RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.89■■□□□ 1.9
GTF3C2-212ENST00000493511 TRPM2O94759 1503 aa26.88■■□□□ 1.89
GTF3C2-212ENST00000493511 SETD5Q9C0A6 1442 aa26.87■■□□□ 1.89
GTF3C2-212ENST00000493511 BCANQ96GW7 911 aa26.86■■□□□ 1.89
GTF3C2-212ENST00000493511 PLEKHG1Q9ULL1 1385 aa26.84■■□□□ 1.89
GTF3C2-212ENST00000493511 SLC26A8Q96RN1 970 aa26.82■■□□□ 1.88
GTF3C2-212ENST00000493511 CLTCL1P53675 1640 aa26.81■■□□□ 1.88
GTF3C2-212ENST00000493511 UBAP1LF5GYI3 381 aa26.8■■□□□ 1.88
GTF3C2-212ENST00000493511 STRCP1A6NGW2 1772 aa26.79■■□□□ 1.88
GTF3C2-212ENST00000493511 ZNF326Q5BKZ1 582 aaKnown RBP26.79■■□□□ 1.88
GTF3C2-212ENST00000493511 MPHOSPH9Q99550 1183 aa26.79■■□□□ 1.88
GTF3C2-212ENST00000493511 LRRC7Q96NW7 1537 aa26.76■■□□□ 1.87
GTF3C2-212ENST00000493511 RAB3GAP2Q9H2M9 1393 aa26.76■■□□□ 1.87
GTF3C2-212ENST00000493511 NUTM2DQ5VT03 806 aaPredicted RBP26.76■■□□□ 1.87
GTF3C2-212ENST00000493511 KIF1BO60333 1816 aa26.75■■□□□ 1.87
GTF3C2-212ENST00000493511 KCNA6P17658 529 aa26.75■■□□□ 1.87
GTF3C2-212ENST00000493511 FOXD1Q16676 465 aa26.74■■□□□ 1.87
GTF3C2-212ENST00000493511 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
GTF3C2-212ENST00000493511 TOM1O60784 492 aa26.72■■□□□ 1.87
GTF3C2-212ENST00000493511 TBX22Q9Y458 520 aa26.72■■□□□ 1.87
GTF3C2-212ENST00000493511 DIP2AQ14689 1571 aa26.7■■□□□ 1.86
GTF3C2-212ENST00000493511 CCDC144AA2RUR9 1427 aa26.69■■□□□ 1.86
GTF3C2-212ENST00000493511 ADAMTS13Q76LX8 1427 aa26.68■■□□□ 1.86
GTF3C2-212ENST00000493511 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
GTF3C2-212ENST00000493511 NWD1Q149M9 1564 aa26.67■■□□□ 1.86
GTF3C2-212ENST00000493511 NEXMIFQ5QGS0 1516 aa26.66■■□□□ 1.86
GTF3C2-212ENST00000493511 HRCP23327 699 aa26.66■■□□□ 1.86
GTF3C2-212ENST00000493511 PIK3R4Q99570 1358 aa26.65■■□□□ 1.86
GTF3C2-212ENST00000493511 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
GTF3C2-212ENST00000493511 PROSER2Q86WR7 435 aaPredicted RBP26.64■■□□□ 1.86
GTF3C2-212ENST00000493511 SETBP1Q9Y6X0 1596 aa26.63■■□□□ 1.85
GTF3C2-212ENST00000493511 TMEM94Q12767 1356 aa26.63■■□□□ 1.85
GTF3C2-212ENST00000493511 SCAF1Q9H7N4 1312 aaKnown RBP26.63■■□□□ 1.85
GTF3C2-212ENST00000493511 CHD2O14647 1828 aaKnown RBP26.62■■□□□ 1.85
GTF3C2-212ENST00000493511 VGFO15240 615 aaPredicted RBP26.62■■□□□ 1.85
GTF3C2-212ENST00000493511 PIP4K2BP78356 416 aa26.61■■□□□ 1.85
GTF3C2-212ENST00000493511 XIRP1Q702N8 1843 aaKnown RBP26.59■■□□□ 1.85
GTF3C2-212ENST00000493511 NRXN3Q9Y4C0 1643 aa26.58■■□□□ 1.85
GTF3C2-212ENST00000493511 SPATA31E1Q6ZUB1 1445 aa26.55■■□□□ 1.84
GTF3C2-212ENST00000493511 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
GTF3C2-212ENST00000493511 RGL3Q3MIN7 710 aa26.53■■□□□ 1.84
GTF3C2-212ENST00000493511 RBM33Q96EV2 1170 aaKnown RBP26.53■■□□□ 1.84
GTF3C2-212ENST00000493511 AMOTL2Q9Y2J4 779 aa26.53■■□□□ 1.84
GTF3C2-212ENST00000493511 PPLO60437 1756 aa26.53■■□□□ 1.84
GTF3C2-212ENST00000493511 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
GTF3C2-212ENST00000493511 MSH6P52701 1360 aa26.51■■□□□ 1.83
GTF3C2-212ENST00000493511 METP08581 1390 aa26.5■■□□□ 1.83
GTF3C2-212ENST00000493511 ANKRD30BQ9BXX2 1392 aa26.5■■□□□ 1.83
GTF3C2-212ENST00000493511 PTPRUQ92729 1446 aa26.49■■□□□ 1.83
GTF3C2-212ENST00000493511 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
GTF3C2-212ENST00000493511 XRN1Q8IZH2 1706 aaKnown RBP26.46■■□□□ 1.83
GTF3C2-212ENST00000493511 HSPA1LP34931 641 aa26.45■■□□□ 1.82
GTF3C2-212ENST00000493511 IFT172Q9UG01 1749 aa26.42■■□□□ 1.82
GTF3C2-212ENST00000493511 ADGRF5Q8IZF2 1346 aa26.41■■□□□ 1.82
GTF3C2-212ENST00000493511 C19orf44Q9H6X5 657 aa26.41■■□□□ 1.82
GTF3C2-212ENST00000493511 FAM135BQ49AJ0 1406 aa26.4■■□□□ 1.82
GTF3C2-212ENST00000493511 SETD1AO15047 1707 aaKnown RBP26.39■■□□□ 1.82
GTF3C2-212ENST00000493511 SLAIN2Q9P270 581 aa26.38■■□□□ 1.81
GTF3C2-212ENST00000493511 ATF3P18847 181 aa26.37■■□□□ 1.81
GTF3C2-212ENST00000493511 CADPS2Q86UW7 1296 aa26.37■■□□□ 1.81
GTF3C2-212ENST00000493511 PIK3C2GO75747 1445 aa26.36■■□□□ 1.81
GTF3C2-212ENST00000493511 PTCH1Q13635 1447 aa26.35■■□□□ 1.81
GTF3C2-212ENST00000493511 MYOM2P54296 1465 aa26.34■■□□□ 1.81
GTF3C2-212ENST00000493511 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
GTF3C2-212ENST00000493511 DCCP43146 1447 aa26.33■■□□□ 1.81
GTF3C2-212ENST00000493511 PRAG1Q86YV5 1406 aa26.33■■□□□ 1.81
GTF3C2-212ENST00000493511 ROBO1Q9Y6N7 1651 aa26.31■■□□□ 1.8
GTF3C2-212ENST00000493511 NRXN1Q9ULB1 1477 aa26.3■■□□□ 1.8
GTF3C2-212ENST00000493511 ADGRL3Q9HAR2 1447 aa26.3■■□□□ 1.8
GTF3C2-212ENST00000493511 ROBO2Q9HCK4 1378 aa26.29■■□□□ 1.8
GTF3C2-212ENST00000493511 STAC3Q96MF2 364 aa26.28■■□□□ 1.8
GTF3C2-212ENST00000493511 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
GTF3C2-212ENST00000493511 LRPPRCP42704 1394 aaKnown RBP26.25■■□□□ 1.79
GTF3C2-212ENST00000493511 TRIM26Q12899 539 aaPredicted RBP26.25■■□□□ 1.79
GTF3C2-212ENST00000493511 LAMC1P11047 1609 aa26.25■■□□□ 1.79
GTF3C2-212ENST00000493511 DISP3Q9P2K9 1392 aa26.24■■□□□ 1.79
GTF3C2-212ENST00000493511 DCAF11Q8TEB1 546 aa26.24■■□□□ 1.79
GTF3C2-212ENST00000493511 TECPR2O15040 1411 aa26.23■■□□□ 1.79
GTF3C2-212ENST00000493511 TMEM132EQ6IEE7 984 aa26.23■■□□□ 1.79
GTF3C2-212ENST00000493511 STK26Q9P289 416 aa26.23■■□□□ 1.79
GTF3C2-212ENST00000493511 NALCNQ8IZF0 1738 aa26.22■■□□□ 1.79
GTF3C2-212ENST00000493511 ABCC11Q96J66 1382 aa26.22■■□□□ 1.79
GTF3C2-212ENST00000493511 ASXL1Q8IXJ9 1541 aa26.22■■□□□ 1.79
GTF3C2-212ENST00000493511 CFAP70Q5T0N1 1121 aa26.21■■□□□ 1.79
GTF3C2-212ENST00000493511 KDM2AQ9Y2K7 1162 aa26.21■■□□□ 1.79
GTF3C2-212ENST00000493511 YTHDC2Q9H6S0 1430 aaKnown RBP26.21■■□□□ 1.79
GTF3C2-212ENST00000493511 DHX57Q6P158 1386 aaKnown RBP26.2■■□□□ 1.78
GTF3C2-212ENST00000493511 MST1RQ04912 1400 aa26.19■■□□□ 1.78
GTF3C2-212ENST00000493511 KNDC1Q76NI1 1749 aa26.17■■□□□ 1.78
GTF3C2-212ENST00000493511 BRINP3Q76B58 766 aa26.16■■□□□ 1.78
GTF3C2-212ENST00000493511 PHLPP1O60346 1717 aa26.15■■□□□ 1.78
GTF3C2-212ENST00000493511 SIRT1Q96EB6 747 aa26.14■■□□□ 1.78
GTF3C2-212ENST00000493511 MED1Q15648 1581 aaPredicted RBP26.13■■□□□ 1.77
GTF3C2-212ENST00000493511 WAPLQ7Z5K2 1190 aa26.13■■□□□ 1.77
GTF3C2-212ENST00000493511 AHDC1Q5TGY3 1603 aaPredicted RBP26.12■■□□□ 1.77
GTF3C2-212ENST00000493511 C1orf167Q5SNV9 1468 aa26.11■■□□□ 1.77
GTF3C2-212ENST00000493511 CDC42BPGQ6DT37 1551 aa26.1■■□□□ 1.77
GTF3C2-212ENST00000493511 ADGRB1O14514 1584 aa26.08■■□□□ 1.77
GTF3C2-212ENST00000493511 COL16A1Q07092 1604 aaPredicted RBP26.08■■□□□ 1.77
GTF3C2-212ENST00000493511 JCADQ9P266 1359 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms