RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 NUP155O75694 1391 aa28.26■■■□□ 2.12
CHD1L-209ENST00000492728 SLC26A8Q96RN1 970 aa28.25■■■□□ 2.11
CHD1L-209ENST00000492728 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
CHD1L-209ENST00000492728 NWD1Q149M9 1564 aa28.21■■■□□ 2.11
CHD1L-209ENST00000492728 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
CHD1L-209ENST00000492728 PLEKHG1Q9ULL1 1385 aa28.18■■■□□ 2.1
CHD1L-209ENST00000492728 TMEM94Q12767 1356 aa28.17■■■□□ 2.1
CHD1L-209ENST00000492728 KCNA6P17658 529 aa28.17■■■□□ 2.1
CHD1L-209ENST00000492728 NAIPQ13075 1403 aa28.15■■■□□ 2.1
CHD1L-209ENST00000492728 MED1Q15648 1581 aaPredicted RBP28.15■■■□□ 2.1
CHD1L-209ENST00000492728 CHGAP10645 457 aaKnown RBP28.14■■■□□ 2.1
CHD1L-209ENST00000492728 RBM33Q96EV2 1170 aaKnown RBP28.14■■■□□ 2.1
CHD1L-209ENST00000492728 NKTRP30414 1462 aaKnown RBP28.14■■■□□ 2.09
CHD1L-209ENST00000492728 NUTM2DQ5VT03 806 aaPredicted RBP28.11■■■□□ 2.09
CHD1L-209ENST00000492728 SPHKAPQ2M3C7 1700 aa28.11■■■□□ 2.09
CHD1L-209ENST00000492728 ADAMTS13Q76LX8 1427 aa28.1■■■□□ 2.09
CHD1L-209ENST00000492728 PPP1R15AO75807 674 aaPredicted RBP28.09■■■□□ 2.09
CHD1L-209ENST00000492728 BCANQ96GW7 911 aa28.09■■■□□ 2.09
CHD1L-209ENST00000492728 CHD2O14647 1828 aaKnown RBP28.08■■■□□ 2.09
CHD1L-209ENST00000492728 PROSER2Q86WR7 435 aaPredicted RBP28.07■■■□□ 2.08
CHD1L-209ENST00000492728 HFM1A2PYH4 1435 aa28.03■■■□□ 2.08
CHD1L-209ENST00000492728 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
CHD1L-209ENST00000492728 CLTCL1P53675 1640 aa28.03■■■□□ 2.08
CHD1L-209ENST00000492728 DIP2AQ14689 1571 aa28.03■■■□□ 2.08
CHD1L-209ENST00000492728 TBX22Q9Y458 520 aa28.02■■■□□ 2.08
CHD1L-209ENST00000492728 HDGFP51858 240 aaKnown RBP28.01■■■□□ 2.07
CHD1L-209ENST00000492728 TRPM2O94759 1503 aa28.01■■■□□ 2.07
CHD1L-209ENST00000492728 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
CHD1L-209ENST00000492728 FAM135BQ49AJ0 1406 aa28■■■□□ 2.07
CHD1L-209ENST00000492728 ROBO1Q9Y6N7 1651 aa27.98■■■□□ 2.07
CHD1L-209ENST00000492728 SOCS7O14512 581 aa27.97■■■□□ 2.07
CHD1L-209ENST00000492728 PTPRUQ92729 1446 aa27.96■■■□□ 2.07
CHD1L-209ENST00000492728 MSH6P52701 1360 aa27.94■■■□□ 2.06
CHD1L-209ENST00000492728 SETBP1Q9Y6X0 1596 aa27.94■■■□□ 2.06
CHD1L-209ENST00000492728 NEXMIFQ5QGS0 1516 aa27.93■■■□□ 2.06
CHD1L-209ENST00000492728 PIK3R4Q99570 1358 aa27.92■■■□□ 2.06
CHD1L-209ENST00000492728 XRN1Q8IZH2 1706 aaKnown RBP27.88■■■□□ 2.05
CHD1L-209ENST00000492728 NCOA3Q9Y6Q9 1424 aa27.87■■■□□ 2.05
CHD1L-209ENST00000492728 ZNF326Q5BKZ1 582 aaKnown RBP27.87■■■□□ 2.05
CHD1L-209ENST00000492728 TRIM52Q96A61 297 aa27.87■■■□□ 2.05
CHD1L-209ENST00000492728 AMOTL2Q9Y2J4 779 aa27.85■■■□□ 2.05
CHD1L-209ENST00000492728 METP08581 1390 aa27.85■■■□□ 2.05
CHD1L-209ENST00000492728 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.84■■■□□ 2.05
CHD1L-209ENST00000492728 SLAIN2Q9P270 581 aa27.84■■■□□ 2.05
CHD1L-209ENST00000492728 KIF1BO60333 1816 aa27.83■■■□□ 2.05
CHD1L-209ENST00000492728 SLC4A1APQ9BWU0 796 aaKnown RBP27.81■■■□□ 2.04
CHD1L-209ENST00000492728 PHF23Q9BUL5 403 aaPredicted RBP27.79■■■□□ 2.04
CHD1L-209ENST00000492728 PHLPP1O60346 1717 aa27.78■■■□□ 2.04
CHD1L-209ENST00000492728 FOXD1Q16676 465 aa27.77■■■□□ 2.04
CHD1L-209ENST00000492728 C14orf37Q86TY3 774 aa27.77■■■□□ 2.04
CHD1L-209ENST00000492728 COL16A1Q07092 1604 aaPredicted RBP27.77■■■□□ 2.04
CHD1L-209ENST00000492728 SETD1AO15047 1707 aaKnown RBP27.76■■■□□ 2.03
CHD1L-209ENST00000492728 C19orf44Q9H6X5 657 aa27.75■■■□□ 2.03
CHD1L-209ENST00000492728 RGS17Q9UGC6 210 aaPredicted RBP27.75■■■□□ 2.03
CHD1L-209ENST00000492728 CADPS2Q86UW7 1296 aa27.71■■■□□ 2.03
CHD1L-209ENST00000492728 PPLO60437 1756 aa27.71■■■□□ 2.03
CHD1L-209ENST00000492728 AHDC1Q5TGY3 1603 aaPredicted RBP27.7■■■□□ 2.03
CHD1L-209ENST00000492728 DCCP43146 1447 aa27.7■■■□□ 2.03
CHD1L-209ENST00000492728 NALCNQ8IZF0 1738 aa27.68■■■□□ 2.02
CHD1L-209ENST00000492728 ATF3P18847 181 aa27.68■■■□□ 2.02
CHD1L-209ENST00000492728 MST1RQ04912 1400 aa27.67■■■□□ 2.02
CHD1L-209ENST00000492728 ADGRL3Q9HAR2 1447 aa27.66■■■□□ 2.02
CHD1L-209ENST00000492728 JCADQ9P266 1359 aa27.65■■■□□ 2.02
CHD1L-209ENST00000492728 BRINP3Q76B58 766 aa27.64■■■□□ 2.02
CHD1L-209ENST00000492728 MPHOSPH9Q99550 1183 aa27.64■■■□□ 2.02
CHD1L-209ENST00000492728 RPGRIP1LQ68CZ1 1315 aa27.64■■■□□ 2.01
CHD1L-209ENST00000492728 ASXL1Q8IXJ9 1541 aa27.63■■■□□ 2.01
CHD1L-209ENST00000492728 VGFO15240 615 aaPredicted RBP27.63■■■□□ 2.01
CHD1L-209ENST00000492728 PTCH1Q13635 1447 aa27.63■■■□□ 2.01
CHD1L-209ENST00000492728 SPATA31E1Q6ZUB1 1445 aa27.63■■■□□ 2.01
CHD1L-209ENST00000492728 ROBO2Q9HCK4 1378 aa27.62■■■□□ 2.01
CHD1L-209ENST00000492728 CCDC144AA2RUR9 1427 aa27.62■■■□□ 2.01
CHD1L-209ENST00000492728 LRP6O75581 1613 aa27.62■■■□□ 2.01
CHD1L-209ENST00000492728 PRAG1Q86YV5 1406 aa27.61■■■□□ 2.01
CHD1L-209ENST00000492728 IFT172Q9UG01 1749 aa27.59■■■□□ 2.01
CHD1L-209ENST00000492728 ADGRF5Q8IZF2 1346 aa27.58■■■□□ 2.01
CHD1L-209ENST00000492728 SETD5Q9C0A6 1442 aa27.58■■■□□ 2
CHD1L-209ENST00000492728 SHPRHQ149N8 1683 aa27.57■■■□□ 2
CHD1L-209ENST00000492728 POTEAQ6S8J7 498 aa27.57■■■□□ 2
CHD1L-209ENST00000492728 NHSL1Q5SYE7 1610 aa27.56■■■□□ 2
CHD1L-209ENST00000492728 RGL3Q3MIN7 710 aa27.53■■■□□ 2
CHD1L-209ENST00000492728 RAB3GAP2Q9H2M9 1393 aa27.51■■□□□ 1.99
CHD1L-209ENST00000492728 C1orf167Q5SNV9 1468 aa27.51■■□□□ 1.99
CHD1L-209ENST00000492728 DDX17Q92841 729 aaKnown RBP27.5■■□□□ 1.99
CHD1L-209ENST00000492728 SPATA31A6Q5VVP1 1343 aa27.49■■□□□ 1.99
CHD1L-209ENST00000492728 PIK3C2GO75747 1445 aa27.48■■□□□ 1.99
CHD1L-209ENST00000492728 ANKRD30BQ9BXX2 1392 aa27.47■■□□□ 1.99
CHD1L-209ENST00000492728 TECPR2O15040 1411 aa27.43■■□□□ 1.98
CHD1L-209ENST00000492728 LAMC1P11047 1609 aa27.43■■□□□ 1.98
CHD1L-209ENST00000492728 CDC42BPGQ6DT37 1551 aa27.41■■□□□ 1.98
CHD1L-209ENST00000492728 ORAI2Q96SN7 254 aa27.41■■□□□ 1.98
CHD1L-209ENST00000492728 NRXN1Q9ULB1 1477 aa27.4■■□□□ 1.98
CHD1L-209ENST00000492728 LRPPRCP42704 1394 aaKnown RBP27.4■■□□□ 1.98
CHD1L-209ENST00000492728 TMEM132EQ6IEE7 984 aa27.4■■□□□ 1.98
CHD1L-209ENST00000492728 KNDC1Q76NI1 1749 aa27.4■■□□□ 1.98
CHD1L-209ENST00000492728 PLEKHH1Q9ULM0 1364 aa27.39■■□□□ 1.98
CHD1L-209ENST00000492728 PNPLA6Q8IY17 1366 aa27.38■■□□□ 1.97
CHD1L-209ENST00000492728 STK26Q9P289 416 aa27.38■■□□□ 1.97
CHD1L-209ENST00000492728 NUTM2BA6NNL0 878 aaPredicted RBP27.37■■□□□ 1.97
CHD1L-209ENST00000492728 NUTM2EB1AL46 878 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms