RNA–Protein interactions for RNA: ENST00000492305.1

TSPAN9-205, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 692 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-205ENST00000492305 IQSEC2Q5JU85 1478 aa17.47■□□□□ 0.39
TSPAN9-205ENST00000492305 TRPM2O94759 1503 aa17.46■□□□□ 0.39
TSPAN9-205ENST00000492305 CPS1P31327 1500 aa17.46■□□□□ 0.39
TSPAN9-205ENST00000492305 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
TSPAN9-205ENST00000492305 TMEM131LA2VDJ0 1609 aa17.45■□□□□ 0.38
TSPAN9-205ENST00000492305 LTKP29376 864 aa17.43■□□□□ 0.38
TSPAN9-205ENST00000492305 TXNDC2Q86VQ3 553 aa17.43■□□□□ 0.38
TSPAN9-205ENST00000492305 CCDC144AA2RUR9 1427 aa17.43■□□□□ 0.38
TSPAN9-205ENST00000492305 CHGAP10645 457 aaKnown RBP17.41■□□□□ 0.38
TSPAN9-205ENST00000492305 EID1Q9Y6B2 187 aa17.41■□□□□ 0.38
TSPAN9-205ENST00000492305 CLTCL1P53675 1640 aa17.39■□□□□ 0.37
TSPAN9-205ENST00000492305 SPATA31E1Q6ZUB1 1445 aa17.38■□□□□ 0.37
TSPAN9-205ENST00000492305 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
TSPAN9-205ENST00000492305 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 SCAF1Q9H7N4 1312 aaKnown RBP17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 ZFYVE9O95405 1425 aa17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
TSPAN9-205ENST00000492305 HDGFP51858 240 aaKnown RBP17.36■□□□□ 0.37
TSPAN9-205ENST00000492305 KIF1BO60333 1816 aa17.35■□□□□ 0.37
TSPAN9-205ENST00000492305 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
TSPAN9-205ENST00000492305 BCANQ96GW7 911 aa17.35■□□□□ 0.37
TSPAN9-205ENST00000492305 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
TSPAN9-205ENST00000492305 NUTM2DQ5VT03 806 aaPredicted RBP17.34■□□□□ 0.37
TSPAN9-205ENST00000492305 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
TSPAN9-205ENST00000492305 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
TSPAN9-205ENST00000492305 SLC26A8Q96RN1 970 aa17.33■□□□□ 0.36
TSPAN9-205ENST00000492305 ZNF326Q5BKZ1 582 aaKnown RBP17.32■□□□□ 0.36
TSPAN9-205ENST00000492305 NWD1Q149M9 1564 aa17.32■□□□□ 0.36
TSPAN9-205ENST00000492305 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
TSPAN9-205ENST00000492305 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
TSPAN9-205ENST00000492305 ALKQ9UM73 1620 aa17.31■□□□□ 0.36
TSPAN9-205ENST00000492305 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
TSPAN9-205ENST00000492305 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
TSPAN9-205ENST00000492305 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
TSPAN9-205ENST00000492305 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
TSPAN9-205ENST00000492305 CHD2O14647 1828 aaKnown RBP17.28■□□□□ 0.36
TSPAN9-205ENST00000492305 DIP2AQ14689 1571 aa17.27■□□□□ 0.35
TSPAN9-205ENST00000492305 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
TSPAN9-205ENST00000492305 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
TSPAN9-205ENST00000492305 NKTRP30414 1462 aaKnown RBP17.25■□□□□ 0.35
TSPAN9-205ENST00000492305 NEXMIFQ5QGS0 1516 aa17.25■□□□□ 0.35
TSPAN9-205ENST00000492305 ADGRF5Q8IZF2 1346 aa17.24■□□□□ 0.35
TSPAN9-205ENST00000492305 TOM1O60784 492 aa17.24■□□□□ 0.35
TSPAN9-205ENST00000492305 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
TSPAN9-205ENST00000492305 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
TSPAN9-205ENST00000492305 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
TSPAN9-205ENST00000492305 TMEM94Q12767 1356 aa17.23■□□□□ 0.35
TSPAN9-205ENST00000492305 ADAMTS13Q76LX8 1427 aa17.22■□□□□ 0.35
TSPAN9-205ENST00000492305 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
TSPAN9-205ENST00000492305 PPLO60437 1756 aa17.22■□□□□ 0.35
TSPAN9-205ENST00000492305 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
TSPAN9-205ENST00000492305 KCNA6P17658 529 aa17.2■□□□□ 0.34
TSPAN9-205ENST00000492305 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
TSPAN9-205ENST00000492305 NRXN1Q9ULB1 1477 aa17.19■□□□□ 0.34
TSPAN9-205ENST00000492305 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
TSPAN9-205ENST00000492305 MYOM2P54296 1465 aa17.18■□□□□ 0.34
TSPAN9-205ENST00000492305 PROSER2Q86WR7 435 aaPredicted RBP17.18■□□□□ 0.34
TSPAN9-205ENST00000492305 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
TSPAN9-205ENST00000492305 ROBO1Q9Y6N7 1651 aa17.17■□□□□ 0.34
TSPAN9-205ENST00000492305 HSPA1LP34931 641 aa17.17■□□□□ 0.34
TSPAN9-205ENST00000492305 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
TSPAN9-205ENST00000492305 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
TSPAN9-205ENST00000492305 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
TSPAN9-205ENST00000492305 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
TSPAN9-205ENST00000492305 PIK3C2GO75747 1445 aa17.15■□□□□ 0.34
TSPAN9-205ENST00000492305 PTPRUQ92729 1446 aa17.14■□□□□ 0.33
TSPAN9-205ENST00000492305 MSH6P52701 1360 aa17.14■□□□□ 0.33
TSPAN9-205ENST00000492305 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
TSPAN9-205ENST00000492305 PIK3R4Q99570 1358 aa17.13■□□□□ 0.33
TSPAN9-205ENST00000492305 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
TSPAN9-205ENST00000492305 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
TSPAN9-205ENST00000492305 C14orf37Q86TY3 774 aa17.12■□□□□ 0.33
TSPAN9-205ENST00000492305 METP08581 1390 aa17.12■□□□□ 0.33
TSPAN9-205ENST00000492305 NALCNQ8IZF0 1738 aa17.11■□□□□ 0.33
TSPAN9-205ENST00000492305 NBPF8Q3BBV2 869 aa17.11■□□□□ 0.33
TSPAN9-205ENST00000492305 PRAG1Q86YV5 1406 aa17.11■□□□□ 0.33
TSPAN9-205ENST00000492305 PHLPP1O60346 1717 aa17.09■□□□□ 0.33
TSPAN9-205ENST00000492305 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
TSPAN9-205ENST00000492305 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
TSPAN9-205ENST00000492305 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
TSPAN9-205ENST00000492305 SIRT1Q96EB6 747 aa17.05■□□□□ 0.32
TSPAN9-205ENST00000492305 ABCC11Q96J66 1382 aa17.04■□□□□ 0.32
TSPAN9-205ENST00000492305 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
TSPAN9-205ENST00000492305 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
TSPAN9-205ENST00000492305 ADGRB1O14514 1584 aa17.01■□□□□ 0.31
TSPAN9-205ENST00000492305 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
TSPAN9-205ENST00000492305 YTHDC2Q9H6S0 1430 aaKnown RBP17■□□□□ 0.31
TSPAN9-205ENST00000492305 NCOA3Q9Y6Q9 1424 aa17■□□□□ 0.31
TSPAN9-205ENST00000492305 GPRASP1Q5JY77 1395 aa17■□□□□ 0.31
TSPAN9-205ENST00000492305 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
TSPAN9-205ENST00000492305 TECPR2O15040 1411 aa16.99■□□□□ 0.31
TSPAN9-205ENST00000492305 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
TSPAN9-205ENST00000492305 ADGRL3Q9HAR2 1447 aa16.99■□□□□ 0.31
TSPAN9-205ENST00000492305 STK26Q9P289 416 aa16.99■□□□□ 0.31
TSPAN9-205ENST00000492305 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
TSPAN9-205ENST00000492305 ATF3P18847 181 aa16.98■□□□□ 0.31
TSPAN9-205ENST00000492305 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms