RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 RIMS2Q9UQ26 1411 aa33.77■■■■□ 3
CDKN2A-206ENST00000494262 PPP1R15AO75807 674 aaPredicted RBP33.74■■■□□ 2.99
CDKN2A-206ENST00000494262 HDGFP51858 240 aaKnown RBP33.74■■■□□ 2.99
CDKN2A-206ENST00000494262 SENP3Q9H4L4 574 aaPredicted RBP33.73■■■□□ 2.99
CDKN2A-206ENST00000494262 ALKQ9UM73 1620 aa33.72■■■□□ 2.99
CDKN2A-206ENST00000494262 DISP3Q9P2K9 1392 aa33.71■■■□□ 2.99
CDKN2A-206ENST00000494262 PLEKHG1Q9ULL1 1385 aa33.7■■■□□ 2.98
CDKN2A-206ENST00000494262 KCNA6P17658 529 aa33.69■■■□□ 2.98
CDKN2A-206ENST00000494262 HSPA1LP34931 641 aa33.68■■■□□ 2.98
CDKN2A-206ENST00000494262 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.67■■■□□ 2.98
CDKN2A-206ENST00000494262 HFM1A2PYH4 1435 aa33.67■■■□□ 2.98
CDKN2A-206ENST00000494262 SPHKAPQ2M3C7 1700 aa33.66■■■□□ 2.98
CDKN2A-206ENST00000494262 XIRP1Q702N8 1843 aaKnown RBP33.65■■■□□ 2.98
CDKN2A-206ENST00000494262 NUTM2DQ5VT03 806 aaPredicted RBP33.64■■■□□ 2.98
CDKN2A-206ENST00000494262 TMEM94Q12767 1356 aa33.61■■■□□ 2.97
CDKN2A-206ENST00000494262 TRIM52Q96A61 297 aa33.61■■■□□ 2.97
CDKN2A-206ENST00000494262 PROSER2Q86WR7 435 aaPredicted RBP33.6■■■□□ 2.97
CDKN2A-206ENST00000494262 NWD1Q149M9 1564 aa33.6■■■□□ 2.97
CDKN2A-206ENST00000494262 NKTRP30414 1462 aaKnown RBP33.57■■■□□ 2.97
CDKN2A-206ENST00000494262 RBM33Q96EV2 1170 aaKnown RBP33.56■■■□□ 2.96
CDKN2A-206ENST00000494262 TBX22Q9Y458 520 aa33.55■■■□□ 2.96
CDKN2A-206ENST00000494262 TRPM2O94759 1503 aa33.53■■■□□ 2.96
CDKN2A-206ENST00000494262 ADAMTS13Q76LX8 1427 aa33.53■■■□□ 2.96
CDKN2A-206ENST00000494262 ZNF326Q5BKZ1 582 aaKnown RBP33.52■■■□□ 2.96
CDKN2A-206ENST00000494262 CHD2O14647 1828 aaKnown RBP33.51■■■□□ 2.96
CDKN2A-206ENST00000494262 CLTCL1P53675 1640 aa33.5■■■□□ 2.95
CDKN2A-206ENST00000494262 DIP2AQ14689 1571 aa33.5■■■□□ 2.95
CDKN2A-206ENST00000494262 SLC4A1APQ9BWU0 796 aaKnown RBP33.48■■■□□ 2.95
CDKN2A-206ENST00000494262 ILDR2Q71H61 639 aa33.43■■■□□ 2.94
CDKN2A-206ENST00000494262 MSH6P52701 1360 aa33.43■■■□□ 2.94
CDKN2A-206ENST00000494262 PIK3R4Q99570 1358 aa33.43■■■□□ 2.94
CDKN2A-206ENST00000494262 KIF1BO60333 1816 aa33.4■■■□□ 2.94
CDKN2A-206ENST00000494262 FAM135BQ49AJ0 1406 aa33.39■■■□□ 2.94
CDKN2A-206ENST00000494262 SETBP1Q9Y6X0 1596 aa33.38■■■□□ 2.93
CDKN2A-206ENST00000494262 NRXN3Q9Y4C0 1643 aa33.37■■■□□ 2.93
CDKN2A-206ENST00000494262 MED1Q15648 1581 aaPredicted RBP33.37■■■□□ 2.93
CDKN2A-206ENST00000494262 NEXMIFQ5QGS0 1516 aa33.37■■■□□ 2.93
CDKN2A-206ENST00000494262 C14orf37Q86TY3 774 aa33.34■■■□□ 2.93
CDKN2A-206ENST00000494262 AMOTL2Q9Y2J4 779 aa33.34■■■□□ 2.93
CDKN2A-206ENST00000494262 PTPRUQ92729 1446 aa33.34■■■□□ 2.93
CDKN2A-206ENST00000494262 FOXD1Q16676 465 aa33.33■■■□□ 2.93
CDKN2A-206ENST00000494262 NCOA3Q9Y6Q9 1424 aa33.33■■■□□ 2.93
CDKN2A-206ENST00000494262 ROBO1Q9Y6N7 1651 aa33.31■■■□□ 2.92
CDKN2A-206ENST00000494262 SLAIN2Q9P270 581 aa33.3■■■□□ 2.92
CDKN2A-206ENST00000494262 METP08581 1390 aa33.27■■■□□ 2.92
CDKN2A-206ENST00000494262 MPHOSPH9Q99550 1183 aa33.27■■■□□ 2.92
CDKN2A-206ENST00000494262 XRN1Q8IZH2 1706 aaKnown RBP33.24■■■□□ 2.91
CDKN2A-206ENST00000494262 VGFO15240 615 aaPredicted RBP33.23■■■□□ 2.91
CDKN2A-206ENST00000494262 C19orf44Q9H6X5 657 aa33.23■■■□□ 2.91
CDKN2A-206ENST00000494262 RPGRIP1LQ68CZ1 1315 aa33.23■■■□□ 2.91
CDKN2A-206ENST00000494262 SETD5Q9C0A6 1442 aa33.22■■■□□ 2.91
CDKN2A-206ENST00000494262 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.21■■■□□ 2.91
CDKN2A-206ENST00000494262 ATF3P18847 181 aa33.2■■■□□ 2.91
CDKN2A-206ENST00000494262 CADPS2Q86UW7 1296 aa33.2■■■□□ 2.91
CDKN2A-206ENST00000494262 CCDC144AA2RUR9 1427 aa33.19■■■□□ 2.9
CDKN2A-206ENST00000494262 PHF23Q9BUL5 403 aaPredicted RBP33.19■■■□□ 2.9
CDKN2A-206ENST00000494262 ACIN1Q9UKV3 1341 aaKnown RBP33.17■■■□□ 2.9
CDKN2A-206ENST00000494262 SOCS7O14512 581 aa33.15■■■□□ 2.9
CDKN2A-206ENST00000494262 PPLO60437 1756 aa33.15■■■□□ 2.9
CDKN2A-206ENST00000494262 PHLPP1O60346 1717 aa33.11■■■□□ 2.89
CDKN2A-206ENST00000494262 RAB3GAP2Q9H2M9 1393 aa33.1■■■□□ 2.89
CDKN2A-206ENST00000494262 RGL3Q3MIN7 710 aa33.1■■■□□ 2.89
CDKN2A-206ENST00000494262 SETD1AO15047 1707 aaKnown RBP33.1■■■□□ 2.89
CDKN2A-206ENST00000494262 DCCP43146 1447 aa33.09■■■□□ 2.89
CDKN2A-206ENST00000494262 SPATA31E1Q6ZUB1 1445 aa33.09■■■□□ 2.89
CDKN2A-206ENST00000494262 ADGRF5Q8IZF2 1346 aa33.03■■■□□ 2.88
CDKN2A-206ENST00000494262 ADGRL3Q9HAR2 1447 aa33.03■■■□□ 2.88
CDKN2A-206ENST00000494262 PTCH1Q13635 1447 aa33.02■■■□□ 2.88
CDKN2A-206ENST00000494262 COL16A1Q07092 1604 aaPredicted RBP33.01■■■□□ 2.87
CDKN2A-206ENST00000494262 ANKRD30BQ9BXX2 1392 aa33■■■□□ 2.87
CDKN2A-206ENST00000494262 ROBO2Q9HCK4 1378 aa33■■■□□ 2.87
CDKN2A-206ENST00000494262 JCADQ9P266 1359 aa33■■■□□ 2.87
CDKN2A-206ENST00000494262 BRINP3Q76B58 766 aa33■■■□□ 2.87
CDKN2A-206ENST00000494262 NALCNQ8IZF0 1738 aa32.99■■■□□ 2.87
CDKN2A-206ENST00000494262 MST1RQ04912 1400 aa32.99■■■□□ 2.87
CDKN2A-206ENST00000494262 IFT172Q9UG01 1749 aa32.99■■■□□ 2.87
CDKN2A-206ENST00000494262 AHDC1Q5TGY3 1603 aaPredicted RBP32.99■■■□□ 2.87
CDKN2A-206ENST00000494262 PRAG1Q86YV5 1406 aa32.95■■■□□ 2.87
CDKN2A-206ENST00000494262 ASXL1Q8IXJ9 1541 aa32.94■■■□□ 2.86
CDKN2A-206ENST00000494262 RGS17Q9UGC6 210 aaPredicted RBP32.93■■■□□ 2.86
CDKN2A-206ENST00000494262 PIK3C2GO75747 1445 aa32.89■■■□□ 2.86
CDKN2A-206ENST00000494262 STK26Q9P289 416 aa32.87■■■□□ 2.85
CDKN2A-206ENST00000494262 C1orf167Q5SNV9 1468 aa32.85■■■□□ 2.85
CDKN2A-206ENST00000494262 HRCP23327 699 aa32.84■■■□□ 2.85
CDKN2A-206ENST00000494262 TMEM132EQ6IEE7 984 aa32.84■■■□□ 2.85
CDKN2A-206ENST00000494262 LRPPRCP42704 1394 aaKnown RBP32.83■■■□□ 2.85
CDKN2A-206ENST00000494262 SPATA31A6Q5VVP1 1343 aa32.83■■■□□ 2.85
CDKN2A-206ENST00000494262 NHSL1Q5SYE7 1610 aa32.83■■■□□ 2.85
CDKN2A-206ENST00000494262 SHPRHQ149N8 1683 aa32.82■■■□□ 2.84
CDKN2A-206ENST00000494262 TECPR2O15040 1411 aa32.8■■■□□ 2.84
CDKN2A-206ENST00000494262 DDX17Q92841 729 aaKnown RBP32.8■■■□□ 2.84
CDKN2A-206ENST00000494262 MYOM2P54296 1465 aa32.8■■■□□ 2.84
CDKN2A-206ENST00000494262 LRP6O75581 1613 aa32.79■■■□□ 2.84
CDKN2A-206ENST00000494262 WAPLQ7Z5K2 1190 aa32.78■■■□□ 2.84
CDKN2A-206ENST00000494262 ABCC11Q96J66 1382 aa32.78■■■□□ 2.84
CDKN2A-206ENST00000494262 NRXN1Q9ULB1 1477 aa32.78■■■□□ 2.84
CDKN2A-206ENST00000494262 C14orf93Q9H972 538 aaKnown RBP32.77■■■□□ 2.84
CDKN2A-206ENST00000494262 MEX3CQ5U5Q3 659 aaKnown RBP32.76■■■□□ 2.83
CDKN2A-206ENST00000494262 POTEAQ6S8J7 498 aa32.76■■■□□ 2.83
CDKN2A-206ENST00000494262 YTHDC2Q9H6S0 1430 aaKnown RBP32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms