RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 SLC26A8Q96RN1 970 aa21.39■■□□□ 1.01
SCAP-213ENST00000494938 HRCP23327 699 aa21.38■■□□□ 1.01
SCAP-213ENST00000494938 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
SCAP-213ENST00000494938 IQGAP1P46940 1657 aa21.35■■□□□ 1.01
SCAP-213ENST00000494938 PPP1R15AO75807 674 aaPredicted RBP21.35■■□□□ 1.01
SCAP-213ENST00000494938 PLEKHG1Q9ULL1 1385 aa21.35■■□□□ 1.01
SCAP-213ENST00000494938 BCANQ96GW7 911 aa21.34■■□□□ 1.01
SCAP-213ENST00000494938 TRPM2O94759 1503 aa21.34■■□□□ 1.01
SCAP-213ENST00000494938 ZNF326Q5BKZ1 582 aaKnown RBP21.33■■□□□ 1.01
SCAP-213ENST00000494938 TBX22Q9Y458 520 aa21.32■■□□□ 1
SCAP-213ENST00000494938 IQSEC2Q5JU85 1478 aa21.32■■□□□ 1
SCAP-213ENST00000494938 KCNA6P17658 529 aa21.31■■□□□ 1
SCAP-213ENST00000494938 SPHKAPQ2M3C7 1700 aa21.3■■□□□ 1
SCAP-213ENST00000494938 CPS1P31327 1500 aa21.29■■□□□ 1
SCAP-213ENST00000494938 CLTCL1P53675 1640 aa21.29■■□□□ 1
SCAP-213ENST00000494938 ADAMTS13Q76LX8 1427 aa21.26■□□□□ 0.99
SCAP-213ENST00000494938 MYO5BQ9ULV0 1848 aa21.25■□□□□ 0.99
SCAP-213ENST00000494938 UBAP1LF5GYI3 381 aa21.25■□□□□ 0.99
SCAP-213ENST00000494938 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
SCAP-213ENST00000494938 LRRC7Q96NW7 1537 aa21.24■□□□□ 0.99
SCAP-213ENST00000494938 CCDC144AA2RUR9 1427 aa21.22■□□□□ 0.99
SCAP-213ENST00000494938 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
SCAP-213ENST00000494938 STRCP1A6NGW2 1772 aa21.21■□□□□ 0.99
SCAP-213ENST00000494938 RGL3Q3MIN7 710 aa21.21■□□□□ 0.99
SCAP-213ENST00000494938 PROSER2Q86WR7 435 aaPredicted RBP21.21■□□□□ 0.99
SCAP-213ENST00000494938 RBM33Q96EV2 1170 aaKnown RBP21.2■□□□□ 0.98
SCAP-213ENST00000494938 ANKRD30BQ9BXX2 1392 aa21.2■□□□□ 0.98
SCAP-213ENST00000494938 SPATA31E1Q6ZUB1 1445 aa21.2■□□□□ 0.98
SCAP-213ENST00000494938 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
SCAP-213ENST00000494938 TOM1O60784 492 aa21.18■□□□□ 0.98
SCAP-213ENST00000494938 TMEM94Q12767 1356 aa21.16■□□□□ 0.98
SCAP-213ENST00000494938 PIK3R4Q99570 1358 aa21.16■□□□□ 0.98
SCAP-213ENST00000494938 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
SCAP-213ENST00000494938 METP08581 1390 aa21.15■□□□□ 0.98
SCAP-213ENST00000494938 PTPRUQ92729 1446 aa21.14■□□□□ 0.98
SCAP-213ENST00000494938 ADGRF5Q8IZF2 1346 aa21.13■□□□□ 0.97
SCAP-213ENST00000494938 PIP4K2BP78356 416 aa21.13■□□□□ 0.97
SCAP-213ENST00000494938 SETBP1Q9Y6X0 1596 aa21.13■□□□□ 0.97
SCAP-213ENST00000494938 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
SCAP-213ENST00000494938 KIF1BO60333 1816 aa21.11■□□□□ 0.97
SCAP-213ENST00000494938 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
SCAP-213ENST00000494938 NKTRP30414 1462 aaKnown RBP21.1■□□□□ 0.97
SCAP-213ENST00000494938 DIP2AQ14689 1571 aa21.1■□□□□ 0.97
SCAP-213ENST00000494938 NRXN3Q9Y4C0 1643 aa21.09■□□□□ 0.97
SCAP-213ENST00000494938 ALKQ9UM73 1620 aa21.08■□□□□ 0.97
SCAP-213ENST00000494938 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
SCAP-213ENST00000494938 CHD2O14647 1828 aaKnown RBP21.05■□□□□ 0.96
SCAP-213ENST00000494938 NCOA3Q9Y6Q9 1424 aa21.04■□□□□ 0.96
SCAP-213ENST00000494938 HSPA1LP34931 641 aa21.03■□□□□ 0.96
SCAP-213ENST00000494938 C19orf44Q9H6X5 657 aa21.02■□□□□ 0.96
SCAP-213ENST00000494938 MSH6P52701 1360 aa21.01■□□□□ 0.95
SCAP-213ENST00000494938 XIRP1Q702N8 1843 aaKnown RBP21■□□□□ 0.95
SCAP-213ENST00000494938 C14orf93Q9H972 538 aaKnown RBP21■□□□□ 0.95
SCAP-213ENST00000494938 SLAIN2Q9P270 581 aa21■□□□□ 0.95
SCAP-213ENST00000494938 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
SCAP-213ENST00000494938 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
SCAP-213ENST00000494938 PPLO60437 1756 aa20.99■□□□□ 0.95
SCAP-213ENST00000494938 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
SCAP-213ENST00000494938 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
SCAP-213ENST00000494938 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
SCAP-213ENST00000494938 KDM2AQ9Y2K7 1162 aa20.98■□□□□ 0.95
SCAP-213ENST00000494938 DHX57Q6P158 1386 aaKnown RBP20.97■□□□□ 0.95
SCAP-213ENST00000494938 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
SCAP-213ENST00000494938 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
SCAP-213ENST00000494938 NRXN1Q9ULB1 1477 aa20.96■□□□□ 0.95
SCAP-213ENST00000494938 CADPS2Q86UW7 1296 aa20.95■□□□□ 0.94
SCAP-213ENST00000494938 STAC3Q96MF2 364 aa20.95■□□□□ 0.94
SCAP-213ENST00000494938 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
SCAP-213ENST00000494938 ATF3P18847 181 aa20.94■□□□□ 0.94
SCAP-213ENST00000494938 STK26Q9P289 416 aa20.94■□□□□ 0.94
SCAP-213ENST00000494938 MYOM2P54296 1465 aa20.93■□□□□ 0.94
SCAP-213ENST00000494938 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
SCAP-213ENST00000494938 LRPPRCP42704 1394 aaKnown RBP20.92■□□□□ 0.94
SCAP-213ENST00000494938 ABCC11Q96J66 1382 aa20.92■□□□□ 0.94
SCAP-213ENST00000494938 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
SCAP-213ENST00000494938 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
SCAP-213ENST00000494938 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
SCAP-213ENST00000494938 IFT172Q9UG01 1749 aa20.91■□□□□ 0.94
SCAP-213ENST00000494938 WAPLQ7Z5K2 1190 aa20.9■□□□□ 0.94
SCAP-213ENST00000494938 SIRT1Q96EB6 747 aa20.89■□□□□ 0.93
SCAP-213ENST00000494938 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
SCAP-213ENST00000494938 TECPR2O15040 1411 aa20.87■□□□□ 0.93
SCAP-213ENST00000494938 YTHDC2Q9H6S0 1430 aaKnown RBP20.87■□□□□ 0.93
SCAP-213ENST00000494938 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
SCAP-213ENST00000494938 DCCP43146 1447 aa20.86■□□□□ 0.93
SCAP-213ENST00000494938 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
SCAP-213ENST00000494938 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.84■□□□□ 0.93
SCAP-213ENST00000494938 L3MBTL2Q969R5 705 aa20.84■□□□□ 0.93
SCAP-213ENST00000494938 PLEKHH1Q9ULM0 1364 aa20.84■□□□□ 0.93
SCAP-213ENST00000494938 BRINP3Q76B58 766 aa20.83■□□□□ 0.93
SCAP-213ENST00000494938 MST1RQ04912 1400 aa20.82■□□□□ 0.92
SCAP-213ENST00000494938 PRAM1Q96QH2 718 aa20.79■□□□□ 0.92
SCAP-213ENST00000494938 TRAK1Q9UPV9 953 aa20.79■□□□□ 0.92
SCAP-213ENST00000494938 ROBO1Q9Y6N7 1651 aa20.78■□□□□ 0.92
SCAP-213ENST00000494938 ADGRB1O14514 1584 aa20.77■□□□□ 0.92
SCAP-213ENST00000494938 NBPF1Q3BBV0 1214 aa20.77■□□□□ 0.92
SCAP-213ENST00000494938 PCGF6Q9BYE7 350 aa20.77■□□□□ 0.92
SCAP-213ENST00000494938 C1orf167Q5SNV9 1468 aa20.76■□□□□ 0.91
SCAP-213ENST00000494938 ORAI2Q96SN7 254 aa20.76■□□□□ 0.91
SCAP-213ENST00000494938 SAFB2Q14151 953 aaKnown RBP eCLIP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms