RNA–Protein interactions for RNA: ENST00000491765.5

COPS9-204, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 619 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-204ENST00000491765 IDI1Q13907 227 aa16.54■□□□□ 0.24
COPS9-204ENST00000491765 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
COPS9-204ENST00000491765 TRPM2O94759 1503 aa16.54■□□□□ 0.24
COPS9-204ENST00000491765 TMEM2Q9UHN6 1383 aa16.52■□□□□ 0.24
COPS9-204ENST00000491765 ZFYVE9O95405 1425 aa16.52■□□□□ 0.23
COPS9-204ENST00000491765 RBM33Q96EV2 1170 aaKnown RBP16.5■□□□□ 0.23
COPS9-204ENST00000491765 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
COPS9-204ENST00000491765 XIRP1Q702N8 1843 aaKnown RBP16.48■□□□□ 0.23
COPS9-204ENST00000491765 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
COPS9-204ENST00000491765 RAB3GAP2Q9H2M9 1393 aa16.48■□□□□ 0.23
COPS9-204ENST00000491765 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
COPS9-204ENST00000491765 EID1Q9Y6B2 187 aa16.47■□□□□ 0.23
COPS9-204ENST00000491765 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
COPS9-204ENST00000491765 TMEM94Q12767 1356 aa16.43■□□□□ 0.22
COPS9-204ENST00000491765 SLC52A1Q9NWF4 448 aa16.43■□□□□ 0.22
COPS9-204ENST00000491765 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
COPS9-204ENST00000491765 KIF1BO60333 1816 aa16.42■□□□□ 0.22
COPS9-204ENST00000491765 IFT172Q9UG01 1749 aa16.41■□□□□ 0.22
COPS9-204ENST00000491765 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
COPS9-204ENST00000491765 KCNA6P17658 529 aa16.4■□□□□ 0.22
COPS9-204ENST00000491765 SETD1AO15047 1707 aaKnown RBP16.39■□□□□ 0.21
COPS9-204ENST00000491765 FOXD1Q16676 465 aa16.39■□□□□ 0.21
COPS9-204ENST00000491765 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
COPS9-204ENST00000491765 NWD1Q149M9 1564 aa16.38■□□□□ 0.21
COPS9-204ENST00000491765 PPLO60437 1756 aa16.38■□□□□ 0.21
COPS9-204ENST00000491765 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
COPS9-204ENST00000491765 PROSER2Q86WR7 435 aaPredicted RBP16.38■□□□□ 0.21
COPS9-204ENST00000491765 TRIM52Q96A61 297 aa16.37■□□□□ 0.21
COPS9-204ENST00000491765 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
COPS9-204ENST00000491765 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
COPS9-204ENST00000491765 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
COPS9-204ENST00000491765 MPHOSPH9Q99550 1183 aa16.36■□□□□ 0.21
COPS9-204ENST00000491765 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
COPS9-204ENST00000491765 SPATA31E1Q6ZUB1 1445 aa16.36■□□□□ 0.21
COPS9-204ENST00000491765 BCANQ96GW7 911 aa16.35■□□□□ 0.21
COPS9-204ENST00000491765 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
COPS9-204ENST00000491765 PLEKHG1Q9ULL1 1385 aa16.35■□□□□ 0.21
COPS9-204ENST00000491765 FAM135BQ49AJ0 1406 aa16.35■□□□□ 0.21
COPS9-204ENST00000491765 CHGAP10645 457 aaKnown RBP16.33■□□□□ 0.2
COPS9-204ENST00000491765 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
COPS9-204ENST00000491765 HRCP23327 699 aa16.31■□□□□ 0.2
COPS9-204ENST00000491765 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
COPS9-204ENST00000491765 ROBO1Q9Y6N7 1651 aa16.3■□□□□ 0.2
COPS9-204ENST00000491765 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
COPS9-204ENST00000491765 ANKRD30BQ9BXX2 1392 aa16.29■□□□□ 0.2
COPS9-204ENST00000491765 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
COPS9-204ENST00000491765 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
COPS9-204ENST00000491765 POTEAQ6S8J7 498 aa16.27■□□□□ 0.2
COPS9-204ENST00000491765 ASXL1Q8IXJ9 1541 aa16.26■□□□□ 0.19
COPS9-204ENST00000491765 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
COPS9-204ENST00000491765 TBX22Q9Y458 520 aa16.26■□□□□ 0.19
COPS9-204ENST00000491765 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
COPS9-204ENST00000491765 MSH6P52701 1360 aa16.26■□□□□ 0.19
COPS9-204ENST00000491765 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
COPS9-204ENST00000491765 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
COPS9-204ENST00000491765 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.21■□□□□ 0.19
COPS9-204ENST00000491765 METP08581 1390 aa16.21■□□□□ 0.19
COPS9-204ENST00000491765 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
COPS9-204ENST00000491765 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
COPS9-204ENST00000491765 MYOM2P54296 1465 aa16.19■□□□□ 0.18
COPS9-204ENST00000491765 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
COPS9-204ENST00000491765 PHLPP1O60346 1717 aa16.19■□□□□ 0.18
COPS9-204ENST00000491765 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
COPS9-204ENST00000491765 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
COPS9-204ENST00000491765 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
COPS9-204ENST00000491765 COL16A1Q07092 1604 aaPredicted RBP16.18■□□□□ 0.18
COPS9-204ENST00000491765 ADGRF5Q8IZF2 1346 aa16.18■□□□□ 0.18
COPS9-204ENST00000491765 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
COPS9-204ENST00000491765 LRP6O75581 1613 aa16.16■□□□□ 0.18
COPS9-204ENST00000491765 DHX57Q6P158 1386 aaKnown RBP16.16■□□□□ 0.18
COPS9-204ENST00000491765 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
COPS9-204ENST00000491765 RPGRIP1LQ68CZ1 1315 aa16.16■□□□□ 0.18
COPS9-204ENST00000491765 JCADQ9P266 1359 aa16.15■□□□□ 0.18
COPS9-204ENST00000491765 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
COPS9-204ENST00000491765 KNDC1Q76NI1 1749 aa16.15■□□□□ 0.18
COPS9-204ENST00000491765 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
COPS9-204ENST00000491765 NCOA3Q9Y6Q9 1424 aa16.14■□□□□ 0.17
COPS9-204ENST00000491765 LAMC1P11047 1609 aa16.13■□□□□ 0.17
COPS9-204ENST00000491765 TRIM26Q12899 539 aaPredicted RBP16.13■□□□□ 0.17
COPS9-204ENST00000491765 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
COPS9-204ENST00000491765 ATF3P18847 181 aa16.12■□□□□ 0.17
COPS9-204ENST00000491765 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
COPS9-204ENST00000491765 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
COPS9-204ENST00000491765 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
COPS9-204ENST00000491765 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
COPS9-204ENST00000491765 RGL3Q3MIN7 710 aa16.1■□□□□ 0.17
COPS9-204ENST00000491765 PTCH1Q13635 1447 aa16.1■□□□□ 0.17
COPS9-204ENST00000491765 TECPR2O15040 1411 aa16.09■□□□□ 0.17
COPS9-204ENST00000491765 VGFO15240 615 aaPredicted RBP16.08■□□□□ 0.16
COPS9-204ENST00000491765 ROBO2Q9HCK4 1378 aa16.08■□□□□ 0.16
COPS9-204ENST00000491765 MST1RQ04912 1400 aa16.08■□□□□ 0.16
COPS9-204ENST00000491765 NUTM2BA6NNL0 878 aaPredicted RBP16.05■□□□□ 0.16
COPS9-204ENST00000491765 NUTM2EB1AL46 878 aaPredicted RBP16.05■□□□□ 0.16
COPS9-204ENST00000491765 NUTM2AQ8IVF1 878 aaPredicted RBP16.05■□□□□ 0.16
COPS9-204ENST00000491765 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
COPS9-204ENST00000491765 KIAA1210Q9ULL0 1709 aa16.04■□□□□ 0.16
COPS9-204ENST00000491765 DCCP43146 1447 aa16.03■□□□□ 0.16
COPS9-204ENST00000491765 ADGRL3Q9HAR2 1447 aa16.03■□□□□ 0.16
COPS9-204ENST00000491765 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
COPS9-204ENST00000491765 MEX3CQ5U5Q3 659 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms