RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 E2F4Q16254 413 aa12.49□□□□□ -0.41
EPHA4-213ENST00000495693 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
EPHA4-213ENST00000495693 JPH4Q96JJ6 628 aa12.49□□□□□ -0.41
EPHA4-213ENST00000495693 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
EPHA4-213ENST00000495693 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
EPHA4-213ENST00000495693 TROQ12816 1431 aaPredicted RBP12.47□□□□□ -0.41
EPHA4-213ENST00000495693 CDK13Q14004 1512 aaKnown RBP12.47□□□□□ -0.41
EPHA4-213ENST00000495693 MAGI3Q5TCQ9 1506 aa12.47□□□□□ -0.41
EPHA4-213ENST00000495693 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
EPHA4-213ENST00000495693 GCC2Q8IWJ2 1684 aa12.45□□□□□ -0.42
EPHA4-213ENST00000495693 NUDT7P0C024 238 aa12.45□□□□□ -0.42
EPHA4-213ENST00000495693 DIEXFQ68CQ4 756 aaKnown RBP12.45□□□□□ -0.42
EPHA4-213ENST00000495693 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
EPHA4-213ENST00000495693 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
EPHA4-213ENST00000495693 ABCA8O94911 1581 aa12.44□□□□□ -0.42
EPHA4-213ENST00000495693 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
EPHA4-213ENST00000495693 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
EPHA4-213ENST00000495693 KIF14Q15058 1648 aa12.42□□□□□ -0.42
EPHA4-213ENST00000495693 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
EPHA4-213ENST00000495693 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
EPHA4-213ENST00000495693 MAPKBP1O60336 1514 aa12.42□□□□□ -0.42
EPHA4-213ENST00000495693 ERBB3P21860 1342 aa12.41□□□□□ -0.42
EPHA4-213ENST00000495693 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
EPHA4-213ENST00000495693 CHD1O14646 1710 aa12.41□□□□□ -0.42
EPHA4-213ENST00000495693 DNMT1P26358 1616 aaKnown RBP12.4□□□□□ -0.42
EPHA4-213ENST00000495693 NAIPQ13075 1403 aa12.4□□□□□ -0.42
EPHA4-213ENST00000495693 PSDA5PKW4 1024 aaPredicted RBP12.4□□□□□ -0.42
EPHA4-213ENST00000495693 HS3ST6Q96QI5 342 aa12.4□□□□□ -0.42
EPHA4-213ENST00000495693 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
EPHA4-213ENST00000495693 PLEKHD1A6NEE1 506 aa12.39□□□□□ -0.43
EPHA4-213ENST00000495693 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
EPHA4-213ENST00000495693 PLB1Q6P1J6 1458 aa12.39□□□□□ -0.43
EPHA4-213ENST00000495693 PTPRGP23470 1445 aa12.38□□□□□ -0.43
EPHA4-213ENST00000495693 PRG4Q92954 1404 aaPredicted RBP12.38□□□□□ -0.43
EPHA4-213ENST00000495693 EVI5O60447 810 aa12.38□□□□□ -0.43
EPHA4-213ENST00000495693 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
EPHA4-213ENST00000495693 KDM2AQ9Y2K7 1162 aa12.38□□□□□ -0.43
EPHA4-213ENST00000495693 POTEB3A0JP26 581 aa12.37□□□□□ -0.43
EPHA4-213ENST00000495693 DPYSL4O14531 572 aa12.37□□□□□ -0.43
EPHA4-213ENST00000495693 POTEBQ6S5H4 581 aa12.37□□□□□ -0.43
EPHA4-213ENST00000495693 DAPK1P53355 1430 aa12.37□□□□□ -0.43
EPHA4-213ENST00000495693 VARS2Q5ST30 1063 aaKnown RBP12.36□□□□□ -0.43
EPHA4-213ENST00000495693 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
EPHA4-213ENST00000495693 PDIA6Q15084 440 aa12.35□□□□□ -0.43
EPHA4-213ENST00000495693 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
EPHA4-213ENST00000495693 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
EPHA4-213ENST00000495693 ADGBQ8N7X0 1667 aa12.34□□□□□ -0.43
EPHA4-213ENST00000495693 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
EPHA4-213ENST00000495693 SHANK2Q9UPX8 1470 aa12.34□□□□□ -0.43
EPHA4-213ENST00000495693 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.44
EPHA4-213ENST00000495693 ATP10BO94823 1461 aa12.33□□□□□ -0.44
EPHA4-213ENST00000495693 CAMSAP2Q08AD1 1489 aa12.33□□□□□ -0.44
EPHA4-213ENST00000495693 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
EPHA4-213ENST00000495693 TONSLQ96HA7 1378 aa12.32□□□□□ -0.44
EPHA4-213ENST00000495693 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
EPHA4-213ENST00000495693 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
EPHA4-213ENST00000495693 ADGRL2O95490 1459 aa12.32□□□□□ -0.44
EPHA4-213ENST00000495693 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
EPHA4-213ENST00000495693 PTGER2P43116 358 aa12.31□□□□□ -0.44
EPHA4-213ENST00000495693 CROCC2H7BZ55 1655 aa12.31□□□□□ -0.44
EPHA4-213ENST00000495693 CLASP1Q7Z460 1538 aa12.31□□□□□ -0.44
EPHA4-213ENST00000495693 ABCC2Q92887 1545 aa12.31□□□□□ -0.44
EPHA4-213ENST00000495693 ABCC5O15440 1437 aa12.3□□□□□ -0.44
EPHA4-213ENST00000495693 CDAN1Q8IWY9 1227 aa12.3□□□□□ -0.44
EPHA4-213ENST00000495693 ANKRD30AQ9BXX3 1397 aa12.3□□□□□ -0.44
EPHA4-213ENST00000495693 UHRF1BP1LA0JNW5 1464 aa12.29□□□□□ -0.44
EPHA4-213ENST00000495693 ABCC10Q5T3U5 1492 aa12.29□□□□□ -0.44
EPHA4-213ENST00000495693 PLEKHH2Q8IVE3 1493 aa12.28□□□□□ -0.44
EPHA4-213ENST00000495693 ARHGEF5Q12774 1597 aa12.28□□□□□ -0.44
EPHA4-213ENST00000495693 FOSBP53539 338 aa12.28□□□□□ -0.44
EPHA4-213ENST00000495693 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
EPHA4-213ENST00000495693 CDC42BPAQ5VT25 1732 aa12.27□□□□□ -0.45
EPHA4-213ENST00000495693 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
EPHA4-213ENST00000495693 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
EPHA4-213ENST00000495693 PHF14O94880 888 aa12.25□□□□□ -0.45
EPHA4-213ENST00000495693 PBX2P40425 430 aa12.25□□□□□ -0.45
EPHA4-213ENST00000495693 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
EPHA4-213ENST00000495693 RRP7BPQ9NSQ0 103 aa12.24□□□□□ -0.45
EPHA4-213ENST00000495693 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
EPHA4-213ENST00000495693 TSPY4P0CV99 314 aa12.23□□□□□ -0.45
EPHA4-213ENST00000495693 TSPY10P0CW01 314 aa12.23□□□□□ -0.45
EPHA4-213ENST00000495693 ZNF454Q8N9F8 522 aa12.23□□□□□ -0.45
EPHA4-213ENST00000495693 PPP1R15AO75807 674 aaPredicted RBP12.22□□□□□ -0.45
EPHA4-213ENST00000495693 NEUROD1Q13562 356 aa12.22□□□□□ -0.45
EPHA4-213ENST00000495693 CHIC2Q9UKJ5 165 aa12.22□□□□□ -0.45
EPHA4-213ENST00000495693 CCDC141Q6ZP82 1450 aa12.21□□□□□ -0.45
EPHA4-213ENST00000495693 FBXW7Q969H0 707 aa12.21□□□□□ -0.45
EPHA4-213ENST00000495693 EPAS1Q99814 870 aa12.21□□□□□ -0.45
EPHA4-213ENST00000495693 KRTAP3-3Q9BYR6 98 aa12.21□□□□□ -0.45
EPHA4-213ENST00000495693 KRTAP3-2Q9BYR7 98 aa12.21□□□□□ -0.45
EPHA4-213ENST00000495693 PCDHGA10Q9Y5H3 936 aa12.21□□□□□ -0.45
EPHA4-213ENST00000495693 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 MYO5CQ9NQX4 1742 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 MAST1Q9Y2H9 1570 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
EPHA4-213ENST00000495693 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms