RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 HDGFP51858 240 aaKnown RBP31.37■■■□□ 2.61
RGPD6-211ENST00000490990 PLEKHG1Q9ULL1 1385 aa31.37■■■□□ 2.61
RGPD6-211ENST00000490990 CLTCL1P53675 1640 aa31.35■■■□□ 2.61
RGPD6-211ENST00000490990 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.34■■■□□ 2.61
RGPD6-211ENST00000490990 SLC26A8Q96RN1 970 aa31.34■■■□□ 2.61
RGPD6-211ENST00000490990 PPP1R15AO75807 674 aaPredicted RBP31.33■■■□□ 2.61
RGPD6-211ENST00000490990 SLC4A1APQ9BWU0 796 aaKnown RBP31.33■■■□□ 2.61
RGPD6-211ENST00000490990 BCANQ96GW7 911 aa31.29■■■□□ 2.6
RGPD6-211ENST00000490990 KIF1BO60333 1816 aa31.27■■■□□ 2.6
RGPD6-211ENST00000490990 XIRP1Q702N8 1843 aaKnown RBP31.27■■■□□ 2.6
RGPD6-211ENST00000490990 KCNA6P17658 529 aa31.27■■■□□ 2.6
RGPD6-211ENST00000490990 NUTM2DQ5VT03 806 aaPredicted RBP31.27■■■□□ 2.6
RGPD6-211ENST00000490990 NWD1Q149M9 1564 aa31.26■■■□□ 2.6
RGPD6-211ENST00000490990 SETD5Q9C0A6 1442 aa31.26■■■□□ 2.6
RGPD6-211ENST00000490990 ALKQ9UM73 1620 aa31.25■■■□□ 2.59
RGPD6-211ENST00000490990 TOM1O60784 492 aa31.25■■■□□ 2.59
RGPD6-211ENST00000490990 SENP3Q9H4L4 574 aaPredicted RBP31.25■■■□□ 2.59
RGPD6-211ENST00000490990 ADAMTS13Q76LX8 1427 aa31.24■■■□□ 2.59
RGPD6-211ENST00000490990 CHD2O14647 1828 aaKnown RBP31.23■■■□□ 2.59
RGPD6-211ENST00000490990 DIP2AQ14689 1571 aa31.22■■■□□ 2.59
RGPD6-211ENST00000490990 TBX22Q9Y458 520 aa31.21■■■□□ 2.59
RGPD6-211ENST00000490990 ZNF326Q5BKZ1 582 aaKnown RBP31.2■■■□□ 2.59
RGPD6-211ENST00000490990 ACIN1Q9UKV3 1341 aaKnown RBP31.2■■■□□ 2.58
RGPD6-211ENST00000490990 NKTRP30414 1462 aaKnown RBP31.2■■■□□ 2.58
RGPD6-211ENST00000490990 MPHOSPH9Q99550 1183 aa31.19■■■□□ 2.58
RGPD6-211ENST00000490990 NEXMIFQ5QGS0 1516 aa31.19■■■□□ 2.58
RGPD6-211ENST00000490990 FOXD1Q16676 465 aa31.18■■■□□ 2.58
RGPD6-211ENST00000490990 NRXN3Q9Y4C0 1643 aa31.16■■■□□ 2.58
RGPD6-211ENST00000490990 TMEM94Q12767 1356 aa31.16■■■□□ 2.58
RGPD6-211ENST00000490990 SETBP1Q9Y6X0 1596 aa31.15■■■□□ 2.58
RGPD6-211ENST00000490990 PIP4K2BP78356 416 aa31.15■■■□□ 2.58
RGPD6-211ENST00000490990 RAB3GAP2Q9H2M9 1393 aa31.15■■■□□ 2.58
RGPD6-211ENST00000490990 PROSER2Q86WR7 435 aaPredicted RBP31.13■■■□□ 2.57
RGPD6-211ENST00000490990 SCAF1Q9H7N4 1312 aaKnown RBP31.12■■■□□ 2.57
RGPD6-211ENST00000490990 PIK3R4Q99570 1358 aa31.12■■■□□ 2.57
RGPD6-211ENST00000490990 CCDC144AA2RUR9 1427 aa31.07■■■□□ 2.57
RGPD6-211ENST00000490990 RBM33Q96EV2 1170 aaKnown RBP31.07■■■□□ 2.56
RGPD6-211ENST00000490990 PPLO60437 1756 aa31.05■■■□□ 2.56
RGPD6-211ENST00000490990 RPGRIP1LQ68CZ1 1315 aa31.04■■■□□ 2.56
RGPD6-211ENST00000490990 PTPRUQ92729 1446 aa31.04■■■□□ 2.56
RGPD6-211ENST00000490990 HSPA1LP34931 641 aa31.02■■■□□ 2.56
RGPD6-211ENST00000490990 SPATA31E1Q6ZUB1 1445 aa31■■■□□ 2.55
RGPD6-211ENST00000490990 VGFO15240 615 aaPredicted RBP31■■■□□ 2.55
RGPD6-211ENST00000490990 XRN1Q8IZH2 1706 aaKnown RBP31■■■□□ 2.55
RGPD6-211ENST00000490990 NCOA3Q9Y6Q9 1424 aa30.99■■■□□ 2.55
RGPD6-211ENST00000490990 AMOTL2Q9Y2J4 779 aa30.99■■■□□ 2.55
RGPD6-211ENST00000490990 METP08581 1390 aa30.98■■■□□ 2.55
RGPD6-211ENST00000490990 MSH6P52701 1360 aa30.97■■■□□ 2.55
RGPD6-211ENST00000490990 HRCP23327 699 aa30.97■■■□□ 2.55
RGPD6-211ENST00000490990 SETD1AO15047 1707 aaKnown RBP30.95■■■□□ 2.55
RGPD6-211ENST00000490990 IFT172Q9UG01 1749 aa30.94■■■□□ 2.54
RGPD6-211ENST00000490990 FAM135BQ49AJ0 1406 aa30.91■■■□□ 2.54
RGPD6-211ENST00000490990 RGL3Q3MIN7 710 aa30.9■■■□□ 2.54
RGPD6-211ENST00000490990 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.88■■■□□ 2.53
RGPD6-211ENST00000490990 ROBO1Q9Y6N7 1651 aa30.87■■■□□ 2.53
RGPD6-211ENST00000490990 ANKRD30BQ9BXX2 1392 aa30.87■■■□□ 2.53
RGPD6-211ENST00000490990 ADGRF5Q8IZF2 1346 aa30.85■■■□□ 2.53
RGPD6-211ENST00000490990 C14orf37Q86TY3 774 aa30.85■■■□□ 2.53
RGPD6-211ENST00000490990 C19orf44Q9H6X5 657 aa30.85■■■□□ 2.53
RGPD6-211ENST00000490990 SLAIN2Q9P270 581 aa30.83■■■□□ 2.53
RGPD6-211ENST00000490990 DISP3Q9P2K9 1392 aa30.81■■■□□ 2.52
RGPD6-211ENST00000490990 PRAG1Q86YV5 1406 aa30.8■■■□□ 2.52
RGPD6-211ENST00000490990 CADPS2Q86UW7 1296 aa30.79■■■□□ 2.52
RGPD6-211ENST00000490990 PTCH1Q13635 1447 aa30.79■■■□□ 2.52
RGPD6-211ENST00000490990 DCCP43146 1447 aa30.78■■■□□ 2.52
RGPD6-211ENST00000490990 PIK3C2GO75747 1445 aa30.77■■■□□ 2.52
RGPD6-211ENST00000490990 ATF3P18847 181 aa30.76■■■□□ 2.51
RGPD6-211ENST00000490990 NALCNQ8IZF0 1738 aa30.74■■■□□ 2.51
RGPD6-211ENST00000490990 ROBO2Q9HCK4 1378 aa30.74■■■□□ 2.51
RGPD6-211ENST00000490990 ADGRL3Q9HAR2 1447 aa30.73■■■□□ 2.51
RGPD6-211ENST00000490990 MYOM2P54296 1465 aa30.73■■■□□ 2.51
RGPD6-211ENST00000490990 NRXN1Q9ULB1 1477 aa30.73■■■□□ 2.51
RGPD6-211ENST00000490990 MED1Q15648 1581 aaPredicted RBP30.73■■■□□ 2.51
RGPD6-211ENST00000490990 ASXL1Q8IXJ9 1541 aa30.7■■■□□ 2.51
RGPD6-211ENST00000490990 PHLPP1O60346 1717 aa30.68■■■□□ 2.5
RGPD6-211ENST00000490990 MST1RQ04912 1400 aa30.66■■■□□ 2.5
RGPD6-211ENST00000490990 TECPR2O15040 1411 aa30.64■■■□□ 2.5
RGPD6-211ENST00000490990 LAMC1P11047 1609 aa30.64■■■□□ 2.5
RGPD6-211ENST00000490990 LRPPRCP42704 1394 aaKnown RBP30.64■■■□□ 2.5
RGPD6-211ENST00000490990 KNDC1Q76NI1 1749 aa30.64■■■□□ 2.5
RGPD6-211ENST00000490990 C14orf93Q9H972 538 aaKnown RBP30.63■■■□□ 2.49
RGPD6-211ENST00000490990 TMEM132EQ6IEE7 984 aa30.62■■■□□ 2.49
RGPD6-211ENST00000490990 AHDC1Q5TGY3 1603 aaPredicted RBP30.62■■■□□ 2.49
RGPD6-211ENST00000490990 ABCC11Q96J66 1382 aa30.61■■■□□ 2.49
RGPD6-211ENST00000490990 COL16A1Q07092 1604 aaPredicted RBP30.61■■■□□ 2.49
RGPD6-211ENST00000490990 BRINP3Q76B58 766 aa30.6■■■□□ 2.49
RGPD6-211ENST00000490990 YTHDC2Q9H6S0 1430 aaKnown RBP30.58■■■□□ 2.49
RGPD6-211ENST00000490990 CFAP70Q5T0N1 1121 aa30.58■■■□□ 2.49
RGPD6-211ENST00000490990 STK26Q9P289 416 aa30.58■■■□□ 2.49
RGPD6-211ENST00000490990 ILDR2Q71H61 639 aa30.56■■■□□ 2.48
RGPD6-211ENST00000490990 DHX57Q6P158 1386 aaKnown RBP30.54■■■□□ 2.48
RGPD6-211ENST00000490990 DCAF11Q8TEB1 546 aa30.54■■■□□ 2.48
RGPD6-211ENST00000490990 C1orf167Q5SNV9 1468 aa30.53■■■□□ 2.48
RGPD6-211ENST00000490990 STAC3Q96MF2 364 aa30.53■■■□□ 2.48
RGPD6-211ENST00000490990 CDC42BPGQ6DT37 1551 aa30.53■■■□□ 2.48
RGPD6-211ENST00000490990 NHSL1Q5SYE7 1610 aa30.52■■■□□ 2.48
RGPD6-211ENST00000490990 WAPLQ7Z5K2 1190 aa30.52■■■□□ 2.48
RGPD6-211ENST00000490990 JCADQ9P266 1359 aa30.52■■■□□ 2.48
RGPD6-211ENST00000490990 KDM2AQ9Y2K7 1162 aa30.51■■■□□ 2.47
RGPD6-211ENST00000490990 PLEKHH1Q9ULM0 1364 aa30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms