RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 ZFYVE9O95405 1425 aa26.98■■□□□ 1.91
COL20A1-207ENST00000494913 STRCP1A6NGW2 1772 aa26.97■■□□□ 1.91
COL20A1-207ENST00000494913 SLC4A1APQ9BWU0 796 aaKnown RBP26.95■■□□□ 1.91
COL20A1-207ENST00000494913 NUTM2DQ5VT03 806 aaPredicted RBP26.94■■□□□ 1.9
COL20A1-207ENST00000494913 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.94■■□□□ 1.9
COL20A1-207ENST00000494913 SPHKAPQ2M3C7 1700 aa26.94■■□□□ 1.9
COL20A1-207ENST00000494913 LRRC7Q96NW7 1537 aa26.93■■□□□ 1.9
COL20A1-207ENST00000494913 PLEKHG1Q9ULL1 1385 aa26.92■■□□□ 1.9
COL20A1-207ENST00000494913 TOM1O60784 492 aa26.91■■□□□ 1.9
COL20A1-207ENST00000494913 KCNA6P17658 529 aa26.88■■□□□ 1.89
COL20A1-207ENST00000494913 SCAF1Q9H7N4 1312 aaKnown RBP26.88■■□□□ 1.89
COL20A1-207ENST00000494913 PIP4K2BP78356 416 aa26.87■■□□□ 1.89
COL20A1-207ENST00000494913 ZNF326Q5BKZ1 582 aaKnown RBP26.87■■□□□ 1.89
COL20A1-207ENST00000494913 TRPM2O94759 1503 aa26.86■■□□□ 1.89
COL20A1-207ENST00000494913 FOXD1Q16676 465 aa26.83■■□□□ 1.89
COL20A1-207ENST00000494913 TBX22Q9Y458 520 aa26.83■■□□□ 1.89
COL20A1-207ENST00000494913 CLTCL1P53675 1640 aa26.83■■□□□ 1.89
COL20A1-207ENST00000494913 SETD5Q9C0A6 1442 aa26.81■■□□□ 1.88
COL20A1-207ENST00000494913 PROSER2Q86WR7 435 aaPredicted RBP26.81■■□□□ 1.88
COL20A1-207ENST00000494913 MPHOSPH9Q99550 1183 aa26.81■■□□□ 1.88
COL20A1-207ENST00000494913 TMEM94Q12767 1356 aa26.78■■□□□ 1.88
COL20A1-207ENST00000494913 RBM33Q96EV2 1170 aaKnown RBP26.78■■□□□ 1.88
COL20A1-207ENST00000494913 ADAMTS13Q76LX8 1427 aa26.78■■□□□ 1.88
COL20A1-207ENST00000494913 ACIN1Q9UKV3 1341 aaKnown RBP26.75■■□□□ 1.87
COL20A1-207ENST00000494913 ALKQ9UM73 1620 aa26.75■■□□□ 1.87
COL20A1-207ENST00000494913 KIF1BO60333 1816 aa26.75■■□□□ 1.87
COL20A1-207ENST00000494913 XIRP1Q702N8 1843 aaKnown RBP26.74■■□□□ 1.87
COL20A1-207ENST00000494913 NWD1Q149M9 1564 aa26.74■■□□□ 1.87
COL20A1-207ENST00000494913 NKTRP30414 1462 aaKnown RBP26.73■■□□□ 1.87
COL20A1-207ENST00000494913 CHD2O14647 1828 aaKnown RBP26.72■■□□□ 1.87
COL20A1-207ENST00000494913 HSPA1LP34931 641 aa26.72■■□□□ 1.87
COL20A1-207ENST00000494913 RAB3GAP2Q9H2M9 1393 aa26.72■■□□□ 1.87
COL20A1-207ENST00000494913 DIP2AQ14689 1571 aa26.7■■□□□ 1.87
COL20A1-207ENST00000494913 PIK3R4Q99570 1358 aa26.69■■□□□ 1.86
COL20A1-207ENST00000494913 NEXMIFQ5QGS0 1516 aa26.69■■□□□ 1.86
COL20A1-207ENST00000494913 CCDC144AA2RUR9 1427 aa26.67■■□□□ 1.86
COL20A1-207ENST00000494913 VGFO15240 615 aaPredicted RBP26.67■■□□□ 1.86
COL20A1-207ENST00000494913 AMOTL2Q9Y2J4 779 aa26.67■■□□□ 1.86
COL20A1-207ENST00000494913 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
COL20A1-207ENST00000494913 RPGRIP1LQ68CZ1 1315 aa26.66■■□□□ 1.86
COL20A1-207ENST00000494913 NRXN3Q9Y4C0 1643 aa26.64■■□□□ 1.86
COL20A1-207ENST00000494913 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
COL20A1-207ENST00000494913 MSH6P52701 1360 aa26.63■■□□□ 1.85
COL20A1-207ENST00000494913 RGL3Q3MIN7 710 aa26.62■■□□□ 1.85
COL20A1-207ENST00000494913 C14orf37Q86TY3 774 aa26.62■■□□□ 1.85
COL20A1-207ENST00000494913 METP08581 1390 aa26.61■■□□□ 1.85
COL20A1-207ENST00000494913 NCOA3Q9Y6Q9 1424 aa26.57■■□□□ 1.84
COL20A1-207ENST00000494913 DISP3Q9P2K9 1392 aa26.57■■□□□ 1.84
COL20A1-207ENST00000494913 SPATA31E1Q6ZUB1 1445 aa26.56■■□□□ 1.84
COL20A1-207ENST00000494913 HRCP23327 699 aa26.55■■□□□ 1.84
COL20A1-207ENST00000494913 FAM135BQ49AJ0 1406 aa26.55■■□□□ 1.84
COL20A1-207ENST00000494913 SLAIN2Q9P270 581 aa26.55■■□□□ 1.84
COL20A1-207ENST00000494913 PPLO60437 1756 aa26.54■■□□□ 1.84
COL20A1-207ENST00000494913 C19orf44Q9H6X5 657 aa26.54■■□□□ 1.84
COL20A1-207ENST00000494913 ADGRF5Q8IZF2 1346 aa26.51■■□□□ 1.83
COL20A1-207ENST00000494913 XRN1Q8IZH2 1706 aaKnown RBP26.51■■□□□ 1.83
COL20A1-207ENST00000494913 ATF3P18847 181 aa26.49■■□□□ 1.83
COL20A1-207ENST00000494913 CADPS2Q86UW7 1296 aa26.49■■□□□ 1.83
COL20A1-207ENST00000494913 ANKRD30BQ9BXX2 1392 aa26.48■■□□□ 1.83
COL20A1-207ENST00000494913 ROBO1Q9Y6N7 1651 aa26.46■■□□□ 1.83
COL20A1-207ENST00000494913 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.46■■□□□ 1.83
COL20A1-207ENST00000494913 SETD1AO15047 1707 aaKnown RBP26.44■■□□□ 1.82
COL20A1-207ENST00000494913 IFT172Q9UG01 1749 aa26.41■■□□□ 1.82
COL20A1-207ENST00000494913 ROBO2Q9HCK4 1378 aa26.39■■□□□ 1.82
COL20A1-207ENST00000494913 DCCP43146 1447 aa26.37■■□□□ 1.81
COL20A1-207ENST00000494913 PTCH1Q13635 1447 aa26.37■■□□□ 1.81
COL20A1-207ENST00000494913 PIK3C2GO75747 1445 aa26.36■■□□□ 1.81
COL20A1-207ENST00000494913 ADGRL3Q9HAR2 1447 aa26.36■■□□□ 1.81
COL20A1-207ENST00000494913 TMEM132EQ6IEE7 984 aa26.36■■□□□ 1.81
COL20A1-207ENST00000494913 STK26Q9P289 416 aa26.36■■□□□ 1.81
COL20A1-207ENST00000494913 MED1Q15648 1581 aaPredicted RBP26.35■■□□□ 1.81
COL20A1-207ENST00000494913 ILDR2Q71H61 639 aa26.35■■□□□ 1.81
COL20A1-207ENST00000494913 BRINP3Q76B58 766 aa26.32■■□□□ 1.8
COL20A1-207ENST00000494913 C14orf93Q9H972 538 aaKnown RBP26.32■■□□□ 1.8
COL20A1-207ENST00000494913 PRAG1Q86YV5 1406 aa26.32■■□□□ 1.8
COL20A1-207ENST00000494913 PHLPP1O60346 1717 aa26.3■■□□□ 1.8
COL20A1-207ENST00000494913 NALCNQ8IZF0 1738 aa26.3■■□□□ 1.8
COL20A1-207ENST00000494913 MST1RQ04912 1400 aa26.3■■□□□ 1.8
COL20A1-207ENST00000494913 CFAP70Q5T0N1 1121 aa26.3■■□□□ 1.8
COL20A1-207ENST00000494913 MYOM2P54296 1465 aa26.29■■□□□ 1.8
COL20A1-207ENST00000494913 LRPPRCP42704 1394 aaKnown RBP26.29■■□□□ 1.8
COL20A1-207ENST00000494913 KDM2AQ9Y2K7 1162 aa26.29■■□□□ 1.8
COL20A1-207ENST00000494913 NRXN1Q9ULB1 1477 aa26.29■■□□□ 1.8
COL20A1-207ENST00000494913 DCAF11Q8TEB1 546 aa26.28■■□□□ 1.8
COL20A1-207ENST00000494913 WAPLQ7Z5K2 1190 aa26.27■■□□□ 1.8
COL20A1-207ENST00000494913 PHF23Q9BUL5 403 aaPredicted RBP26.27■■□□□ 1.8
COL20A1-207ENST00000494913 ABCC11Q96J66 1382 aa26.27■■□□□ 1.8
COL20A1-207ENST00000494913 ASXL1Q8IXJ9 1541 aa26.26■■□□□ 1.79
COL20A1-207ENST00000494913 TECPR2O15040 1411 aa26.24■■□□□ 1.79
COL20A1-207ENST00000494913 YTHDC2Q9H6S0 1430 aaKnown RBP26.24■■□□□ 1.79
COL20A1-207ENST00000494913 JCADQ9P266 1359 aa26.23■■□□□ 1.79
COL20A1-207ENST00000494913 COL16A1Q07092 1604 aaPredicted RBP26.22■■□□□ 1.79
COL20A1-207ENST00000494913 AHDC1Q5TGY3 1603 aaPredicted RBP26.22■■□□□ 1.79
COL20A1-207ENST00000494913 DHX57Q6P158 1386 aaKnown RBP26.22■■□□□ 1.79
COL20A1-207ENST00000494913 STAC3Q96MF2 364 aa26.21■■□□□ 1.79
COL20A1-207ENST00000494913 C1orf167Q5SNV9 1468 aa26.2■■□□□ 1.79
COL20A1-207ENST00000494913 PLEKHH1Q9ULM0 1364 aa26.19■■□□□ 1.78
COL20A1-207ENST00000494913 DDX17Q92841 729 aaKnown RBP26.18■■□□□ 1.78
COL20A1-207ENST00000494913 LAMC1P11047 1609 aa26.18■■□□□ 1.78
COL20A1-207ENST00000494913 SIRT1Q96EB6 747 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms