RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
USP30-207ENST00000491362 ADGRB3O60242 1522 aa13.1□□□□□ -0.31
USP30-207ENST00000491362 TET3O43151 1660 aa13.1□□□□□ -0.31
USP30-207ENST00000491362 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
USP30-207ENST00000491362 UNC13BO14795 1591 aa13.1□□□□□ -0.31
USP30-207ENST00000491362 HSPA1LP34931 641 aa13.09□□□□□ -0.31
USP30-207ENST00000491362 ILDR2Q71H61 639 aa13.08□□□□□ -0.32
USP30-207ENST00000491362 KCNA6P17658 529 aa13.07□□□□□ -0.32
USP30-207ENST00000491362 ZFYVE9O95405 1425 aa13.06□□□□□ -0.32
USP30-207ENST00000491362 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
USP30-207ENST00000491362 SOCS7O14512 581 aa13.06□□□□□ -0.32
USP30-207ENST00000491362 HDGFP51858 240 aaKnown RBP13.06□□□□□ -0.32
USP30-207ENST00000491362 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
USP30-207ENST00000491362 IQGAP3Q86VI3 1631 aa13.05□□□□□ -0.32
USP30-207ENST00000491362 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
USP30-207ENST00000491362 NKTRP30414 1462 aaKnown RBP13.04□□□□□ -0.32
USP30-207ENST00000491362 TMEM131LA2VDJ0 1609 aa13.03□□□□□ -0.32
USP30-207ENST00000491362 FAM135BQ49AJ0 1406 aa13.03□□□□□ -0.32
USP30-207ENST00000491362 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
USP30-207ENST00000491362 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.02□□□□□ -0.33
USP30-207ENST00000491362 TBX22Q9Y458 520 aa13.01□□□□□ -0.33
USP30-207ENST00000491362 NUP155O75694 1391 aa13.01□□□□□ -0.33
USP30-207ENST00000491362 TMEM94Q12767 1356 aa13.01□□□□□ -0.33
USP30-207ENST00000491362 RRBP1Q9P2E9 1410 aaKnown RBP13.01□□□□□ -0.33
USP30-207ENST00000491362 RIMS2Q9UQ26 1411 aa13.01□□□□□ -0.33
USP30-207ENST00000491362 E9PCH4 1651 aa13.01□□□□□ -0.33
USP30-207ENST00000491362 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
USP30-207ENST00000491362 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
USP30-207ENST00000491362 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
USP30-207ENST00000491362 MED1Q15648 1581 aaPredicted RBP12.99□□□□□ -0.33
USP30-207ENST00000491362 PIK3R4Q99570 1358 aa12.99□□□□□ -0.33
USP30-207ENST00000491362 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
USP30-207ENST00000491362 DIP2AQ14689 1571 aa12.97□□□□□ -0.33
USP30-207ENST00000491362 ADAMTS13Q76LX8 1427 aa12.96□□□□□ -0.34
USP30-207ENST00000491362 CHD2O14647 1828 aaKnown RBP12.95□□□□□ -0.34
USP30-207ENST00000491362 PPP1R15AO75807 674 aaPredicted RBP12.95□□□□□ -0.34
USP30-207ENST00000491362 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
USP30-207ENST00000491362 MSH6P52701 1360 aa12.94□□□□□ -0.34
USP30-207ENST00000491362 SLC4A2P04920 1241 aa12.93□□□□□ -0.34
USP30-207ENST00000491362 ITGAEP38570 1179 aa12.93□□□□□ -0.34
USP30-207ENST00000491362 BCANQ96GW7 911 aa12.93□□□□□ -0.34
USP30-207ENST00000491362 NAIPQ13075 1403 aa12.93□□□□□ -0.34
USP30-207ENST00000491362 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
USP30-207ENST00000491362 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
USP30-207ENST00000491362 HFM1A2PYH4 1435 aa12.9□□□□□ -0.34
USP30-207ENST00000491362 TRPM2O94759 1503 aa12.9□□□□□ -0.34
USP30-207ENST00000491362 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
USP30-207ENST00000491362 SPHKAPQ2M3C7 1700 aa12.9□□□□□ -0.34
USP30-207ENST00000491362 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.35
USP30-207ENST00000491362 C19orf44Q9H6X5 657 aa12.89□□□□□ -0.35
USP30-207ENST00000491362 ROBO1Q9Y6N7 1651 aa12.89□□□□□ -0.35
USP30-207ENST00000491362 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
USP30-207ENST00000491362 RBM33Q96EV2 1170 aaKnown RBP12.87□□□□□ -0.35
USP30-207ENST00000491362 DCCP43146 1447 aa12.87□□□□□ -0.35
USP30-207ENST00000491362 AMOTL2Q9Y2J4 779 aa12.86□□□□□ -0.35
USP30-207ENST00000491362 NRXN3Q9Y4C0 1643 aa12.86□□□□□ -0.35
USP30-207ENST00000491362 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
USP30-207ENST00000491362 NUTM2DQ5VT03 806 aaPredicted RBP12.85□□□□□ -0.35
USP30-207ENST00000491362 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
USP30-207ENST00000491362 RGS17Q9UGC6 210 aaPredicted RBP12.84□□□□□ -0.35
USP30-207ENST00000491362 XRN1Q8IZH2 1706 aaKnown RBP12.84□□□□□ -0.35
USP30-207ENST00000491362 RPGRIP1LQ68CZ1 1315 aa12.84□□□□□ -0.35
USP30-207ENST00000491362 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
USP30-207ENST00000491362 JCADQ9P266 1359 aa12.83□□□□□ -0.36
USP30-207ENST00000491362 ATF3P18847 181 aa12.83□□□□□ -0.36
USP30-207ENST00000491362 ACIN1Q9UKV3 1341 aaKnown RBP12.83□□□□□ -0.36
USP30-207ENST00000491362 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
USP30-207ENST00000491362 PRAG1Q86YV5 1406 aa12.82□□□□□ -0.36
USP30-207ENST00000491362 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
USP30-207ENST00000491362 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
USP30-207ENST00000491362 METP08581 1390 aa12.81□□□□□ -0.36
USP30-207ENST00000491362 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
USP30-207ENST00000491362 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
USP30-207ENST00000491362 PHLPP1O60346 1717 aa12.8□□□□□ -0.36
USP30-207ENST00000491362 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
USP30-207ENST00000491362 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
USP30-207ENST00000491362 KIF1BO60333 1816 aa12.79□□□□□ -0.36
USP30-207ENST00000491362 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
USP30-207ENST00000491362 TRIM52Q96A61 297 aa12.78□□□□□ -0.36
USP30-207ENST00000491362 PTCH1Q13635 1447 aa12.78□□□□□ -0.36
USP30-207ENST00000491362 ADGRL3Q9HAR2 1447 aa12.78□□□□□ -0.36
USP30-207ENST00000491362 BRINP3Q76B58 766 aa12.77□□□□□ -0.37
USP30-207ENST00000491362 MST1RQ04912 1400 aa12.77□□□□□ -0.37
USP30-207ENST00000491362 SETD5Q9C0A6 1442 aa12.75□□□□□ -0.37
USP30-207ENST00000491362 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
USP30-207ENST00000491362 SHPRHQ149N8 1683 aa12.74□□□□□ -0.37
USP30-207ENST00000491362 ASXL1Q8IXJ9 1541 aa12.74□□□□□ -0.37
USP30-207ENST00000491362 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
USP30-207ENST00000491362 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
USP30-207ENST00000491362 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
USP30-207ENST00000491362 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
USP30-207ENST00000491362 PPLO60437 1756 aa12.72□□□□□ -0.37
USP30-207ENST00000491362 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
USP30-207ENST00000491362 ANKRD30BQ9BXX2 1392 aa12.71□□□□□ -0.37
USP30-207ENST00000491362 ROBO2Q9HCK4 1378 aa12.71□□□□□ -0.37
USP30-207ENST00000491362 LRP6O75581 1613 aa12.71□□□□□ -0.37
USP30-207ENST00000491362 LAMC1P11047 1609 aa12.71□□□□□ -0.37
USP30-207ENST00000491362 NHSL1Q5SYE7 1610 aa12.71□□□□□ -0.37
USP30-207ENST00000491362 LRRC59Q96AG4 307 aaKnown RBP12.71□□□□□ -0.37
USP30-207ENST00000491362 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms