RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 NWD1Q149M9 1564 aa19.17■□□□□ 0.66
SAMM50-205ENST00000493621 GCC2Q8IWJ2 1684 aa19.17■□□□□ 0.66
SAMM50-205ENST00000493621 ANKRD50Q9ULJ7 1429 aa19.17■□□□□ 0.66
SAMM50-205ENST00000493621 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
SAMM50-205ENST00000493621 NKTRP30414 1462 aaKnown RBP19.16■□□□□ 0.66
SAMM50-205ENST00000493621 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
SAMM50-205ENST00000493621 CHD2O14647 1828 aaKnown RBP19.13■□□□□ 0.65
SAMM50-205ENST00000493621 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
SAMM50-205ENST00000493621 ZFYVE9O95405 1425 aa19.11■□□□□ 0.65
SAMM50-205ENST00000493621 MSH6P52701 1360 aa19.11■□□□□ 0.65
SAMM50-205ENST00000493621 RIMS2Q9UQ26 1411 aa19.1■□□□□ 0.65
SAMM50-205ENST00000493621 PLEKHG1Q9ULL1 1385 aa19.1■□□□□ 0.65
SAMM50-205ENST00000493621 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
SAMM50-205ENST00000493621 UNC13BO14795 1591 aa19.1■□□□□ 0.65
SAMM50-205ENST00000493621 PHLPP1O60346 1717 aa19.09■□□□□ 0.65
SAMM50-205ENST00000493621 E9PCH4 1651 aa19.08■□□□□ 0.64
SAMM50-205ENST00000493621 CHGAP10645 457 aaKnown RBP19.07■□□□□ 0.64
SAMM50-205ENST00000493621 HDGFP51858 240 aaKnown RBP19.07■□□□□ 0.64
SAMM50-205ENST00000493621 SLAIN2Q9P270 581 aa19.06■□□□□ 0.64
SAMM50-205ENST00000493621 POTEAQ6S8J7 498 aa19.05■□□□□ 0.64
SAMM50-205ENST00000493621 NUTM2DQ5VT03 806 aaPredicted RBP19.03■□□□□ 0.64
SAMM50-205ENST00000493621 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
SAMM50-205ENST00000493621 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
SAMM50-205ENST00000493621 TBX22Q9Y458 520 aa19.02■□□□□ 0.64
SAMM50-205ENST00000493621 C14orf37Q86TY3 774 aa19■□□□□ 0.63
SAMM50-205ENST00000493621 DIP2AQ14689 1571 aa19■□□□□ 0.63
SAMM50-205ENST00000493621 SIPA1L2Q9P2F8 1722 aaPredicted RBP19■□□□□ 0.63
SAMM50-205ENST00000493621 COL16A1Q07092 1604 aaPredicted RBP19■□□□□ 0.63
SAMM50-205ENST00000493621 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
SAMM50-205ENST00000493621 ROCK1Q13464 1354 aa18.99■□□□□ 0.63
SAMM50-205ENST00000493621 JCADQ9P266 1359 aa18.99■□□□□ 0.63
SAMM50-205ENST00000493621 NCOA3Q9Y6Q9 1424 aa18.98■□□□□ 0.63
SAMM50-205ENST00000493621 SETD1AO15047 1707 aaKnown RBP18.96■□□□□ 0.63
SAMM50-205ENST00000493621 TRPM2O94759 1503 aa18.95■□□□□ 0.62
SAMM50-205ENST00000493621 NUP155O75694 1391 aa18.95■□□□□ 0.62
SAMM50-205ENST00000493621 ITGAEP38570 1179 aa18.95■□□□□ 0.62
SAMM50-205ENST00000493621 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
SAMM50-205ENST00000493621 ATF3P18847 181 aa18.93■□□□□ 0.62
SAMM50-205ENST00000493621 CADPS2Q86UW7 1296 aa18.93■□□□□ 0.62
SAMM50-205ENST00000493621 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
SAMM50-205ENST00000493621 SPHKAPQ2M3C7 1700 aa18.92■□□□□ 0.62
SAMM50-205ENST00000493621 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
SAMM50-205ENST00000493621 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
SAMM50-205ENST00000493621 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
SAMM50-205ENST00000493621 LRP6O75581 1613 aa18.91■□□□□ 0.62
SAMM50-205ENST00000493621 SHPRHQ149N8 1683 aa18.91■□□□□ 0.62
SAMM50-205ENST00000493621 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.62
SAMM50-205ENST00000493621 MEX3CQ5U5Q3 659 aaKnown RBP18.89■□□□□ 0.61
SAMM50-205ENST00000493621 SPATA31A6Q5VVP1 1343 aa18.89■□□□□ 0.61
SAMM50-205ENST00000493621 XRN1Q8IZH2 1706 aaKnown RBP18.88■□□□□ 0.61
SAMM50-205ENST00000493621 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
SAMM50-205ENST00000493621 SETBP1Q9Y6X0 1596 aa18.86■□□□□ 0.61
SAMM50-205ENST00000493621 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
SAMM50-205ENST00000493621 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
SAMM50-205ENST00000493621 DCCP43146 1447 aa18.83■□□□□ 0.61
SAMM50-205ENST00000493621 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
SAMM50-205ENST00000493621 ASXL1Q8IXJ9 1541 aa18.82■□□□□ 0.6
SAMM50-205ENST00000493621 CLTCL1P53675 1640 aa18.82■□□□□ 0.6
SAMM50-205ENST00000493621 METP08581 1390 aa18.81■□□□□ 0.6
SAMM50-205ENST00000493621 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
SAMM50-205ENST00000493621 KIF1BO60333 1816 aa18.8■□□□□ 0.6
SAMM50-205ENST00000493621 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
SAMM50-205ENST00000493621 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
SAMM50-205ENST00000493621 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
SAMM50-205ENST00000493621 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
SAMM50-205ENST00000493621 MST1RQ04912 1400 aa18.8■□□□□ 0.6
SAMM50-205ENST00000493621 NEXMIFQ5QGS0 1516 aa18.79■□□□□ 0.6
SAMM50-205ENST00000493621 NALCNQ8IZF0 1738 aa18.78■□□□□ 0.6
SAMM50-205ENST00000493621 SETD5Q9C0A6 1442 aa18.76■□□□□ 0.59
SAMM50-205ENST00000493621 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
SAMM50-205ENST00000493621 RXRBP28702 533 aa18.74■□□□□ 0.59
SAMM50-205ENST00000493621 DDX17Q92841 729 aaKnown RBP18.73■□□□□ 0.59
SAMM50-205ENST00000493621 UPF1Q92900 1129 aaKnown RBP eCLIP18.73■□□□□ 0.59
SAMM50-205ENST00000493621 LRRC59Q96AG4 307 aaKnown RBP18.73■□□□□ 0.59
SAMM50-205ENST00000493621 AFF2P51816 1311 aa18.73■□□□□ 0.59
SAMM50-205ENST00000493621 NAIPQ13075 1403 aa18.71■□□□□ 0.59
SAMM50-205ENST00000493621 PNPLA6Q8IY17 1366 aa18.69■□□□□ 0.58
SAMM50-205ENST00000493621 RRBP1Q9P2E9 1410 aaKnown RBP18.69■□□□□ 0.58
SAMM50-205ENST00000493621 CDK12Q9NYV4 1490 aaPredicted RBP18.69■□□□□ 0.58
SAMM50-205ENST00000493621 C8orf37Q96NL8 207 aa18.68■□□□□ 0.58
SAMM50-205ENST00000493621 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
SAMM50-205ENST00000493621 PTCH1Q13635 1447 aa18.66■□□□□ 0.58
SAMM50-205ENST00000493621 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
SAMM50-205ENST00000493621 PPLO60437 1756 aa18.65■□□□□ 0.58
SAMM50-205ENST00000493621 LAMC1P11047 1609 aa18.65■□□□□ 0.58
SAMM50-205ENST00000493621 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
SAMM50-205ENST00000493621 ORAI2Q96SN7 254 aa18.63■□□□□ 0.57
SAMM50-205ENST00000493621 QTRT2Q9H974 415 aaKnown RBP18.63■□□□□ 0.57
SAMM50-205ENST00000493621 ADAMTS2O95450 1211 aa18.62■□□□□ 0.57
SAMM50-205ENST00000493621 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
SAMM50-205ENST00000493621 RGS12O14924 1447 aa18.62■□□□□ 0.57
SAMM50-205ENST00000493621 RBM6P78332 1123 aaKnown RBP18.61■□□□□ 0.57
SAMM50-205ENST00000493621 NGLY1Q96IV0 654 aa18.61■□□□□ 0.57
SAMM50-205ENST00000493621 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
SAMM50-205ENST00000493621 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
SAMM50-205ENST00000493621 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
SAMM50-205ENST00000493621 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
SAMM50-205ENST00000493621 COL22A1Q8NFW1 1626 aaPredicted RBP18.56■□□□□ 0.56
SAMM50-205ENST00000493621 FOXD1Q16676 465 aa18.55■□□□□ 0.56
SAMM50-205ENST00000493621 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms