RNA–Protein interactions for RNA: ENST00000496015.5

ABCD4-217, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 1,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-217ENST00000496015 PPP1R15AO75807 674 aaPredicted RBP20.63■□□□□ 0.89
ABCD4-217ENST00000496015 TMEM131LA2VDJ0 1609 aa20.63■□□□□ 0.89
ABCD4-217ENST00000496015 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.6■□□□□ 0.89
ABCD4-217ENST00000496015 SLC26A8Q96RN1 970 aa20.6■□□□□ 0.89
ABCD4-217ENST00000496015 KCNA6P17658 529 aa20.59■□□□□ 0.89
ABCD4-217ENST00000496015 RIMS2Q9UQ26 1411 aa20.59■□□□□ 0.89
ABCD4-217ENST00000496015 ZFYVE9O95405 1425 aa20.58■□□□□ 0.88
ABCD4-217ENST00000496015 NAIPQ13075 1403 aa20.57■□□□□ 0.88
ABCD4-217ENST00000496015 PLEKHG1Q9ULL1 1385 aa20.57■□□□□ 0.88
ABCD4-217ENST00000496015 SPHKAPQ2M3C7 1700 aa20.56■□□□□ 0.88
ABCD4-217ENST00000496015 XIRP1Q702N8 1843 aaKnown RBP20.55■□□□□ 0.88
ABCD4-217ENST00000496015 HSPA1LP34931 641 aa20.54■□□□□ 0.88
ABCD4-217ENST00000496015 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
ABCD4-217ENST00000496015 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
ABCD4-217ENST00000496015 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
ABCD4-217ENST00000496015 TRIM52Q96A61 297 aa20.51■□□□□ 0.87
ABCD4-217ENST00000496015 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
ABCD4-217ENST00000496015 NKTRP30414 1462 aaKnown RBP20.5■□□□□ 0.87
ABCD4-217ENST00000496015 TMEM94Q12767 1356 aa20.5■□□□□ 0.87
ABCD4-217ENST00000496015 TBX22Q9Y458 520 aa20.5■□□□□ 0.87
ABCD4-217ENST00000496015 NWD1Q149M9 1564 aa20.5■□□□□ 0.87
ABCD4-217ENST00000496015 CHD2O14647 1828 aaKnown RBP20.49■□□□□ 0.87
ABCD4-217ENST00000496015 SOCS7O14512 581 aa20.49■□□□□ 0.87
ABCD4-217ENST00000496015 NUTM2DQ5VT03 806 aaPredicted RBP20.49■□□□□ 0.87
ABCD4-217ENST00000496015 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
ABCD4-217ENST00000496015 DIP2AQ14689 1571 aa20.46■□□□□ 0.87
ABCD4-217ENST00000496015 KIF1BO60333 1816 aa20.45■□□□□ 0.86
ABCD4-217ENST00000496015 TRPM2O94759 1503 aa20.44■□□□□ 0.86
ABCD4-217ENST00000496015 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
ABCD4-217ENST00000496015 MSH6P52701 1360 aa20.44■□□□□ 0.86
ABCD4-217ENST00000496015 PIK3R4Q99570 1358 aa20.44■□□□□ 0.86
ABCD4-217ENST00000496015 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
ABCD4-217ENST00000496015 CLTCL1P53675 1640 aa20.42■□□□□ 0.86
ABCD4-217ENST00000496015 ADAMTS13Q76LX8 1427 aa20.42■□□□□ 0.86
ABCD4-217ENST00000496015 FAM135BQ49AJ0 1406 aa20.39■□□□□ 0.85
ABCD4-217ENST00000496015 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
ABCD4-217ENST00000496015 NCOA3Q9Y6Q9 1424 aa20.38■□□□□ 0.85
ABCD4-217ENST00000496015 ACIN1Q9UKV3 1341 aaKnown RBP20.37■□□□□ 0.85
ABCD4-217ENST00000496015 SETBP1Q9Y6X0 1596 aa20.37■□□□□ 0.85
ABCD4-217ENST00000496015 SLAIN2Q9P270 581 aa20.35■□□□□ 0.85
ABCD4-217ENST00000496015 AMOTL2Q9Y2J4 779 aa20.35■□□□□ 0.85
ABCD4-217ENST00000496015 ROBO1Q9Y6N7 1651 aa20.35■□□□□ 0.85
ABCD4-217ENST00000496015 NEXMIFQ5QGS0 1516 aa20.33■□□□□ 0.85
ABCD4-217ENST00000496015 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.85
ABCD4-217ENST00000496015 NRXN3Q9Y4C0 1643 aa20.33■□□□□ 0.84
ABCD4-217ENST00000496015 C19orf44Q9H6X5 657 aa20.32■□□□□ 0.84
ABCD4-217ENST00000496015 RPGRIP1LQ68CZ1 1315 aa20.31■□□□□ 0.84
ABCD4-217ENST00000496015 ATF3P18847 181 aa20.31■□□□□ 0.84
ABCD4-217ENST00000496015 CADPS2Q86UW7 1296 aa20.31■□□□□ 0.84
ABCD4-217ENST00000496015 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
ABCD4-217ENST00000496015 MPHOSPH9Q99550 1183 aa20.29■□□□□ 0.84
ABCD4-217ENST00000496015 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.29■□□□□ 0.84
ABCD4-217ENST00000496015 PTPRUQ92729 1446 aa20.28■□□□□ 0.84
ABCD4-217ENST00000496015 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
ABCD4-217ENST00000496015 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.84
ABCD4-217ENST00000496015 METP08581 1390 aa20.27■□□□□ 0.84
ABCD4-217ENST00000496015 FOXD1Q16676 465 aa20.27■□□□□ 0.84
ABCD4-217ENST00000496015 SETD5Q9C0A6 1442 aa20.26■□□□□ 0.83
ABCD4-217ENST00000496015 PHLPP1O60346 1717 aa20.25■□□□□ 0.83
ABCD4-217ENST00000496015 PPLO60437 1756 aa20.25■□□□□ 0.83
ABCD4-217ENST00000496015 DCCP43146 1447 aa20.22■□□□□ 0.83
ABCD4-217ENST00000496015 RGL3Q3MIN7 710 aa20.19■□□□□ 0.82
ABCD4-217ENST00000496015 SETD1AO15047 1707 aaKnown RBP20.17■□□□□ 0.82
ABCD4-217ENST00000496015 ANKRD30BQ9BXX2 1392 aa20.17■□□□□ 0.82
ABCD4-217ENST00000496015 JCADQ9P266 1359 aa20.17■□□□□ 0.82
ABCD4-217ENST00000496015 RAB3GAP2Q9H2M9 1393 aa20.16■□□□□ 0.82
ABCD4-217ENST00000496015 ADGRL3Q9HAR2 1447 aa20.16■□□□□ 0.82
ABCD4-217ENST00000496015 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
ABCD4-217ENST00000496015 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
ABCD4-217ENST00000496015 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-217ENST00000496015 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
ABCD4-217ENST00000496015 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
ABCD4-217ENST00000496015 NALCNQ8IZF0 1738 aa20.13■□□□□ 0.81
ABCD4-217ENST00000496015 IFT172Q9UG01 1749 aa20.13■□□□□ 0.81
ABCD4-217ENST00000496015 MST1RQ04912 1400 aa20.11■□□□□ 0.81
ABCD4-217ENST00000496015 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
ABCD4-217ENST00000496015 RGS17Q9UGC6 210 aaPredicted RBP20.11■□□□□ 0.81
ABCD4-217ENST00000496015 PRAG1Q86YV5 1406 aa20.1■□□□□ 0.81
ABCD4-217ENST00000496015 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
ABCD4-217ENST00000496015 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
ABCD4-217ENST00000496015 SPATA31A6Q5VVP1 1343 aa20.08■□□□□ 0.81
ABCD4-217ENST00000496015 HRCP23327 699 aa20.07■□□□□ 0.8
ABCD4-217ENST00000496015 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
ABCD4-217ENST00000496015 PIK3C2GO75747 1445 aa20.05■□□□□ 0.8
ABCD4-217ENST00000496015 STK26Q9P289 416 aa20.05■□□□□ 0.8
ABCD4-217ENST00000496015 NHSL1Q5SYE7 1610 aa20.05■□□□□ 0.8
ABCD4-217ENST00000496015 MEX3CQ5U5Q3 659 aaKnown RBP20.04■□□□□ 0.8
ABCD4-217ENST00000496015 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
ABCD4-217ENST00000496015 LRPPRCP42704 1394 aaKnown RBP20.03■□□□□ 0.8
ABCD4-217ENST00000496015 C1orf167Q5SNV9 1468 aa20.03■□□□□ 0.8
ABCD4-217ENST00000496015 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
ABCD4-217ENST00000496015 TMEM132EQ6IEE7 984 aa20.01■□□□□ 0.79
ABCD4-217ENST00000496015 LAMC1P11047 1609 aa20.01■□□□□ 0.79
ABCD4-217ENST00000496015 TECPR2O15040 1411 aa20.01■□□□□ 0.79
ABCD4-217ENST00000496015 MYOM2P54296 1465 aa20■□□□□ 0.79
ABCD4-217ENST00000496015 KNDC1Q76NI1 1749 aa20■□□□□ 0.79
ABCD4-217ENST00000496015 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
ABCD4-217ENST00000496015 YTHDC2Q9H6S0 1430 aaKnown RBP19.98■□□□□ 0.79
ABCD4-217ENST00000496015 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
ABCD4-217ENST00000496015 DHX57Q6P158 1386 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms