COL9A2-211ENST00000496215 NRXN3Q9Y4C0 1643 aa30.8■■■□□ 2.52
COL9A2-211ENST00000496215 KCNA6P17658 529 aa30.79■■■□□ 2.52
COL9A2-211ENST00000496215 BCANQ96GW7 911 aa30.79■■■□□ 2.52
COL9A2-211ENST00000496215 ACIN1Q9UKV3 1341 aaKnown RBP30.77■■■□□ 2.52
COL9A2-211ENST00000496215 NEXMIFQ5QGS0 1516 aa30.77■■■□□ 2.52
COL9A2-211ENST00000496215 NKTRP30414 1462 aaKnown RBP30.76■■■□□ 2.52
COL9A2-211ENST00000496215 TOM1O60784 492 aa30.76■■■□□ 2.51
COL9A2-211ENST00000496215 PIP4K2BP78356 416 aa30.76■■■□□ 2.51
COL9A2-211ENST00000496215 TMEM94Q12767 1356 aa30.75■■■□□ 2.51
COL9A2-211ENST00000496215 FOXD1Q16676 465 aa30.74■■■□□ 2.51
COL9A2-211ENST00000496215 RAB3GAP2Q9H2M9 1393 aa30.74■■■□□ 2.51
COL9A2-211ENST00000496215 ZNF326Q5BKZ1 582 aaKnown RBP30.72■■■□□ 2.51
COL9A2-211ENST00000496215 RBM33Q96EV2 1170 aaKnown RBP30.72■■■□□ 2.51
COL9A2-211ENST00000496215 SCAF1Q9H7N4 1312 aaKnown RBP30.72■■■□□ 2.51
COL9A2-211ENST00000496215 SETBP1Q9Y6X0 1596 aa30.71■■■□□ 2.51
COL9A2-211ENST00000496215 TBX22Q9Y458 520 aa30.71■■■□□ 2.51
COL9A2-211ENST00000496215 MPHOSPH9Q99550 1183 aa30.69■■■□□ 2.5
COL9A2-211ENST00000496215 CCDC144AA2RUR9 1427 aa30.67■■■□□ 2.5
COL9A2-211ENST00000496215 PTPRUQ92729 1446 aa30.66■■■□□ 2.5
COL9A2-211ENST00000496215 HSPA1LP34931 641 aa30.66■■■□□ 2.5
COL9A2-211ENST00000496215 PROSER2Q86WR7 435 aaPredicted RBP30.66■■■□□ 2.5
COL9A2-211ENST00000496215 PPLO60437 1756 aa30.64■■■□□ 2.5
COL9A2-211ENST00000496215 PIK3R4Q99570 1358 aa30.62■■■□□ 2.49
COL9A2-211ENST00000496215 XRN1Q8IZH2 1706 aaKnown RBP30.61■■■□□ 2.49
COL9A2-211ENST00000496215 SETD1AO15047 1707 aaKnown RBP30.59■■■□□ 2.49
COL9A2-211ENST00000496215 METP08581 1390 aa30.57■■■□□ 2.48
COL9A2-211ENST00000496215 ILDR2Q71H61 639 aa30.57■■■□□ 2.48
COL9A2-211ENST00000496215 IFT172Q9UG01 1749 aa30.56■■■□□ 2.48
COL9A2-211ENST00000496215 SPATA31E1Q6ZUB1 1445 aa30.55■■■□□ 2.48
COL9A2-211ENST00000496215 RPGRIP1LQ68CZ1 1315 aa30.53■■■□□ 2.48
COL9A2-211ENST00000496215 AMOTL2Q9Y2J4 779 aa30.52■■■□□ 2.48
COL9A2-211ENST00000496215 ROBO1Q9Y6N7 1651 aa30.52■■■□□ 2.48
COL9A2-211ENST00000496215 MSH6P52701 1360 aa30.5■■■□□ 2.47
COL9A2-211ENST00000496215 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.5■■■□□ 2.47
COL9A2-211ENST00000496215 DISP3Q9P2K9 1392 aa30.49■■■□□ 2.47
COL9A2-211ENST00000496215 FAM135BQ49AJ0 1406 aa30.48■■■□□ 2.47
COL9A2-211ENST00000496215 NCOA3Q9Y6Q9 1424 aa30.48■■■□□ 2.47
COL9A2-211ENST00000496215 VGFO15240 615 aaPredicted RBP30.48■■■□□ 2.47
COL9A2-211ENST00000496215 HRCP23327 699 aa30.47■■■□□ 2.47
COL9A2-211ENST00000496215 MED1Q15648 1581 aaPredicted RBP30.43■■■□□ 2.46
COL9A2-211ENST00000496215 ADGRF5Q8IZF2 1346 aa30.41■■■□□ 2.46
COL9A2-211ENST00000496215 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
COL9A2-211ENST00000496215 RGL3Q3MIN7 710 aa30.4■■■□□ 2.46
COL9A2-211ENST00000496215 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.45
COL9A2-211ENST00000496215 SLAIN2Q9P270 581 aa30.38■■■□□ 2.45
COL9A2-211ENST00000496215 C14orf37Q86TY3 774 aa30.37■■■□□ 2.45
COL9A2-211ENST00000496215 C19orf44Q9H6X5 657 aa30.35■■■□□ 2.45
COL9A2-211ENST00000496215 PRAG1Q86YV5 1406 aa30.35■■■□□ 2.45
COL9A2-211ENST00000496215 ASXL1Q8IXJ9 1541 aa30.34■■■□□ 2.45
COL9A2-211ENST00000496215 MYOM2P54296 1465 aa30.34■■■□□ 2.45
COL9A2-211ENST00000496215 PTCH1Q13635 1447 aa30.33■■■□□ 2.45
COL9A2-211ENST00000496215 PIK3C2GO75747 1445 aa30.32■■■□□ 2.44
COL9A2-211ENST00000496215 ROBO2Q9HCK4 1378 aa30.32■■■□□ 2.44
COL9A2-211ENST00000496215 SOCS7O14512 581 aa30.32■■■□□ 2.44
COL9A2-211ENST00000496215 LAMC1P11047 1609 aa30.32■■■□□ 2.44
COL9A2-211ENST00000496215 DCCP43146 1447 aa30.31■■■□□ 2.44
COL9A2-211ENST00000496215 ADGRL3Q9HAR2 1447 aa30.3■■■□□ 2.44
COL9A2-211ENST00000496215 PHLPP1O60346 1717 aa30.3■■■□□ 2.44
COL9A2-211ENST00000496215 NRXN1Q9ULB1 1477 aa30.28■■■□□ 2.44
COL9A2-211ENST00000496215 CADPS2Q86UW7 1296 aa30.28■■■□□ 2.44
COL9A2-211ENST00000496215 COL16A1Q07092 1604 aaPredicted RBP30.27■■■□□ 2.44
COL9A2-211ENST00000496215 ATF3P18847 181 aa30.27■■■□□ 2.44
COL9A2-211ENST00000496215 MST1RQ04912 1400 aa30.27■■■□□ 2.44
COL9A2-211ENST00000496215 KNDC1Q76NI1 1749 aa30.26■■■□□ 2.43
COL9A2-211ENST00000496215 AHDC1Q5TGY3 1603 aaPredicted RBP30.23■■■□□ 2.43
COL9A2-211ENST00000496215 BRINP3Q76B58 766 aa30.19■■■□□ 2.42
COL9A2-211ENST00000496215 TECPR2O15040 1411 aa30.19■■■□□ 2.42
COL9A2-211ENST00000496215 TMEM132EQ6IEE7 984 aa30.17■■■□□ 2.42
COL9A2-211ENST00000496215 LRPPRCP42704 1394 aaKnown RBP30.16■■■□□ 2.42
COL9A2-211ENST00000496215 NHSL1Q5SYE7 1610 aa30.15■■■□□ 2.42
COL9A2-211ENST00000496215 C14orf93Q9H972 538 aaKnown RBP30.13■■■□□ 2.41
COL9A2-211ENST00000496215 STK26Q9P289 416 aa30.13■■■□□ 2.41
COL9A2-211ENST00000496215 YTHDC2Q9H6S0 1430 aaKnown RBP30.13■■■□□ 2.41
COL9A2-211ENST00000496215 C1orf167Q5SNV9 1468 aa30.12■■■□□ 2.41
COL9A2-211ENST00000496215 CDC42BPGQ6DT37 1551 aa30.11■■■□□ 2.41
COL9A2-211ENST00000496215 CFAP70Q5T0N1 1121 aa30.11■■■□□ 2.41
COL9A2-211ENST00000496215 ABCC11Q96J66 1382 aa30.11■■■□□ 2.41
COL9A2-211ENST00000496215 PLEKHH1Q9ULM0 1364 aa30.11■■■□□ 2.41
COL9A2-211ENST00000496215 DHX57Q6P158 1386 aaKnown RBP30.1■■■□□ 2.41
COL9A2-211ENST00000496215 JCADQ9P266 1359 aa30.08■■■□□ 2.41
COL9A2-211ENST00000496215 WAPLQ7Z5K2 1190 aa30.08■■■□□ 2.41
COL9A2-211ENST00000496215 SHPRHQ149N8 1683 aa30.07■■■□□ 2.41
COL9A2-211ENST00000496215 ADGRB1O14514 1584 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms