RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 RIMS2Q9UQ26 1411 aa14.06□□□□□ -0.16
SGIP1-213ENST00000493564 MYO5BQ9ULV0 1848 aa14.05□□□□□ -0.16
SGIP1-213ENST00000493564 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
SGIP1-213ENST00000493564 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
SGIP1-213ENST00000493564 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.03□□□□□ -0.16
SGIP1-213ENST00000493564 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
SGIP1-213ENST00000493564 KDM5AP29375 1690 aaKnown RBP14.03□□□□□ -0.16
SGIP1-213ENST00000493564 ZFYVE9O95405 1425 aa14.02□□□□□ -0.16
SGIP1-213ENST00000493564 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
SGIP1-213ENST00000493564 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
SGIP1-213ENST00000493564 KCNA6P17658 529 aa13.99□□□□□ -0.17
SGIP1-213ENST00000493564 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
SGIP1-213ENST00000493564 STRCP1A6NGW2 1772 aa13.99□□□□□ -0.17
SGIP1-213ENST00000493564 PLEKHG1Q9ULL1 1385 aa13.98□□□□□ -0.17
SGIP1-213ENST00000493564 CLTCL1P53675 1640 aa13.98□□□□□ -0.17
SGIP1-213ENST00000493564 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
SGIP1-213ENST00000493564 RGL3Q3MIN7 710 aa13.98□□□□□ -0.17
SGIP1-213ENST00000493564 CPS1P31327 1500 aa13.98□□□□□ -0.17
SGIP1-213ENST00000493564 TRPM2O94759 1503 aa13.97□□□□□ -0.17
SGIP1-213ENST00000493564 PROSER2Q86WR7 435 aaPredicted RBP13.97□□□□□ -0.17
SGIP1-213ENST00000493564 TBX22Q9Y458 520 aa13.97□□□□□ -0.17
SGIP1-213ENST00000493564 LRRC7Q96NW7 1537 aa13.95□□□□□ -0.18
SGIP1-213ENST00000493564 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
SGIP1-213ENST00000493564 TOM1O60784 492 aa13.95□□□□□ -0.18
SGIP1-213ENST00000493564 ACIN1Q9UKV3 1341 aaKnown RBP13.94□□□□□ -0.18
SGIP1-213ENST00000493564 ADAMTS13Q76LX8 1427 aa13.93□□□□□ -0.18
SGIP1-213ENST00000493564 KIF1BO60333 1816 aa13.92□□□□□ -0.18
SGIP1-213ENST00000493564 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
SGIP1-213ENST00000493564 AMOTL2Q9Y2J4 779 aa13.92□□□□□ -0.18
SGIP1-213ENST00000493564 TMEM94Q12767 1356 aa13.92□□□□□ -0.18
SGIP1-213ENST00000493564 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
SGIP1-213ENST00000493564 HRCP23327 699 aa13.91□□□□□ -0.18
SGIP1-213ENST00000493564 RPGRIP1LQ68CZ1 1315 aa13.9□□□□□ -0.18
SGIP1-213ENST00000493564 NEXMIFQ5QGS0 1516 aa13.9□□□□□ -0.19
SGIP1-213ENST00000493564 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
SGIP1-213ENST00000493564 METP08581 1390 aa13.88□□□□□ -0.19
SGIP1-213ENST00000493564 PTPRUQ92729 1446 aa13.88□□□□□ -0.19
SGIP1-213ENST00000493564 ADGRF5Q8IZF2 1346 aa13.88□□□□□ -0.19
SGIP1-213ENST00000493564 HSPA1LP34931 641 aa13.87□□□□□ -0.19
SGIP1-213ENST00000493564 ANKRD30BQ9BXX2 1392 aa13.86□□□□□ -0.19
SGIP1-213ENST00000493564 CHD2O14647 1828 aaKnown RBP13.86□□□□□ -0.19
SGIP1-213ENST00000493564 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
SGIP1-213ENST00000493564 SPATA31E1Q6ZUB1 1445 aa13.85□□□□□ -0.19
SGIP1-213ENST00000493564 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
SGIP1-213ENST00000493564 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
SGIP1-213ENST00000493564 KDM2AQ9Y2K7 1162 aa13.84□□□□□ -0.19
SGIP1-213ENST00000493564 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
SGIP1-213ENST00000493564 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.2
SGIP1-213ENST00000493564 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
SGIP1-213ENST00000493564 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
SGIP1-213ENST00000493564 MSH6P52701 1360 aa13.83□□□□□ -0.2
SGIP1-213ENST00000493564 TMEM132EQ6IEE7 984 aa13.82□□□□□ -0.2
SGIP1-213ENST00000493564 DIP2AQ14689 1571 aa13.82□□□□□ -0.2
SGIP1-213ENST00000493564 TRIM26Q12899 539 aaPredicted RBP13.81□□□□□ -0.2
SGIP1-213ENST00000493564 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
SGIP1-213ENST00000493564 STK26Q9P289 416 aa13.81□□□□□ -0.2
SGIP1-213ENST00000493564 PPLO60437 1756 aa13.81□□□□□ -0.2
SGIP1-213ENST00000493564 ATF3P18847 181 aa13.8□□□□□ -0.2
SGIP1-213ENST00000493564 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
SGIP1-213ENST00000493564 C19orf44Q9H6X5 657 aa13.8□□□□□ -0.2
SGIP1-213ENST00000493564 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
SGIP1-213ENST00000493564 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
SGIP1-213ENST00000493564 ROBO2Q9HCK4 1378 aa13.76□□□□□ -0.21
SGIP1-213ENST00000493564 WAPLQ7Z5K2 1190 aa13.76□□□□□ -0.21
SGIP1-213ENST00000493564 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
SGIP1-213ENST00000493564 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
SGIP1-213ENST00000493564 SIN3AQ96ST3 1273 aa13.75□□□□□ -0.21
SGIP1-213ENST00000493564 FAM135BQ49AJ0 1406 aa13.74□□□□□ -0.21
SGIP1-213ENST00000493564 XRN1Q8IZH2 1706 aaKnown RBP13.74□□□□□ -0.21
SGIP1-213ENST00000493564 NEUROD1Q13562 356 aa13.74□□□□□ -0.21
SGIP1-213ENST00000493564 PIK3C2GO75747 1445 aa13.73□□□□□ -0.21
SGIP1-213ENST00000493564 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
SGIP1-213ENST00000493564 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
SGIP1-213ENST00000493564 IFT172Q9UG01 1749 aa13.73□□□□□ -0.21
SGIP1-213ENST00000493564 DHX57Q6P158 1386 aaKnown RBP13.72□□□□□ -0.21
SGIP1-213ENST00000493564 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
SGIP1-213ENST00000493564 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
SGIP1-213ENST00000493564 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
SGIP1-213ENST00000493564 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
SGIP1-213ENST00000493564 PLEKHH1Q9ULM0 1364 aa13.7□□□□□ -0.22
SGIP1-213ENST00000493564 NRXN1Q9ULB1 1477 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 BRINP3Q76B58 766 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 DDX17Q92841 729 aaKnown RBP13.69□□□□□ -0.22
SGIP1-213ENST00000493564 PTCH1Q13635 1447 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 YTHDC2Q9H6S0 1430 aaKnown RBP13.69□□□□□ -0.22
SGIP1-213ENST00000493564 ADGRL3Q9HAR2 1447 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 ASXL1Q8IXJ9 1541 aa13.69□□□□□ -0.22
SGIP1-213ENST00000493564 MYOM2P54296 1465 aa13.68□□□□□ -0.22
SGIP1-213ENST00000493564 TRAK1Q9UPV9 953 aa13.68□□□□□ -0.22
SGIP1-213ENST00000493564 L3MBTL2Q969R5 705 aa13.67□□□□□ -0.22
SGIP1-213ENST00000493564 ORAI2Q96SN7 254 aa13.67□□□□□ -0.22
SGIP1-213ENST00000493564 MST1RQ04912 1400 aa13.66□□□□□ -0.22
SGIP1-213ENST00000493564 PRAM1Q96QH2 718 aa13.66□□□□□ -0.22
SGIP1-213ENST00000493564 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
SGIP1-213ENST00000493564 POGKQ9P215 609 aa13.66□□□□□ -0.22
SGIP1-213ENST00000493564 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
SGIP1-213ENST00000493564 DCCP43146 1447 aa13.64□□□□□ -0.23
SGIP1-213ENST00000493564 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms