RNA–Protein interactions for RNA: ENST00000490970.5

ARHGEF39-206, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 1,270 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-206ENST00000490970 ZFYVE9O95405 1425 aa24.29■■□□□ 1.48
ARHGEF39-206ENST00000490970 RIMS2Q9UQ26 1411 aa24.29■■□□□ 1.48
ARHGEF39-206ENST00000490970 PPP1R15AO75807 674 aaPredicted RBP24.27■■□□□ 1.48
ARHGEF39-206ENST00000490970 HDGFP51858 240 aaKnown RBP24.27■■□□□ 1.48
ARHGEF39-206ENST00000490970 NUTM2DQ5VT03 806 aaPredicted RBP24.27■■□□□ 1.48
ARHGEF39-206ENST00000490970 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
ARHGEF39-206ENST00000490970 KCNA6P17658 529 aa24.26■■□□□ 1.47
ARHGEF39-206ENST00000490970 HSPA1LP34931 641 aa24.25■■□□□ 1.47
ARHGEF39-206ENST00000490970 PLEKHG1Q9ULL1 1385 aa24.24■■□□□ 1.47
ARHGEF39-206ENST00000490970 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
ARHGEF39-206ENST00000490970 HFM1A2PYH4 1435 aa24.22■■□□□ 1.47
ARHGEF39-206ENST00000490970 DISP3Q9P2K9 1392 aa24.22■■□□□ 1.47
ARHGEF39-206ENST00000490970 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
ARHGEF39-206ENST00000490970 XIRP1Q702N8 1843 aaKnown RBP24.2■■□□□ 1.46
ARHGEF39-206ENST00000490970 PROSER2Q86WR7 435 aaPredicted RBP24.2■■□□□ 1.46
ARHGEF39-206ENST00000490970 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
ARHGEF39-206ENST00000490970 TMEM94Q12767 1356 aa24.19■■□□□ 1.46
ARHGEF39-206ENST00000490970 SPHKAPQ2M3C7 1700 aa24.19■■□□□ 1.46
ARHGEF39-206ENST00000490970 TBX22Q9Y458 520 aa24.17■■□□□ 1.46
ARHGEF39-206ENST00000490970 NWD1Q149M9 1564 aa24.13■■□□□ 1.45
ARHGEF39-206ENST00000490970 ADAMTS13Q76LX8 1427 aa24.13■■□□□ 1.45
ARHGEF39-206ENST00000490970 ZNF326Q5BKZ1 582 aaKnown RBP24.13■■□□□ 1.45
ARHGEF39-206ENST00000490970 SLC4A1APQ9BWU0 796 aaKnown RBP24.12■■□□□ 1.45
ARHGEF39-206ENST00000490970 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
ARHGEF39-206ENST00000490970 NKTRP30414 1462 aaKnown RBP24.11■■□□□ 1.45
ARHGEF39-206ENST00000490970 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
ARHGEF39-206ENST00000490970 TRPM2O94759 1503 aa24.1■■□□□ 1.45
ARHGEF39-206ENST00000490970 ILDR2Q71H61 639 aa24.08■■□□□ 1.45
ARHGEF39-206ENST00000490970 FOXD1Q16676 465 aa24.05■■□□□ 1.44
ARHGEF39-206ENST00000490970 DIP2AQ14689 1571 aa24.04■■□□□ 1.44
ARHGEF39-206ENST00000490970 MSH6P52701 1360 aa24.03■■□□□ 1.44
ARHGEF39-206ENST00000490970 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
ARHGEF39-206ENST00000490970 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
ARHGEF39-206ENST00000490970 KIF1BO60333 1816 aa24.02■■□□□ 1.44
ARHGEF39-206ENST00000490970 FAM135BQ49AJ0 1406 aa24.01■■□□□ 1.43
ARHGEF39-206ENST00000490970 PTPRUQ92729 1446 aa24.01■■□□□ 1.43
ARHGEF39-206ENST00000490970 NEXMIFQ5QGS0 1516 aa24■■□□□ 1.43
ARHGEF39-206ENST00000490970 NRXN3Q9Y4C0 1643 aa24■■□□□ 1.43
ARHGEF39-206ENST00000490970 C14orf37Q86TY3 774 aa23.99■■□□□ 1.43
ARHGEF39-206ENST00000490970 MPHOSPH9Q99550 1183 aa23.99■■□□□ 1.43
ARHGEF39-206ENST00000490970 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
ARHGEF39-206ENST00000490970 SLAIN2Q9P270 581 aa23.97■■□□□ 1.43
ARHGEF39-206ENST00000490970 MED1Q15648 1581 aaPredicted RBP23.96■■□□□ 1.43
ARHGEF39-206ENST00000490970 METP08581 1390 aa23.96■■□□□ 1.43
ARHGEF39-206ENST00000490970 NCOA3Q9Y6Q9 1424 aa23.95■■□□□ 1.42
ARHGEF39-206ENST00000490970 ROBO1Q9Y6N7 1651 aa23.94■■□□□ 1.42
ARHGEF39-206ENST00000490970 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
ARHGEF39-206ENST00000490970 VGFO15240 615 aaPredicted RBP23.93■■□□□ 1.42
ARHGEF39-206ENST00000490970 C19orf44Q9H6X5 657 aa23.92■■□□□ 1.42
ARHGEF39-206ENST00000490970 RPGRIP1LQ68CZ1 1315 aa23.91■■□□□ 1.42
ARHGEF39-206ENST00000490970 XRN1Q8IZH2 1706 aaKnown RBP23.89■■□□□ 1.41
ARHGEF39-206ENST00000490970 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
ARHGEF39-206ENST00000490970 CCDC144AA2RUR9 1427 aa23.88■■□□□ 1.41
ARHGEF39-206ENST00000490970 ATF3P18847 181 aa23.88■■□□□ 1.41
ARHGEF39-206ENST00000490970 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
ARHGEF39-206ENST00000490970 RGL3Q3MIN7 710 aa23.87■■□□□ 1.41
ARHGEF39-206ENST00000490970 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
ARHGEF39-206ENST00000490970 PPLO60437 1756 aa23.84■■□□□ 1.41
ARHGEF39-206ENST00000490970 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
ARHGEF39-206ENST00000490970 ACIN1Q9UKV3 1341 aaKnown RBP23.84■■□□□ 1.41
ARHGEF39-206ENST00000490970 SOCS7O14512 581 aa23.82■■□□□ 1.4
ARHGEF39-206ENST00000490970 SPATA31E1Q6ZUB1 1445 aa23.82■■□□□ 1.4
ARHGEF39-206ENST00000490970 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
ARHGEF39-206ENST00000490970 SETD1AO15047 1707 aaKnown RBP23.8■■□□□ 1.4
ARHGEF39-206ENST00000490970 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
ARHGEF39-206ENST00000490970 ROBO2Q9HCK4 1378 aa23.76■■□□□ 1.39
ARHGEF39-206ENST00000490970 DCCP43146 1447 aa23.76■■□□□ 1.39
ARHGEF39-206ENST00000490970 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
ARHGEF39-206ENST00000490970 ADGRL3Q9HAR2 1447 aa23.75■■□□□ 1.39
ARHGEF39-206ENST00000490970 ANKRD30BQ9BXX2 1392 aa23.74■■□□□ 1.39
ARHGEF39-206ENST00000490970 MST1RQ04912 1400 aa23.74■■□□□ 1.39
ARHGEF39-206ENST00000490970 RGS17Q9UGC6 210 aaPredicted RBP23.72■■□□□ 1.39
ARHGEF39-206ENST00000490970 JCADQ9P266 1359 aa23.72■■□□□ 1.39
ARHGEF39-206ENST00000490970 PTCH1Q13635 1447 aa23.72■■□□□ 1.39
ARHGEF39-206ENST00000490970 COL16A1Q07092 1604 aaPredicted RBP23.72■■□□□ 1.39
ARHGEF39-206ENST00000490970 NALCNQ8IZF0 1738 aa23.72■■□□□ 1.39
ARHGEF39-206ENST00000490970 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
ARHGEF39-206ENST00000490970 STK26Q9P289 416 aa23.7■■□□□ 1.38
ARHGEF39-206ENST00000490970 AHDC1Q5TGY3 1603 aaPredicted RBP23.7■■□□□ 1.38
ARHGEF39-206ENST00000490970 TMEM132EQ6IEE7 984 aa23.69■■□□□ 1.38
ARHGEF39-206ENST00000490970 PRAG1Q86YV5 1406 aa23.67■■□□□ 1.38
ARHGEF39-206ENST00000490970 ASXL1Q8IXJ9 1541 aa23.67■■□□□ 1.38
ARHGEF39-206ENST00000490970 HRCP23327 699 aa23.66■■□□□ 1.38
ARHGEF39-206ENST00000490970 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
ARHGEF39-206ENST00000490970 DDX17Q92841 729 aaKnown RBP23.65■■□□□ 1.38
ARHGEF39-206ENST00000490970 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
ARHGEF39-206ENST00000490970 C1orf167Q5SNV9 1468 aa23.63■■□□□ 1.37
ARHGEF39-206ENST00000490970 LRPPRCP42704 1394 aaKnown RBP23.63■■□□□ 1.37
ARHGEF39-206ENST00000490970 C14orf93Q9H972 538 aaKnown RBP23.62■■□□□ 1.37
ARHGEF39-206ENST00000490970 CFAP70Q5T0N1 1121 aa23.61■■□□□ 1.37
ARHGEF39-206ENST00000490970 ORAI2Q96SN7 254 aa23.61■■□□□ 1.37
ARHGEF39-206ENST00000490970 SPATA31A6Q5VVP1 1343 aa23.6■■□□□ 1.37
ARHGEF39-206ENST00000490970 POTEAQ6S8J7 498 aa23.6■■□□□ 1.37
ARHGEF39-206ENST00000490970 ABCC11Q96J66 1382 aa23.6■■□□□ 1.37
ARHGEF39-206ENST00000490970 NHSL1Q5SYE7 1610 aa23.59■■□□□ 1.37
ARHGEF39-206ENST00000490970 LRP6O75581 1613 aa23.59■■□□□ 1.37
ARHGEF39-206ENST00000490970 TECPR2O15040 1411 aa23.59■■□□□ 1.37
ARHGEF39-206ENST00000490970 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.37
ARHGEF39-206ENST00000490970 PLEKHH1Q9ULM0 1364 aa23.58■■□□□ 1.37
ARHGEF39-206ENST00000490970 YTHDC2Q9H6S0 1430 aaKnown RBP23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms