RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 KIF1BO60333 1816 aa15.88■□□□□ 0.13
CDC42SE1-206ENST00000492796 ZNF335Q9H4Z2 1342 aaPredicted RBP15.88■□□□□ 0.13
CDC42SE1-206ENST00000492796 CPS1P31327 1500 aa15.88■□□□□ 0.13
CDC42SE1-206ENST00000492796 RIMS2Q9UQ26 1411 aa15.87■□□□□ 0.13
CDC42SE1-206ENST00000492796 DISP3Q9P2K9 1392 aa15.87■□□□□ 0.13
CDC42SE1-206ENST00000492796 SOCS7O14512 581 aa15.86■□□□□ 0.13
CDC42SE1-206ENST00000492796 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
CDC42SE1-206ENST00000492796 CHGAP10645 457 aaKnown RBP15.85■□□□□ 0.13
CDC42SE1-206ENST00000492796 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDC42SE1-206ENST00000492796 MPHOSPH9Q99550 1183 aa15.84■□□□□ 0.13
CDC42SE1-206ENST00000492796 PLEKHG1Q9ULL1 1385 aa15.84■□□□□ 0.13
CDC42SE1-206ENST00000492796 HRCP23327 699 aa15.83■□□□□ 0.12
CDC42SE1-206ENST00000492796 PPP1R15AO75807 674 aaPredicted RBP15.82■□□□□ 0.12
CDC42SE1-206ENST00000492796 DIP2AQ14689 1571 aa15.82■□□□□ 0.12
CDC42SE1-206ENST00000492796 STRCP1A6NGW2 1772 aa15.82■□□□□ 0.12
CDC42SE1-206ENST00000492796 NEXMIFQ5QGS0 1516 aa15.8■□□□□ 0.12
CDC42SE1-206ENST00000492796 CCDC144AA2RUR9 1427 aa15.8■□□□□ 0.12
CDC42SE1-206ENST00000492796 NWD1Q149M9 1564 aa15.79■□□□□ 0.12
CDC42SE1-206ENST00000492796 FOXD1Q16676 465 aa15.78■□□□□ 0.12
CDC42SE1-206ENST00000492796 ZNF326Q5BKZ1 582 aaKnown RBP15.77■□□□□ 0.12
CDC42SE1-206ENST00000492796 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.11
CDC42SE1-206ENST00000492796 BCANQ96GW7 911 aa15.76■□□□□ 0.11
CDC42SE1-206ENST00000492796 PPLO60437 1756 aa15.76■□□□□ 0.11
CDC42SE1-206ENST00000492796 NRXN3Q9Y4C0 1643 aa15.76■□□□□ 0.11
CDC42SE1-206ENST00000492796 LRRC7Q96NW7 1537 aa15.75■□□□□ 0.11
CDC42SE1-206ENST00000492796 SLC26A8Q96RN1 970 aa15.75■□□□□ 0.11
CDC42SE1-206ENST00000492796 NKTRP30414 1462 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-206ENST00000492796 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
CDC42SE1-206ENST00000492796 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
CDC42SE1-206ENST00000492796 RPGRIP1LQ68CZ1 1315 aa15.73■□□□□ 0.11
CDC42SE1-206ENST00000492796 NUTM2DQ5VT03 806 aaPredicted RBP15.73■□□□□ 0.11
CDC42SE1-206ENST00000492796 TBX22Q9Y458 520 aa15.73■□□□□ 0.11
CDC42SE1-206ENST00000492796 SPATA31E1Q6ZUB1 1445 aa15.73■□□□□ 0.11
CDC42SE1-206ENST00000492796 IFT172Q9UG01 1749 aa15.73■□□□□ 0.11
CDC42SE1-206ENST00000492796 PIK3R4Q99570 1358 aa15.73■□□□□ 0.11
CDC42SE1-206ENST00000492796 KCNA6P17658 529 aa15.72■□□□□ 0.11
CDC42SE1-206ENST00000492796 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.11
CDC42SE1-206ENST00000492796 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
CDC42SE1-206ENST00000492796 ANKRD30BQ9BXX2 1392 aa15.69■□□□□ 0.1
CDC42SE1-206ENST00000492796 SETD1AO15047 1707 aaKnown RBP15.68■□□□□ 0.1
CDC42SE1-206ENST00000492796 SENP3Q9H4L4 574 aaPredicted RBP15.67■□□□□ 0.1
CDC42SE1-206ENST00000492796 XRN1Q8IZH2 1706 aaKnown RBP15.67■□□□□ 0.1
CDC42SE1-206ENST00000492796 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
CDC42SE1-206ENST00000492796 TMEM94Q12767 1356 aa15.65■□□□□ 0.1
CDC42SE1-206ENST00000492796 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
CDC42SE1-206ENST00000492796 ALKQ9UM73 1620 aa15.65■□□□□ 0.1
CDC42SE1-206ENST00000492796 TOM1O60784 492 aa15.64■□□□□ 0.09
CDC42SE1-206ENST00000492796 MYOM2P54296 1465 aa15.64■□□□□ 0.09
CDC42SE1-206ENST00000492796 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
CDC42SE1-206ENST00000492796 NCOA3Q9Y6Q9 1424 aa15.63■□□□□ 0.09
CDC42SE1-206ENST00000492796 RGL3Q3MIN7 710 aa15.63■□□□□ 0.09
CDC42SE1-206ENST00000492796 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
CDC42SE1-206ENST00000492796 METP08581 1390 aa15.62■□□□□ 0.09
CDC42SE1-206ENST00000492796 PIK3C2GO75747 1445 aa15.61■□□□□ 0.09
CDC42SE1-206ENST00000492796 LAMC1P11047 1609 aa15.61■□□□□ 0.09
CDC42SE1-206ENST00000492796 PRAG1Q86YV5 1406 aa15.6■□□□□ 0.09
CDC42SE1-206ENST00000492796 NRXN1Q9ULB1 1477 aa15.6■□□□□ 0.09
CDC42SE1-206ENST00000492796 AMOTL2Q9Y2J4 779 aa15.6■□□□□ 0.09
CDC42SE1-206ENST00000492796 ADGRF5Q8IZF2 1346 aa15.59■□□□□ 0.09
CDC42SE1-206ENST00000492796 MSH6P52701 1360 aa15.59■□□□□ 0.09
CDC42SE1-206ENST00000492796 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
CDC42SE1-206ENST00000492796 KNDC1Q76NI1 1749 aa15.56■□□□□ 0.08
CDC42SE1-206ENST00000492796 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.56■□□□□ 0.08
CDC42SE1-206ENST00000492796 ASXL1Q8IXJ9 1541 aa15.55■□□□□ 0.08
CDC42SE1-206ENST00000492796 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
CDC42SE1-206ENST00000492796 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
CDC42SE1-206ENST00000492796 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
CDC42SE1-206ENST00000492796 DCCP43146 1447 aa15.54■□□□□ 0.08
CDC42SE1-206ENST00000492796 RBM33Q96EV2 1170 aaKnown RBP15.54■□□□□ 0.08
CDC42SE1-206ENST00000492796 NALCNQ8IZF0 1738 aa15.53■□□□□ 0.08
CDC42SE1-206ENST00000492796 TECPR2O15040 1411 aa15.52■□□□□ 0.08
CDC42SE1-206ENST00000492796 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
CDC42SE1-206ENST00000492796 C14orf37Q86TY3 774 aa15.52■□□□□ 0.08
CDC42SE1-206ENST00000492796 C19orf44Q9H6X5 657 aa15.52■□□□□ 0.08
CDC42SE1-206ENST00000492796 FAM135BQ49AJ0 1406 aa15.51■□□□□ 0.07
CDC42SE1-206ENST00000492796 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
CDC42SE1-206ENST00000492796 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
CDC42SE1-206ENST00000492796 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
CDC42SE1-206ENST00000492796 CADPS2Q86UW7 1296 aa15.5■□□□□ 0.07
CDC42SE1-206ENST00000492796 DCAF11Q8TEB1 546 aa15.5■□□□□ 0.07
CDC42SE1-206ENST00000492796 C14orf93Q9H972 538 aaKnown RBP15.5■□□□□ 0.07
CDC42SE1-206ENST00000492796 ROBO2Q9HCK4 1378 aa15.49■□□□□ 0.07
CDC42SE1-206ENST00000492796 YTHDC2Q9H6S0 1430 aaKnown RBP15.49■□□□□ 0.07
CDC42SE1-206ENST00000492796 ABCC11Q96J66 1382 aa15.49■□□□□ 0.07
CDC42SE1-206ENST00000492796 ATF3P18847 181 aa15.48■□□□□ 0.07
CDC42SE1-206ENST00000492796 ADGRB1O14514 1584 aa15.47■□□□□ 0.07
CDC42SE1-206ENST00000492796 KIAA1210Q9ULL0 1709 aa15.47■□□□□ 0.07
CDC42SE1-206ENST00000492796 HSPA1LP34931 641 aa15.46■□□□□ 0.07
CDC42SE1-206ENST00000492796 CFAP70Q5T0N1 1121 aa15.46■□□□□ 0.07
CDC42SE1-206ENST00000492796 SLAIN2Q9P270 581 aa15.46■□□□□ 0.07
CDC42SE1-206ENST00000492796 DLC1Q96QB1 1528 aa15.46■□□□□ 0.07
CDC42SE1-206ENST00000492796 CDC42BPGQ6DT37 1551 aa15.45■□□□□ 0.06
CDC42SE1-206ENST00000492796 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
CDC42SE1-206ENST00000492796 KDM2AQ9Y2K7 1162 aa15.45■□□□□ 0.06
CDC42SE1-206ENST00000492796 MST1RQ04912 1400 aa15.43■□□□□ 0.06
CDC42SE1-206ENST00000492796 SIRT1Q96EB6 747 aa15.43■□□□□ 0.06
CDC42SE1-206ENST00000492796 STK26Q9P289 416 aa15.42■□□□□ 0.06
CDC42SE1-206ENST00000492796 PHLPP1O60346 1717 aa15.42■□□□□ 0.06
CDC42SE1-206ENST00000492796 AHDC1Q5TGY3 1603 aaPredicted RBP15.42■□□□□ 0.06
CDC42SE1-206ENST00000492796 SIN3AQ96ST3 1273 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms