RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 PLEKHG1Q9ULL1 1385 aa21.06■□□□□ 0.96
MRPL55-232ENST00000495434 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
MRPL55-232ENST00000495434 ACIN1Q9UKV3 1341 aaKnown RBP21.04■□□□□ 0.96
MRPL55-232ENST00000495434 TOM1O60784 492 aa21.03■□□□□ 0.96
MRPL55-232ENST00000495434 PPP1R15AO75807 674 aaPredicted RBP21.02■□□□□ 0.96
MRPL55-232ENST00000495434 TRPM2O94759 1503 aa21.02■□□□□ 0.96
MRPL55-232ENST00000495434 KCNA6P17658 529 aa21.01■□□□□ 0.95
MRPL55-232ENST00000495434 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
MRPL55-232ENST00000495434 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
MRPL55-232ENST00000495434 BCANQ96GW7 911 aa20.99■□□□□ 0.95
MRPL55-232ENST00000495434 TBX22Q9Y458 520 aa20.98■□□□□ 0.95
MRPL55-232ENST00000495434 CLTCL1P53675 1640 aa20.97■□□□□ 0.95
MRPL55-232ENST00000495434 NWD1Q149M9 1564 aa20.96■□□□□ 0.95
MRPL55-232ENST00000495434 KIF1BO60333 1816 aa20.95■□□□□ 0.94
MRPL55-232ENST00000495434 DIP2AQ14689 1571 aa20.95■□□□□ 0.94
MRPL55-232ENST00000495434 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
MRPL55-232ENST00000495434 CHD2O14647 1828 aaKnown RBP20.94■□□□□ 0.94
MRPL55-232ENST00000495434 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
MRPL55-232ENST00000495434 SETD5Q9C0A6 1442 aa20.94■□□□□ 0.94
MRPL55-232ENST00000495434 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
MRPL55-232ENST00000495434 ADAMTS13Q76LX8 1427 aa20.93■□□□□ 0.94
MRPL55-232ENST00000495434 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
MRPL55-232ENST00000495434 ZNF326Q5BKZ1 582 aaKnown RBP20.92■□□□□ 0.94
MRPL55-232ENST00000495434 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
MRPL55-232ENST00000495434 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
MRPL55-232ENST00000495434 TMEM94Q12767 1356 aa20.9■□□□□ 0.94
MRPL55-232ENST00000495434 PIP4K2BP78356 416 aa20.9■□□□□ 0.94
MRPL55-232ENST00000495434 PROSER2Q86WR7 435 aaPredicted RBP20.9■□□□□ 0.94
MRPL55-232ENST00000495434 SETBP1Q9Y6X0 1596 aa20.89■□□□□ 0.93
MRPL55-232ENST00000495434 NEXMIFQ5QGS0 1516 aa20.88■□□□□ 0.93
MRPL55-232ENST00000495434 SCAF1Q9H7N4 1312 aaKnown RBP20.88■□□□□ 0.93
MRPL55-232ENST00000495434 RPGRIP1LQ68CZ1 1315 aa20.87■□□□□ 0.93
MRPL55-232ENST00000495434 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
MRPL55-232ENST00000495434 NCOA3Q9Y6Q9 1424 aa20.86■□□□□ 0.93
MRPL55-232ENST00000495434 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
MRPL55-232ENST00000495434 VGFO15240 615 aaPredicted RBP20.84■□□□□ 0.93
MRPL55-232ENST00000495434 FOXD1Q16676 465 aa20.84■□□□□ 0.93
MRPL55-232ENST00000495434 RAB3GAP2Q9H2M9 1393 aa20.84■□□□□ 0.93
MRPL55-232ENST00000495434 CCDC144AA2RUR9 1427 aa20.83■□□□□ 0.93
MRPL55-232ENST00000495434 HRCP23327 699 aa20.82■□□□□ 0.92
MRPL55-232ENST00000495434 HSPA1LP34931 641 aa20.82■□□□□ 0.92
MRPL55-232ENST00000495434 MSH6P52701 1360 aa20.81■□□□□ 0.92
MRPL55-232ENST00000495434 AMOTL2Q9Y2J4 779 aa20.8■□□□□ 0.92
MRPL55-232ENST00000495434 PTPRUQ92729 1446 aa20.79■□□□□ 0.92
MRPL55-232ENST00000495434 RBM33Q96EV2 1170 aaKnown RBP20.79■□□□□ 0.92
MRPL55-232ENST00000495434 PPLO60437 1756 aa20.79■□□□□ 0.92
MRPL55-232ENST00000495434 FAM135BQ49AJ0 1406 aa20.78■□□□□ 0.92
MRPL55-232ENST00000495434 SPATA31E1Q6ZUB1 1445 aa20.77■□□□□ 0.91
MRPL55-232ENST00000495434 XRN1Q8IZH2 1706 aaKnown RBP20.76■□□□□ 0.91
MRPL55-232ENST00000495434 METP08581 1390 aa20.76■□□□□ 0.91
MRPL55-232ENST00000495434 C19orf44Q9H6X5 657 aa20.74■□□□□ 0.91
MRPL55-232ENST00000495434 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
MRPL55-232ENST00000495434 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
MRPL55-232ENST00000495434 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
MRPL55-232ENST00000495434 C14orf37Q86TY3 774 aa20.71■□□□□ 0.91
MRPL55-232ENST00000495434 DISP3Q9P2K9 1392 aa20.71■□□□□ 0.91
MRPL55-232ENST00000495434 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.7■□□□□ 0.9
MRPL55-232ENST00000495434 RGL3Q3MIN7 710 aa20.7■□□□□ 0.9
MRPL55-232ENST00000495434 CADPS2Q86UW7 1296 aa20.7■□□□□ 0.9
MRPL55-232ENST00000495434 IFT172Q9UG01 1749 aa20.7■□□□□ 0.9
MRPL55-232ENST00000495434 ROBO1Q9Y6N7 1651 aa20.69■□□□□ 0.9
MRPL55-232ENST00000495434 DCCP43146 1447 aa20.69■□□□□ 0.9
MRPL55-232ENST00000495434 PRAG1Q86YV5 1406 aa20.68■□□□□ 0.9
MRPL55-232ENST00000495434 ATF3P18847 181 aa20.67■□□□□ 0.9
MRPL55-232ENST00000495434 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
MRPL55-232ENST00000495434 PTCH1Q13635 1447 aa20.65■□□□□ 0.9
MRPL55-232ENST00000495434 PIK3C2GO75747 1445 aa20.61■□□□□ 0.89
MRPL55-232ENST00000495434 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
MRPL55-232ENST00000495434 MED1Q15648 1581 aaPredicted RBP20.61■□□□□ 0.89
MRPL55-232ENST00000495434 MYOM2P54296 1465 aa20.6■□□□□ 0.89
MRPL55-232ENST00000495434 NRXN1Q9ULB1 1477 aa20.59■□□□□ 0.89
MRPL55-232ENST00000495434 ROBO2Q9HCK4 1378 aa20.59■□□□□ 0.89
MRPL55-232ENST00000495434 PHLPP1O60346 1717 aa20.57■□□□□ 0.88
MRPL55-232ENST00000495434 NALCNQ8IZF0 1738 aa20.57■□□□□ 0.88
MRPL55-232ENST00000495434 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
MRPL55-232ENST00000495434 TECPR2O15040 1411 aa20.56■□□□□ 0.88
MRPL55-232ENST00000495434 MST1RQ04912 1400 aa20.56■□□□□ 0.88
MRPL55-232ENST00000495434 C14orf93Q9H972 538 aaKnown RBP20.56■□□□□ 0.88
MRPL55-232ENST00000495434 AHDC1Q5TGY3 1603 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-232ENST00000495434 LRPPRCP42704 1394 aaKnown RBP20.55■□□□□ 0.88
MRPL55-232ENST00000495434 ABCC11Q96J66 1382 aa20.55■□□□□ 0.88
MRPL55-232ENST00000495434 LAMC1P11047 1609 aa20.54■□□□□ 0.88
MRPL55-232ENST00000495434 BRINP3Q76B58 766 aa20.54■□□□□ 0.88
MRPL55-232ENST00000495434 KNDC1Q76NI1 1749 aa20.53■□□□□ 0.88
MRPL55-232ENST00000495434 ILDR2Q71H61 639 aa20.52■□□□□ 0.88
MRPL55-232ENST00000495434 COL16A1Q07092 1604 aaPredicted RBP20.52■□□□□ 0.88
MRPL55-232ENST00000495434 ASXL1Q8IXJ9 1541 aa20.52■□□□□ 0.87
MRPL55-232ENST00000495434 SIRT1Q96EB6 747 aa20.51■□□□□ 0.87
MRPL55-232ENST00000495434 JCADQ9P266 1359 aa20.5■□□□□ 0.87
MRPL55-232ENST00000495434 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
MRPL55-232ENST00000495434 YTHDC2Q9H6S0 1430 aaKnown RBP20.5■□□□□ 0.87
MRPL55-232ENST00000495434 STK26Q9P289 416 aa20.49■□□□□ 0.87
MRPL55-232ENST00000495434 C1orf167Q5SNV9 1468 aa20.49■□□□□ 0.87
MRPL55-232ENST00000495434 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
MRPL55-232ENST00000495434 CFAP70Q5T0N1 1121 aa20.48■□□□□ 0.87
MRPL55-232ENST00000495434 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
MRPL55-232ENST00000495434 PHF23Q9BUL5 403 aaPredicted RBP20.47■□□□□ 0.87
MRPL55-232ENST00000495434 CDC42BPGQ6DT37 1551 aa20.46■□□□□ 0.87
MRPL55-232ENST00000495434 NHSL1Q5SYE7 1610 aa20.46■□□□□ 0.87
MRPL55-232ENST00000495434 WAPLQ7Z5K2 1190 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms