RNA–Protein interactions for RNA: ENST00000495794.5

BRD9-213, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 4,865 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-213ENST00000495794 TEFQ10587 303 aa17.27■□□□□ 0.35
BRD9-213ENST00000495794 NBPF8Q3BBV2 869 aa17.26■□□□□ 0.35
BRD9-213ENST00000495794 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
BRD9-213ENST00000495794 CFAP70Q5T0N1 1121 aa17.26■□□□□ 0.35
BRD9-213ENST00000495794 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
BRD9-213ENST00000495794 RILPL2Q969X0 211 aa17.25■□□□□ 0.35
BRD9-213ENST00000495794 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
BRD9-213ENST00000495794 NBPF1Q3BBV0 1214 aa17.25■□□□□ 0.35
BRD9-213ENST00000495794 HFM1A2PYH4 1435 aa17.24■□□□□ 0.35
BRD9-213ENST00000495794 EHBP1L1Q8N3D4 1523 aa17.23■□□□□ 0.35
BRD9-213ENST00000495794 DDX11L8A8MPP1 907 aa17.23■□□□□ 0.35
BRD9-213ENST00000495794 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
BRD9-213ENST00000495794 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
BRD9-213ENST00000495794 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
BRD9-213ENST00000495794 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
BRD9-213ENST00000495794 ABCA10Q8WWZ4 1543 aa17.22■□□□□ 0.35
BRD9-213ENST00000495794 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
BRD9-213ENST00000495794 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
BRD9-213ENST00000495794 MTHFSP49914 203 aa17.22■□□□□ 0.35
BRD9-213ENST00000495794 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
BRD9-213ENST00000495794 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
BRD9-213ENST00000495794 CABP2Q9NPB3 220 aa17.21■□□□□ 0.35
BRD9-213ENST00000495794 GNAI1P63096 354 aa17.2■□□□□ 0.34
BRD9-213ENST00000495794 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
BRD9-213ENST00000495794 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
BRD9-213ENST00000495794 FOXD4L5Q5VV16 416 aaPredicted RBP17.2■□□□□ 0.34
BRD9-213ENST00000495794 FOXD4L4Q8WXT5 416 aaPredicted RBP17.2■□□□□ 0.34
BRD9-213ENST00000495794 KIAA1107Q9UPP5 1409 aa17.2■□□□□ 0.34
BRD9-213ENST00000495794 BIVM-ERCC5R4GMW8 1640 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 ARHGAP5Q13017 1502 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 HMOX1P09601 288 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 EIF2S2P20042 333 aaKnown RBP17.19■□□□□ 0.34
BRD9-213ENST00000495794 TCP11L2Q8N4U5 519 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 DDX49Q9Y6V7 483 aaKnown RBP17.19■□□□□ 0.34
BRD9-213ENST00000495794 GSE1Q14687 1217 aa17.19■□□□□ 0.34
BRD9-213ENST00000495794 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
BRD9-213ENST00000495794 TROQ12816 1431 aaPredicted RBP17.18■□□□□ 0.34
BRD9-213ENST00000495794 REC8O95072 547 aa17.18■□□□□ 0.34
BRD9-213ENST00000495794 AAMPQ13685 434 aa17.18■□□□□ 0.34
BRD9-213ENST00000495794 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
BRD9-213ENST00000495794 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
BRD9-213ENST00000495794 KIF3AQ9Y496 699 aa17.17■□□□□ 0.34
BRD9-213ENST00000495794 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
BRD9-213ENST00000495794 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
BRD9-213ENST00000495794 FKBP5Q13451 457 aaPredicted RBP17.16■□□□□ 0.34
BRD9-213ENST00000495794 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
BRD9-213ENST00000495794 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
BRD9-213ENST00000495794 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
BRD9-213ENST00000495794 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
BRD9-213ENST00000495794 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
BRD9-213ENST00000495794 PHF14O94880 888 aa17.15■□□□□ 0.34
BRD9-213ENST00000495794 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
BRD9-213ENST00000495794 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
BRD9-213ENST00000495794 DIAPH3Q9NSV4 1193 aa17.14■□□□□ 0.33
BRD9-213ENST00000495794 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.332e-9■■□□□ 11.7
BRD9-213ENST00000495794 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
BRD9-213ENST00000495794 ROCK1Q13464 1354 aa17.13■□□□□ 0.33
BRD9-213ENST00000495794 PSME1Q06323 249 aa17.13■□□□□ 0.33
BRD9-213ENST00000495794 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 ATP6V1DQ9Y5K8 247 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 CHMP5Q9NZZ3 219 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 TSPYL4Q9UJ04 414 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 TPM4P67936 248 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
BRD9-213ENST00000495794 GTF2E1P29083 439 aaPredicted RBP17.12■□□□□ 0.33
BRD9-213ENST00000495794 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 RUFY2Q8WXA3 655 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
BRD9-213ENST00000495794 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
BRD9-213ENST00000495794 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
BRD9-213ENST00000495794 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
BRD9-213ENST00000495794 SF3A1Q15459 793 aaKnown RBP17.11■□□□□ 0.33
BRD9-213ENST00000495794 CUL7Q14999 1698 aa17.11■□□□□ 0.33
BRD9-213ENST00000495794 NAIPQ13075 1403 aa17.1■□□□□ 0.33
BRD9-213ENST00000495794 MAP3K1Q13233 1512 aa17.1■□□□□ 0.33
BRD9-213ENST00000495794 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
BRD9-213ENST00000495794 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
BRD9-213ENST00000495794 DAPK1P53355 1430 aa17.09■□□□□ 0.33
BRD9-213ENST00000495794 FRAT2O75474 233 aaPredicted RBP17.09■□□□□ 0.33
BRD9-213ENST00000495794 ZKSCAN1P17029 563 aaPredicted RBP17.09■□□□□ 0.33
BRD9-213ENST00000495794 C22orf23Q9BZE7 217 aa17.09■□□□□ 0.33
BRD9-213ENST00000495794 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
BRD9-213ENST00000495794 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
BRD9-213ENST00000495794 WDR97A6NE52 1622 aa17.08■□□□□ 0.32
BRD9-213ENST00000495794 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
BRD9-213ENST00000495794 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.32
BRD9-213ENST00000495794 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
BRD9-213ENST00000495794 H3BQV1 296 aa17.07■□□□□ 0.32
BRD9-213ENST00000495794 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
BRD9-213ENST00000495794 PLEKHH2Q8IVE3 1493 aa17.07■□□□□ 0.32
BRD9-213ENST00000495794 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
BRD9-213ENST00000495794 SCAPERQ9BY12 1400 aa17.06■□□□□ 0.32
BRD9-213ENST00000495794 NLRP6P59044 892 aa17.06■□□□□ 0.32
BRD9-213ENST00000495794 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
BRD9-213ENST00000495794 CHMP4CQ96CF2 233 aa17.06■□□□□ 0.32
BRD9-213ENST00000495794 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
BRD9-213ENST00000495794 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
BRD9-213ENST00000495794 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms