RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 PHLPP1O60346 1717 aa24.13■■□□□ 1.45
SCAMP3-208ENST00000490999 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
SCAMP3-208ENST00000490999 ZFYVE9O95405 1425 aa24.08■■□□□ 1.44
SCAMP3-208ENST00000490999 JCADQ9P266 1359 aa24.07■■□□□ 1.44
SCAMP3-208ENST00000490999 LRP6O75581 1613 aa24.06■■□□□ 1.44
SCAMP3-208ENST00000490999 COL16A1Q07092 1604 aaPredicted RBP24.06■■□□□ 1.44
SCAMP3-208ENST00000490999 SLAIN2Q9P270 581 aa24.06■■□□□ 1.44
SCAMP3-208ENST00000490999 GCC2Q8IWJ2 1684 aa24.05■■□□□ 1.44
SCAMP3-208ENST00000490999 PLEKHG1Q9ULL1 1385 aa24.03■■□□□ 1.44
SCAMP3-208ENST00000490999 RIMS2Q9UQ26 1411 aa24.03■■□□□ 1.44
SCAMP3-208ENST00000490999 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
SCAMP3-208ENST00000490999 MYO5BQ9ULV0 1848 aa24.02■■□□□ 1.44
SCAMP3-208ENST00000490999 ADGRL2O95490 1459 aa24.01■■□□□ 1.43
SCAMP3-208ENST00000490999 SLC52A1Q9NWF4 448 aa24.01■■□□□ 1.43
SCAMP3-208ENST00000490999 RPRD2Q5VT52 1461 aaKnown RBP24■■□□□ 1.43
SCAMP3-208ENST00000490999 APLP2Q06481 763 aa23.99■■□□□ 1.43
SCAMP3-208ENST00000490999 TMEM131LA2VDJ0 1609 aa23.99■■□□□ 1.43
SCAMP3-208ENST00000490999 CHD2O14647 1828 aaKnown RBP23.98■■□□□ 1.43
SCAMP3-208ENST00000490999 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
SCAMP3-208ENST00000490999 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
SCAMP3-208ENST00000490999 ANKRD50Q9ULJ7 1429 aa23.96■■□□□ 1.43
SCAMP3-208ENST00000490999 MEX3CQ5U5Q3 659 aaKnown RBP23.95■■□□□ 1.42
SCAMP3-208ENST00000490999 TRIM52Q96A61 297 aa23.94■■□□□ 1.42
SCAMP3-208ENST00000490999 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
SCAMP3-208ENST00000490999 AHDC1Q5TGY3 1603 aaPredicted RBP23.93■■□□□ 1.42
SCAMP3-208ENST00000490999 CHGAP10645 457 aaKnown RBP23.93■■□□□ 1.42
SCAMP3-208ENST00000490999 FAM50AQ14320 339 aaKnown RBP23.92■■□□□ 1.42
SCAMP3-208ENST00000490999 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.91■■□□□ 1.42
SCAMP3-208ENST00000490999 SPATA31A6Q5VVP1 1343 aa23.9■■□□□ 1.42
SCAMP3-208ENST00000490999 SHPRHQ149N8 1683 aa23.89■■□□□ 1.42
SCAMP3-208ENST00000490999 UNC13BO14795 1591 aa23.89■■□□□ 1.41
SCAMP3-208ENST00000490999 DIP2AQ14689 1571 aa23.89■■□□□ 1.41
SCAMP3-208ENST00000490999 TBX22Q9Y458 520 aa23.88■■□□□ 1.41
SCAMP3-208ENST00000490999 NCOA3Q9Y6Q9 1424 aa23.87■■□□□ 1.41
SCAMP3-208ENST00000490999 UPF1Q92900 1129 aaKnown RBP eCLIP23.87■■□□□ 1.41
SCAMP3-208ENST00000490999 E9PCH4 1651 aa23.86■■□□□ 1.41
SCAMP3-208ENST00000490999 ZNF772Q68DY9 489 aaPredicted RBP23.86■■□□□ 1.41
SCAMP3-208ENST00000490999 ATF3P18847 181 aa23.85■■□□□ 1.41
SCAMP3-208ENST00000490999 CADPS2Q86UW7 1296 aa23.85■■□□□ 1.41
SCAMP3-208ENST00000490999 PTPRUQ92729 1446 aa23.84■■□□□ 1.41
SCAMP3-208ENST00000490999 HDGFP51858 240 aaKnown RBP23.84■■□□□ 1.41
SCAMP3-208ENST00000490999 NUTM2BA6NNL0 878 aaPredicted RBP23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 NUTM2EB1AL46 878 aaPredicted RBP23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 BRINP3Q76B58 766 aa23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 NUTM2AQ8IVF1 878 aaPredicted RBP23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 TRPM2O94759 1503 aa23.83■■□□□ 1.41
SCAMP3-208ENST00000490999 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
SCAMP3-208ENST00000490999 PIK3R4Q99570 1358 aa23.8■■□□□ 1.4
SCAMP3-208ENST00000490999 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
SCAMP3-208ENST00000490999 IQGAP3Q86VI3 1631 aa23.78■■□□□ 1.4
SCAMP3-208ENST00000490999 AMOTL2Q9Y2J4 779 aa23.78■■□□□ 1.4
SCAMP3-208ENST00000490999 RXRBP28702 533 aa23.77■■□□□ 1.4
SCAMP3-208ENST00000490999 XRN1Q8IZH2 1706 aaKnown RBP23.76■■□□□ 1.39
SCAMP3-208ENST00000490999 AFF2P51816 1311 aa23.76■■□□□ 1.39
SCAMP3-208ENST00000490999 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
SCAMP3-208ENST00000490999 DCCP43146 1447 aa23.75■■□□□ 1.39
SCAMP3-208ENST00000490999 MST1RQ04912 1400 aa23.75■■□□□ 1.39
SCAMP3-208ENST00000490999 RGS12O14924 1447 aa23.73■■□□□ 1.39
SCAMP3-208ENST00000490999 NHSL1Q5SYE7 1610 aa23.73■■□□□ 1.39
SCAMP3-208ENST00000490999 CDK12Q9NYV4 1490 aaPredicted RBP23.72■■□□□ 1.39
SCAMP3-208ENST00000490999 SETD5Q9C0A6 1442 aa23.71■■□□□ 1.39
SCAMP3-208ENST00000490999 DDX17Q92841 729 aaKnown RBP23.71■■□□□ 1.39
SCAMP3-208ENST00000490999 SETBP1Q9Y6X0 1596 aa23.7■■□□□ 1.38
SCAMP3-208ENST00000490999 NUP155O75694 1391 aa23.69■■□□□ 1.38
SCAMP3-208ENST00000490999 C8orf37Q96NL8 207 aa23.69■■□□□ 1.38
SCAMP3-208ENST00000490999 METP08581 1390 aa23.68■■□□□ 1.38
SCAMP3-208ENST00000490999 ROCK1Q13464 1354 aa23.66■■□□□ 1.38
SCAMP3-208ENST00000490999 ADGRL3Q9HAR2 1447 aa23.66■■□□□ 1.38
SCAMP3-208ENST00000490999 PNPLA6Q8IY17 1366 aa23.65■■□□□ 1.38
SCAMP3-208ENST00000490999 NALCNQ8IZF0 1738 aa23.65■■□□□ 1.38
SCAMP3-208ENST00000490999 ITGAEP38570 1179 aa23.63■■□□□ 1.37
SCAMP3-208ENST00000490999 ZNF326Q5BKZ1 582 aaKnown RBP23.63■■□□□ 1.37
SCAMP3-208ENST00000490999 SPHKAPQ2M3C7 1700 aa23.62■■□□□ 1.37
SCAMP3-208ENST00000490999 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
SCAMP3-208ENST00000490999 ADAMTS2O95450 1211 aa23.59■■□□□ 1.37
SCAMP3-208ENST00000490999 QTRT2Q9H974 415 aaKnown RBP23.59■■□□□ 1.37
SCAMP3-208ENST00000490999 NEXMIFQ5QGS0 1516 aa23.58■■□□□ 1.36
SCAMP3-208ENST00000490999 RBM6P78332 1123 aaKnown RBP23.57■■□□□ 1.36
SCAMP3-208ENST00000490999 CLTCL1P53675 1640 aa23.57■■□□□ 1.36
SCAMP3-208ENST00000490999 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
SCAMP3-208ENST00000490999 NGLY1Q96IV0 654 aa23.52■■□□□ 1.36
SCAMP3-208ENST00000490999 EP400Q96L91 3159 aa23.51■■□□□ 1.35
SCAMP3-208ENST00000490999 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
SCAMP3-208ENST00000490999 PTCH1Q13635 1447 aa23.5■■□□□ 1.35
SCAMP3-208ENST00000490999 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
SCAMP3-208ENST00000490999 LAMC1P11047 1609 aa23.48■■□□□ 1.35
SCAMP3-208ENST00000490999 ATAD2Q6PL18 1390 aa23.48■■□□□ 1.35
SCAMP3-208ENST00000490999 PPARGC1BQ86YN6 1023 aaKnown RBP23.46■■□□□ 1.35
SCAMP3-208ENST00000490999 USP21Q9UK80 565 aa23.46■■□□□ 1.35
SCAMP3-208ENST00000490999 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.34
SCAMP3-208ENST00000490999 ATRNO75882 1429 aa23.42■■□□□ 1.34
SCAMP3-208ENST00000490999 TRPC5Q9UL62 973 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-208ENST00000490999 COL22A1Q8NFW1 1626 aaPredicted RBP23.41■■□□□ 1.34
SCAMP3-208ENST00000490999 MYOM2P54296 1465 aa23.4■■□□□ 1.34
SCAMP3-208ENST00000490999 KIF1BO60333 1816 aa23.38■■□□□ 1.33
SCAMP3-208ENST00000490999 FNBP4Q8N3X1 1017 aaPredicted RBP23.37■■□□□ 1.33
SCAMP3-208ENST00000490999 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
SCAMP3-208ENST00000490999 XPCQ01831 940 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms