RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 IQSEC2Q5JU85 1478 aa24.12■■□□□ 1.45
SATB1-217ENST00000493952 CPS1P31327 1500 aa24.11■■□□□ 1.45
SATB1-217ENST00000493952 FBXO41Q8TF61 875 aa24.1■■□□□ 1.45
SATB1-217ENST00000493952 MPHOSPH9Q99550 1183 aa24.07■■□□□ 1.44
SATB1-217ENST00000493952 XIRP1Q702N8 1843 aaKnown RBP24.07■■□□□ 1.44
SATB1-217ENST00000493952 FOXD1Q16676 465 aa24.06■■□□□ 1.44
SATB1-217ENST00000493952 ACIN1Q9UKV3 1341 aaKnown RBP24.06■■□□□ 1.44
SATB1-217ENST00000493952 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
SATB1-217ENST00000493952 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
SATB1-217ENST00000493952 PLEKHG1Q9ULL1 1385 aa24.04■■□□□ 1.44
SATB1-217ENST00000493952 PPLO60437 1756 aa24.03■■□□□ 1.44
SATB1-217ENST00000493952 NRXN3Q9Y4C0 1643 aa24.03■■□□□ 1.44
SATB1-217ENST00000493952 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
SATB1-217ENST00000493952 NWD1Q149M9 1564 aa24.01■■□□□ 1.43
SATB1-217ENST00000493952 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
SATB1-217ENST00000493952 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
SATB1-217ENST00000493952 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.01■■□□□ 1.43
SATB1-217ENST00000493952 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
SATB1-217ENST00000493952 DIP2AQ14689 1571 aa24■■□□□ 1.43
SATB1-217ENST00000493952 SLC26A8Q96RN1 970 aa24■■□□□ 1.43
SATB1-217ENST00000493952 IFT172Q9UG01 1749 aa24■■□□□ 1.43
SATB1-217ENST00000493952 LRRC7Q96NW7 1537 aa23.99■■□□□ 1.43
SATB1-217ENST00000493952 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
SATB1-217ENST00000493952 CCDC144AA2RUR9 1427 aa23.97■■□□□ 1.43
SATB1-217ENST00000493952 BCANQ96GW7 911 aa23.97■■□□□ 1.43
SATB1-217ENST00000493952 SETBP1Q9Y6X0 1596 aa23.97■■□□□ 1.43
SATB1-217ENST00000493952 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
SATB1-217ENST00000493952 SETD1AO15047 1707 aaKnown RBP23.93■■□□□ 1.42
SATB1-217ENST00000493952 HRCP23327 699 aa23.93■■□□□ 1.42
SATB1-217ENST00000493952 NKTRP30414 1462 aaKnown RBP23.91■■□□□ 1.42
SATB1-217ENST00000493952 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
SATB1-217ENST00000493952 SPATA31E1Q6ZUB1 1445 aa23.9■■□□□ 1.42
SATB1-217ENST00000493952 KCNA6P17658 529 aa23.89■■□□□ 1.41
SATB1-217ENST00000493952 TBX22Q9Y458 520 aa23.89■■□□□ 1.41
SATB1-217ENST00000493952 XRN1Q8IZH2 1706 aaKnown RBP23.87■■□□□ 1.41
SATB1-217ENST00000493952 UBAP1LF5GYI3 381 aa23.86■■□□□ 1.41
SATB1-217ENST00000493952 RPGRIP1LQ68CZ1 1315 aa23.84■■□□□ 1.41
SATB1-217ENST00000493952 PIK3R4Q99570 1358 aa23.84■■□□□ 1.41
SATB1-217ENST00000493952 ANKRD30BQ9BXX2 1392 aa23.83■■□□□ 1.41
SATB1-217ENST00000493952 PTPRUQ92729 1446 aa23.82■■□□□ 1.4
SATB1-217ENST00000493952 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
SATB1-217ENST00000493952 VGFO15240 615 aaPredicted RBP23.8■■□□□ 1.4
SATB1-217ENST00000493952 RGL3Q3MIN7 710 aa23.8■■□□□ 1.4
SATB1-217ENST00000493952 PROSER2Q86WR7 435 aaPredicted RBP23.79■■□□□ 1.4
SATB1-217ENST00000493952 METP08581 1390 aa23.78■■□□□ 1.4
SATB1-217ENST00000493952 TOM1O60784 492 aa23.77■■□□□ 1.4
SATB1-217ENST00000493952 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
SATB1-217ENST00000493952 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.74■■□□□ 1.39
SATB1-217ENST00000493952 AMOTL2Q9Y2J4 779 aa23.74■■□□□ 1.39
SATB1-217ENST00000493952 ADGRF5Q8IZF2 1346 aa23.73■■□□□ 1.39
SATB1-217ENST00000493952 MYOM2P54296 1465 aa23.72■■□□□ 1.39
SATB1-217ENST00000493952 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
SATB1-217ENST00000493952 LAMC1P11047 1609 aa23.71■■□□□ 1.39
SATB1-217ENST00000493952 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
SATB1-217ENST00000493952 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
SATB1-217ENST00000493952 PIP4K2BP78356 416 aa23.71■■□□□ 1.39
SATB1-217ENST00000493952 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
SATB1-217ENST00000493952 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
SATB1-217ENST00000493952 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
SATB1-217ENST00000493952 NCOA3Q9Y6Q9 1424 aa23.68■■□□□ 1.38
SATB1-217ENST00000493952 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
SATB1-217ENST00000493952 MSH6P52701 1360 aa23.67■■□□□ 1.38
SATB1-217ENST00000493952 ROBO1Q9Y6N7 1651 aa23.67■■□□□ 1.38
SATB1-217ENST00000493952 PRAG1Q86YV5 1406 aa23.65■■□□□ 1.38
SATB1-217ENST00000493952 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
SATB1-217ENST00000493952 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
SATB1-217ENST00000493952 HSPA1LP34931 641 aa23.59■■□□□ 1.37
SATB1-217ENST00000493952 ROBO2Q9HCK4 1378 aa23.59■■□□□ 1.37
SATB1-217ENST00000493952 DHX57Q6P158 1386 aaKnown RBP23.58■■□□□ 1.37
SATB1-217ENST00000493952 ADGRL3Q9HAR2 1447 aa23.58■■□□□ 1.36
SATB1-217ENST00000493952 C19orf44Q9H6X5 657 aa23.57■■□□□ 1.36
SATB1-217ENST00000493952 FAM135BQ49AJ0 1406 aa23.57■■□□□ 1.36
SATB1-217ENST00000493952 TECPR2O15040 1411 aa23.56■■□□□ 1.36
SATB1-217ENST00000493952 DCCP43146 1447 aa23.56■■□□□ 1.36
SATB1-217ENST00000493952 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
SATB1-217ENST00000493952 DCAF11Q8TEB1 546 aa23.55■■□□□ 1.36
SATB1-217ENST00000493952 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
SATB1-217ENST00000493952 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
SATB1-217ENST00000493952 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
SATB1-217ENST00000493952 YTHDC2Q9H6S0 1430 aaKnown RBP23.54■■□□□ 1.36
SATB1-217ENST00000493952 ADGRB1O14514 1584 aa23.53■■□□□ 1.36
SATB1-217ENST00000493952 CFAP70Q5T0N1 1121 aa23.53■■□□□ 1.36
SATB1-217ENST00000493952 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
SATB1-217ENST00000493952 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
SATB1-217ENST00000493952 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
SATB1-217ENST00000493952 CADPS2Q86UW7 1296 aa23.52■■□□□ 1.36
SATB1-217ENST00000493952 ATF3P18847 181 aa23.51■■□□□ 1.35
SATB1-217ENST00000493952 STK26Q9P289 416 aa23.51■■□□□ 1.35
SATB1-217ENST00000493952 ABCC11Q96J66 1382 aa23.5■■□□□ 1.35
SATB1-217ENST00000493952 MST1RQ04912 1400 aa23.5■■□□□ 1.35
SATB1-217ENST00000493952 CDC42BPGQ6DT37 1551 aa23.48■■□□□ 1.35
SATB1-217ENST00000493952 STAC3Q96MF2 364 aa23.48■■□□□ 1.35
SATB1-217ENST00000493952 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
SATB1-217ENST00000493952 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
SATB1-217ENST00000493952 ARHGEF28Q8N1W1 1705 aaKnown RBP23.47■■□□□ 1.35
SATB1-217ENST00000493952 COL16A1Q07092 1604 aaPredicted RBP23.46■■□□□ 1.35
SATB1-217ENST00000493952 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
SATB1-217ENST00000493952 AHDC1Q5TGY3 1603 aaPredicted RBP23.45■■□□□ 1.34
SATB1-217ENST00000493952 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
SATB1-217ENST00000493952 PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms