RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 HSP90B1P14625 803 aaKnown RBP5.13□□□□□ -1.59
ATG3-207ENST00000494571 TRAK2O60296 914 aa5.12□□□□□ -1.59
ATG3-207ENST00000494571 FAM43BQ6ZT52 329 aaPredicted RBP5.12□□□□□ -1.59
ATG3-207ENST00000494571 ZSCAN30Q86W11 494 aa5.12□□□□□ -1.59
ATG3-207ENST00000494571 CLGNO14967 610 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 PLIN1O60240 522 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 BECN1Q14457 450 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 TAF3Q5VWG9 929 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 TOPBP1Q92547 1522 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 LOC102724159A0A0B4J2E5 919 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 TNNT3P45378 269 aaPredicted RBP5.11□□□□□ -1.59
ATG3-207ENST00000494571 PWP2Q15269 919 aaKnown RBP5.11□□□□□ -1.59
ATG3-207ENST00000494571 ATP2B3Q16720 1220 aa5.11□□□□□ -1.59
ATG3-207ENST00000494571 CC2D1BQ5T0F9 858 aaKnown RBP5.11□□□□□ -1.59
ATG3-207ENST00000494571 DNAJC2Q99543 621 aaKnown RBP5.11□□□□□ -1.59
ATG3-207ENST00000494571 DYNC1I1O14576 645 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 RRP1P56182 461 aaKnown RBP5.1□□□□□ -1.59
ATG3-207ENST00000494571 FAM161AQ3B820 660 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 MPNDQ8N594 471 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 TMX1Q9H3N1 280 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 MROH2BQ7Z745 1585 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 ERICH4A6NGS2 130 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 TNNT1P13805 278 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 MCM4P33991 863 aa5.1□□□□□ -1.59
ATG3-207ENST00000494571 SYNJ2O15056 1496 aa5.09□□□□□ -1.59
ATG3-207ENST00000494571 PANK3Q9H999 370 aa5.09□□□□□ -1.59
ATG3-207ENST00000494571 PTMAP06454 111 aaKnown RBP5.09□□□□□ -1.6
ATG3-207ENST00000494571 GAS2L3Q86XJ1 694 aa5.09□□□□□ -1.6
ATG3-207ENST00000494571 KIAA0586Q9BVV6 1533 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 PTMSP20962 102 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 PSEN1P49768 467 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 KIF13AQ9H1H9 1805 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 SMG6Q86US8 1419 aaKnown RBP5.08□□□□□ -1.6
ATG3-207ENST00000494571 TOP2BQ02880 1626 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 TNIKQ9UKE5 1360 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 NASPP49321 788 aaPredicted RBP5.08□□□□□ -1.6
ATG3-207ENST00000494571 C8orf34Q49A92 452 aa5.08□□□□□ -1.6
ATG3-207ENST00000494571 BANK1Q8NDB2 785 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 ZNF622Q969S3 477 aaKnown RBP eCLIP5.07□□□□□ -1.63e-6■□□□□ 11.3
ATG3-207ENST00000494571 PRKRIP1Q9H875 184 aaPredicted RBP5.07□□□□□ -1.6
ATG3-207ENST00000494571 CLEC11AQ9Y240 323 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 CCDC9Q9Y3X0 531 aaKnown RBP5.07□□□□□ -1.6
ATG3-207ENST00000494571 TERF1P54274 439 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 SASS6Q6UVJ0 657 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 GPATCH11Q8N954 259 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 CRBNQ96SW2 442 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 RCAN3Q9UKA8 241 aa5.07□□□□□ -1.6
ATG3-207ENST00000494571 GRIN2BQ13224 1484 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 U2AF2P26368 475 aaKnown RBP eCLIP5.06□□□□□ -1.63e-9■■■■■ 27.2
ATG3-207ENST00000494571 RBM25P49756 843 aaKnown RBP5.06□□□□□ -1.6
ATG3-207ENST00000494571 CCDC173Q0VFZ6 552 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 RALBP1Q15311 655 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 TIGD1Q96MW7 591 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 RNF123Q5XPI4 1314 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 NUP160Q12769 1436 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 VGFO15240 615 aaPredicted RBP5.06□□□□□ -1.6
ATG3-207ENST00000494571 LMOD3Q0VAK6 560 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 C20orf194Q5TEA3 1177 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 TOMM22Q9NS69 142 aa5.06□□□□□ -1.6
ATG3-207ENST00000494571 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.06□□□□□ -1.6
ATG3-207ENST00000494571 ABCA5Q8WWZ7 1642 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 CAPN2P17655 700 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 OS9Q13438 667 aaPredicted RBP5.05□□□□□ -1.6
ATG3-207ENST00000494571 TMEM121BQ9BXQ6 578 aaPredicted RBP5.05□□□□□ -1.6
ATG3-207ENST00000494571 METRNQ9UJH8 293 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 RAB3GAP2Q9H2M9 1393 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 IQSEC2Q5JU85 1478 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 POTEJP0CG39 1038 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 MMP14P50281 582 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 ZNF710Q8N1W2 664 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 PDCL2Q8N4E4 241 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 ZNF592Q92610 1267 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 UPF2Q9HAU5 1272 aaKnown RBP5.05□□□□□ -1.6
ATG3-207ENST00000494571 STK26Q9P289 416 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 TONSLQ96HA7 1378 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 ABCC10Q5T3U5 1492 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 PBRM1Q86U86 1689 aa5.05□□□□□ -1.6
ATG3-207ENST00000494571 CCDC66A2RUB6 948 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 NBPF1Q3BBV0 1214 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 AXDND1Q5T1B0 1012 aaPredicted RBP5.04□□□□□ -1.6
ATG3-207ENST00000494571 SEC24BO95487 1268 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 MKRN4PQ13434 485 aaPredicted RBP5.04□□□□□ -1.6
ATG3-207ENST00000494571 FARP1Q9Y4F1 1045 aaPredicted RBP5.04□□□□□ -1.6
ATG3-207ENST00000494571 ZNF608Q9ULD9 1512 aaPredicted RBP5.04□□□□□ -1.6
ATG3-207ENST00000494571 HSPA5P11021 654 aaKnown RBP5.04□□□□□ -1.6
ATG3-207ENST00000494571 GTF2A1P52655 376 aaPredicted RBP5.04□□□□□ -1.6
ATG3-207ENST00000494571 CSPP1Q1MSJ5 1256 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 RGL3Q3MIN7 710 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 PLCD4Q9BRC7 762 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 ANTXR1Q9H6X2 564 aa5.04□□□□□ -1.6
ATG3-207ENST00000494571 DIP2BQ9P265 1576 aa5.03□□□□□ -1.6
ATG3-207ENST00000494571 KTN1Q86UP2 1357 aaKnown RBP5.03□□□□□ -1.6
ATG3-207ENST00000494571 KANK4Q5T7N3 995 aaPredicted RBP5.03□□□□□ -1.6
ATG3-207ENST00000494571 TBC1D2Q9BYX2 928 aa5.03□□□□□ -1.6
ATG3-207ENST00000494571 KDM6BO15054 1643 aa5.03□□□□□ -1.6
ATG3-207ENST00000494571 RSPH14Q9UHP6 348 aa5.03□□□□□ -1.6
ATG3-207ENST00000494571 KIF3AQ9Y496 699 aa5.03□□□□□ -1.6
ATG3-207ENST00000494571 DDX11L8A8MPP1 907 aa5.02□□□□□ -1.61
ATG3-207ENST00000494571 CT47A1Q5JQC4 288 aaPredicted RBP5.02□□□□□ -1.61
ATG3-207ENST00000494571 GEMIN8Q9NWZ8 242 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms