RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 CERKQ8TCT0 537 aa26.38■■□□□ 1.81
LMNB1-206ENST00000492190 ACIN1Q9UKV3 1341 aaKnown RBP26.36■■□□□ 1.81
LMNB1-206ENST00000492190 HRCP23327 699 aa26.32■■□□□ 1.8
LMNB1-206ENST00000492190 NUTM2DQ5VT03 806 aaPredicted RBP26.31■■□□□ 1.8
LMNB1-206ENST00000492190 SENP3Q9H4L4 574 aaPredicted RBP26.29■■□□□ 1.8
LMNB1-206ENST00000492190 PLEKHG1Q9ULL1 1385 aa26.29■■□□□ 1.8
LMNB1-206ENST00000492190 NEXMIFQ5QGS0 1516 aa26.28■■□□□ 1.8
LMNB1-206ENST00000492190 ILDR1Q86SU0 546 aaPredicted RBP26.26■■□□□ 1.79
LMNB1-206ENST00000492190 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
LMNB1-206ENST00000492190 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.25■■□□□ 1.79
LMNB1-206ENST00000492190 CPS1P31327 1500 aa26.24■■□□□ 1.79
LMNB1-206ENST00000492190 PPP1R15AO75807 674 aaPredicted RBP26.24■■□□□ 1.79
LMNB1-206ENST00000492190 HDGFP51858 240 aaKnown RBP26.24■■□□□ 1.79
LMNB1-206ENST00000492190 ZNF326Q5BKZ1 582 aaKnown RBP26.24■■□□□ 1.79
LMNB1-206ENST00000492190 PPLO60437 1756 aa26.24■■□□□ 1.79
LMNB1-206ENST00000492190 NRXN3Q9Y4C0 1643 aa26.24■■□□□ 1.79
LMNB1-206ENST00000492190 CCDC144AA2RUR9 1427 aa26.23■■□□□ 1.79
LMNB1-206ENST00000492190 IQSEC2Q5JU85 1478 aa26.23■■□□□ 1.79
LMNB1-206ENST00000492190 FBXO41Q8TF61 875 aa26.22■■□□□ 1.79
LMNB1-206ENST00000492190 CHD2O14647 1828 aaKnown RBP26.22■■□□□ 1.79
LMNB1-206ENST00000492190 ADAMTS13Q76LX8 1427 aa26.22■■□□□ 1.79
LMNB1-206ENST00000492190 XIRP1Q702N8 1843 aaKnown RBP26.21■■□□□ 1.79
LMNB1-206ENST00000492190 SPATA31E1Q6ZUB1 1445 aa26.2■■□□□ 1.78
LMNB1-206ENST00000492190 BCANQ96GW7 911 aa26.19■■□□□ 1.78
LMNB1-206ENST00000492190 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
LMNB1-206ENST00000492190 ANKRD30BQ9BXX2 1392 aa26.18■■□□□ 1.78
LMNB1-206ENST00000492190 SETBP1Q9Y6X0 1596 aa26.17■■□□□ 1.78
LMNB1-206ENST00000492190 LRRC7Q96NW7 1537 aa26.17■■□□□ 1.78
LMNB1-206ENST00000492190 NWD1Q149M9 1564 aa26.16■■□□□ 1.78
LMNB1-206ENST00000492190 DIP2AQ14689 1571 aa26.16■■□□□ 1.78
LMNB1-206ENST00000492190 TRIM26Q12899 539 aaPredicted RBP26.14■■□□□ 1.78
LMNB1-206ENST00000492190 TBX22Q9Y458 520 aa26.14■■□□□ 1.78
LMNB1-206ENST00000492190 SETD1AO15047 1707 aaKnown RBP26.12■■□□□ 1.77
LMNB1-206ENST00000492190 KCNA6P17658 529 aa26.12■■□□□ 1.77
LMNB1-206ENST00000492190 RPGRIP1LQ68CZ1 1315 aa26.12■■□□□ 1.77
LMNB1-206ENST00000492190 RGL3Q3MIN7 710 aa26.11■■□□□ 1.77
LMNB1-206ENST00000492190 PTPRUQ92729 1446 aa26.07■■□□□ 1.76
LMNB1-206ENST00000492190 ALKQ9UM73 1620 aa26.06■■□□□ 1.76
LMNB1-206ENST00000492190 NKTRP30414 1462 aaKnown RBP26.06■■□□□ 1.76
LMNB1-206ENST00000492190 VGFO15240 615 aaPredicted RBP26.06■■□□□ 1.76
LMNB1-206ENST00000492190 XRN1Q8IZH2 1706 aaKnown RBP26.04■■□□□ 1.76
LMNB1-206ENST00000492190 METP08581 1390 aa26.04■■□□□ 1.76
LMNB1-206ENST00000492190 PIK3R4Q99570 1358 aa26.04■■□□□ 1.76
LMNB1-206ENST00000492190 ADGRF5Q8IZF2 1346 aa26.03■■□□□ 1.76
LMNB1-206ENST00000492190 RBM33Q96EV2 1170 aaKnown RBP26.02■■□□□ 1.76
LMNB1-206ENST00000492190 UBAP1LF5GYI3 381 aa26.01■■□□□ 1.75
LMNB1-206ENST00000492190 TMEM94Q12767 1356 aa26.01■■□□□ 1.75
LMNB1-206ENST00000492190 PROSER2Q86WR7 435 aaPredicted RBP26■■□□□ 1.75
LMNB1-206ENST00000492190 AMOTL2Q9Y2J4 779 aa25.97■■□□□ 1.75
LMNB1-206ENST00000492190 NRXN1Q9ULB1 1477 aa25.95■■□□□ 1.74
LMNB1-206ENST00000492190 PIK3C2GO75747 1445 aa25.95■■□□□ 1.74
LMNB1-206ENST00000492190 MYOM2P54296 1465 aa25.94■■□□□ 1.74
LMNB1-206ENST00000492190 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
LMNB1-206ENST00000492190 ASXL1Q8IXJ9 1541 aa25.92■■□□□ 1.74
LMNB1-206ENST00000492190 TOM1O60784 492 aa25.91■■□□□ 1.74
LMNB1-206ENST00000492190 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
LMNB1-206ENST00000492190 PIP4K2BP78356 416 aa25.87■■□□□ 1.73
LMNB1-206ENST00000492190 NCOA3Q9Y6Q9 1424 aa25.86■■□□□ 1.73
LMNB1-206ENST00000492190 LAMC1P11047 1609 aa25.85■■□□□ 1.73
LMNB1-206ENST00000492190 PRAG1Q86YV5 1406 aa25.84■■□□□ 1.73
LMNB1-206ENST00000492190 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
LMNB1-206ENST00000492190 DCAF11Q8TEB1 546 aa25.84■■□□□ 1.73
LMNB1-206ENST00000492190 SIN3AQ96ST3 1273 aa25.83■■□□□ 1.73
LMNB1-206ENST00000492190 C14orf93Q9H972 538 aaKnown RBP25.83■■□□□ 1.73
LMNB1-206ENST00000492190 KDM2AQ9Y2K7 1162 aa25.83■■□□□ 1.73
LMNB1-206ENST00000492190 SCAF1Q9H7N4 1312 aaKnown RBP25.83■■□□□ 1.73
LMNB1-206ENST00000492190 MSH6P52701 1360 aa25.82■■□□□ 1.72
LMNB1-206ENST00000492190 ROBO2Q9HCK4 1378 aa25.82■■□□□ 1.72
LMNB1-206ENST00000492190 PTCH1Q13635 1447 aa25.82■■□□□ 1.72
LMNB1-206ENST00000492190 TMEM132EQ6IEE7 984 aa25.82■■□□□ 1.72
LMNB1-206ENST00000492190 KNDC1Q76NI1 1749 aa25.82■■□□□ 1.72
LMNB1-206ENST00000492190 CFAP70Q5T0N1 1121 aa25.81■■□□□ 1.72
LMNB1-206ENST00000492190 C14orf37Q86TY3 774 aa25.78■■□□□ 1.72
LMNB1-206ENST00000492190 LRPPRCP42704 1394 aaKnown RBP25.78■■□□□ 1.72
LMNB1-206ENST00000492190 C19orf44Q9H6X5 657 aa25.77■■□□□ 1.72
LMNB1-206ENST00000492190 TECPR2O15040 1411 aa25.77■■□□□ 1.72
LMNB1-206ENST00000492190 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
LMNB1-206ENST00000492190 PCGF6Q9BYE7 350 aa25.76■■□□□ 1.71
LMNB1-206ENST00000492190 YTHDC2Q9H6S0 1430 aaKnown RBP25.76■■□□□ 1.71
LMNB1-206ENST00000492190 ADGRB1O14514 1584 aa25.76■■□□□ 1.71
LMNB1-206ENST00000492190 ADGRL3Q9HAR2 1447 aa25.75■■□□□ 1.71
LMNB1-206ENST00000492190 STK26Q9P289 416 aa25.75■■□□□ 1.71
LMNB1-206ENST00000492190 ABCC11Q96J66 1382 aa25.74■■□□□ 1.71
LMNB1-206ENST00000492190 STAC3Q96MF2 364 aa25.74■■□□□ 1.71
LMNB1-206ENST00000492190 HSPA1LP34931 641 aa25.73■■□□□ 1.71
LMNB1-206ENST00000492190 FAM135BQ49AJ0 1406 aa25.72■■□□□ 1.71
LMNB1-206ENST00000492190 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
LMNB1-206ENST00000492190 SLAIN2Q9P270 581 aa25.71■■□□□ 1.71
LMNB1-206ENST00000492190 DCCP43146 1447 aa25.71■■□□□ 1.71
LMNB1-206ENST00000492190 L3MBTL2Q969R5 705 aa25.7■■□□□ 1.7
LMNB1-206ENST00000492190 KIAA1210Q9ULL0 1709 aa25.7■■□□□ 1.7
LMNB1-206ENST00000492190 PLEKHH1Q9ULM0 1364 aa25.69■■□□□ 1.7
LMNB1-206ENST00000492190 ATF3P18847 181 aa25.68■■□□□ 1.7
LMNB1-206ENST00000492190 WAPLQ7Z5K2 1190 aa25.68■■□□□ 1.7
LMNB1-206ENST00000492190 CADPS2Q86UW7 1296 aa25.68■■□□□ 1.7
LMNB1-206ENST00000492190 MST1RQ04912 1400 aa25.66■■□□□ 1.7
LMNB1-206ENST00000492190 DLC1Q96QB1 1528 aa25.64■■□□□ 1.7
LMNB1-206ENST00000492190 SIRT1Q96EB6 747 aa25.62■■□□□ 1.69
LMNB1-206ENST00000492190 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
LMNB1-206ENST00000492190 CDC42BPGQ6DT37 1551 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms