RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RIMS2Q9UQ26 1411 aa27.3■■□□□ 1.96
HMGN1-219ENST00000491183 XIRP1Q702N8 1843 aaKnown RBP27.28■■□□□ 1.96
HMGN1-219ENST00000491183 SENP3Q9H4L4 574 aaPredicted RBP27.28■■□□□ 1.96
HMGN1-219ENST00000491183 KCNA6P17658 529 aa27.27■■□□□ 1.96
HMGN1-219ENST00000491183 HSPA1LP34931 641 aa27.26■■□□□ 1.95
HMGN1-219ENST00000491183 HDGFP51858 240 aaKnown RBP27.26■■□□□ 1.95
HMGN1-219ENST00000491183 BCANQ96GW7 911 aa27.26■■□□□ 1.95
HMGN1-219ENST00000491183 PLEKHG1Q9ULL1 1385 aa27.25■■□□□ 1.95
HMGN1-219ENST00000491183 DISP3Q9P2K9 1392 aa27.23■■□□□ 1.95
HMGN1-219ENST00000491183 PPP1R15AO75807 674 aaPredicted RBP27.22■■□□□ 1.95
HMGN1-219ENST00000491183 NUTM2DQ5VT03 806 aaPredicted RBP27.22■■□□□ 1.95
HMGN1-219ENST00000491183 SPHKAPQ2M3C7 1700 aa27.21■■□□□ 1.95
HMGN1-219ENST00000491183 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.21■■□□□ 1.95
HMGN1-219ENST00000491183 HFM1A2PYH4 1435 aa27.21■■□□□ 1.95
HMGN1-219ENST00000491183 TMEM94Q12767 1356 aa27.19■■□□□ 1.94
HMGN1-219ENST00000491183 PROSER2Q86WR7 435 aaPredicted RBP27.18■■□□□ 1.94
HMGN1-219ENST00000491183 RBM33Q96EV2 1170 aaKnown RBP27.18■■□□□ 1.94
HMGN1-219ENST00000491183 NWD1Q149M9 1564 aa27.18■■□□□ 1.94
HMGN1-219ENST00000491183 TBX22Q9Y458 520 aa27.17■■□□□ 1.94
HMGN1-219ENST00000491183 CHD2O14647 1828 aaKnown RBP27.16■■□□□ 1.94
HMGN1-219ENST00000491183 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
HMGN1-219ENST00000491183 ADAMTS13Q76LX8 1427 aa27.15■■□□□ 1.94
HMGN1-219ENST00000491183 NKTRP30414 1462 aaKnown RBP27.13■■□□□ 1.93
HMGN1-219ENST00000491183 ILDR2Q71H61 639 aa27.11■■□□□ 1.93
HMGN1-219ENST00000491183 CLTCL1P53675 1640 aa27.11■■□□□ 1.93
HMGN1-219ENST00000491183 TRPM2O94759 1503 aa27.09■■□□□ 1.93
HMGN1-219ENST00000491183 ZNF326Q5BKZ1 582 aaKnown RBP27.06■■□□□ 1.92
HMGN1-219ENST00000491183 SLC4A1APQ9BWU0 796 aaKnown RBP27.06■■□□□ 1.92
HMGN1-219ENST00000491183 DIP2AQ14689 1571 aa27.05■■□□□ 1.92
HMGN1-219ENST00000491183 PIK3R4Q99570 1358 aa27.03■■□□□ 1.92
HMGN1-219ENST00000491183 FAM135BQ49AJ0 1406 aa27.02■■□□□ 1.92
HMGN1-219ENST00000491183 KIF1BO60333 1816 aa27.02■■□□□ 1.92
HMGN1-219ENST00000491183 NRXN3Q9Y4C0 1643 aa27.01■■□□□ 1.92
HMGN1-219ENST00000491183 PTPRUQ92729 1446 aa27■■□□□ 1.91
HMGN1-219ENST00000491183 MSH6P52701 1360 aa27■■□□□ 1.91
HMGN1-219ENST00000491183 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
HMGN1-219ENST00000491183 AMOTL2Q9Y2J4 779 aa26.99■■□□□ 1.91
HMGN1-219ENST00000491183 SETBP1Q9Y6X0 1596 aa26.99■■□□□ 1.91
HMGN1-219ENST00000491183 MED1Q15648 1581 aaPredicted RBP26.97■■□□□ 1.91
HMGN1-219ENST00000491183 FOXD1Q16676 465 aa26.97■■□□□ 1.91
HMGN1-219ENST00000491183 NCOA3Q9Y6Q9 1424 aa26.96■■□□□ 1.91
HMGN1-219ENST00000491183 ROBO1Q9Y6N7 1651 aa26.95■■□□□ 1.9
HMGN1-219ENST00000491183 SLAIN2Q9P270 581 aa26.94■■□□□ 1.9
HMGN1-219ENST00000491183 METP08581 1390 aa26.93■■□□□ 1.9
HMGN1-219ENST00000491183 MPHOSPH9Q99550 1183 aa26.92■■□□□ 1.9
HMGN1-219ENST00000491183 C14orf37Q86TY3 774 aa26.9■■□□□ 1.9
HMGN1-219ENST00000491183 XRN1Q8IZH2 1706 aaKnown RBP26.9■■□□□ 1.9
HMGN1-219ENST00000491183 C19orf44Q9H6X5 657 aa26.89■■□□□ 1.9
HMGN1-219ENST00000491183 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.88■■□□□ 1.89
HMGN1-219ENST00000491183 VGFO15240 615 aaPredicted RBP26.87■■□□□ 1.89
HMGN1-219ENST00000491183 RPGRIP1LQ68CZ1 1315 aa26.87■■□□□ 1.89
HMGN1-219ENST00000491183 SETD5Q9C0A6 1442 aa26.86■■□□□ 1.89
HMGN1-219ENST00000491183 CADPS2Q86UW7 1296 aa26.84■■□□□ 1.89
HMGN1-219ENST00000491183 SOCS7O14512 581 aa26.83■■□□□ 1.89
HMGN1-219ENST00000491183 PPLO60437 1756 aa26.83■■□□□ 1.89
HMGN1-219ENST00000491183 ATF3P18847 181 aa26.82■■□□□ 1.88
HMGN1-219ENST00000491183 CCDC144AA2RUR9 1427 aa26.81■■□□□ 1.88
HMGN1-219ENST00000491183 SETD1AO15047 1707 aaKnown RBP26.8■■□□□ 1.88
HMGN1-219ENST00000491183 ACIN1Q9UKV3 1341 aaKnown RBP26.79■■□□□ 1.88
HMGN1-219ENST00000491183 SPATA31E1Q6ZUB1 1445 aa26.78■■□□□ 1.88
HMGN1-219ENST00000491183 PHLPP1O60346 1717 aa26.78■■□□□ 1.88
HMGN1-219ENST00000491183 RGL3Q3MIN7 710 aa26.77■■□□□ 1.88
HMGN1-219ENST00000491183 PHF23Q9BUL5 403 aaPredicted RBP26.77■■□□□ 1.88
HMGN1-219ENST00000491183 RAB3GAP2Q9H2M9 1393 aa26.76■■□□□ 1.87
HMGN1-219ENST00000491183 DCCP43146 1447 aa26.74■■□□□ 1.87
HMGN1-219ENST00000491183 ADGRF5Q8IZF2 1346 aa26.74■■□□□ 1.87
HMGN1-219ENST00000491183 COL16A1Q07092 1604 aaPredicted RBP26.72■■□□□ 1.87
HMGN1-219ENST00000491183 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
HMGN1-219ENST00000491183 RGS17Q9UGC6 210 aaPredicted RBP26.71■■□□□ 1.87
HMGN1-219ENST00000491183 ROBO2Q9HCK4 1378 aa26.71■■□□□ 1.87
HMGN1-219ENST00000491183 IFT172Q9UG01 1749 aa26.7■■□□□ 1.87
HMGN1-219ENST00000491183 ADGRL3Q9HAR2 1447 aa26.7■■□□□ 1.86
HMGN1-219ENST00000491183 MST1RQ04912 1400 aa26.69■■□□□ 1.86
HMGN1-219ENST00000491183 NALCNQ8IZF0 1738 aa26.69■■□□□ 1.86
HMGN1-219ENST00000491183 PTCH1Q13635 1447 aa26.68■■□□□ 1.86
HMGN1-219ENST00000491183 JCADQ9P266 1359 aa26.68■■□□□ 1.86
HMGN1-219ENST00000491183 AHDC1Q5TGY3 1603 aaPredicted RBP26.68■■□□□ 1.86
HMGN1-219ENST00000491183 PRAG1Q86YV5 1406 aa26.67■■□□□ 1.86
HMGN1-219ENST00000491183 ANKRD30BQ9BXX2 1392 aa26.67■■□□□ 1.86
HMGN1-219ENST00000491183 ASXL1Q8IXJ9 1541 aa26.62■■□□□ 1.85
HMGN1-219ENST00000491183 HRCP23327 699 aa26.6■■□□□ 1.85
HMGN1-219ENST00000491183 PIK3C2GO75747 1445 aa26.59■■□□□ 1.85
HMGN1-219ENST00000491183 TMEM132EQ6IEE7 984 aa26.58■■□□□ 1.85
HMGN1-219ENST00000491183 STK26Q9P289 416 aa26.57■■□□□ 1.84
HMGN1-219ENST00000491183 NHSL1Q5SYE7 1610 aa26.57■■□□□ 1.84
HMGN1-219ENST00000491183 C1orf167Q5SNV9 1468 aa26.56■■□□□ 1.84
HMGN1-219ENST00000491183 DDX17Q92841 729 aaKnown RBP26.56■■□□□ 1.84
HMGN1-219ENST00000491183 SHPRHQ149N8 1683 aa26.55■■□□□ 1.84
HMGN1-219ENST00000491183 SPATA31A6Q5VVP1 1343 aa26.55■■□□□ 1.84
HMGN1-219ENST00000491183 LRPPRCP42704 1394 aaKnown RBP26.55■■□□□ 1.84
HMGN1-219ENST00000491183 POTEAQ6S8J7 498 aa26.54■■□□□ 1.84
HMGN1-219ENST00000491183 LRP6O75581 1613 aa26.54■■□□□ 1.84
HMGN1-219ENST00000491183 WAPLQ7Z5K2 1190 aa26.53■■□□□ 1.84
HMGN1-219ENST00000491183 C14orf93Q9H972 538 aaKnown RBP26.53■■□□□ 1.84
HMGN1-219ENST00000491183 ABCC11Q96J66 1382 aa26.53■■□□□ 1.84
HMGN1-219ENST00000491183 TECPR2O15040 1411 aa26.53■■□□□ 1.84
HMGN1-219ENST00000491183 NRXN1Q9ULB1 1477 aa26.53■■□□□ 1.84
HMGN1-219ENST00000491183 ORAI2Q96SN7 254 aa26.52■■□□□ 1.84
HMGN1-219ENST00000491183 MYOM2P54296 1465 aa26.5■■□□□ 1.83
HMGN1-219ENST00000491183 CFAP70Q5T0N1 1121 aa26.5■■□□□ 1.83
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