RNA–Protein interactions for RNA: ENST00000490656.5

TMEM120A-213, Transcript of transmembrane protein 120A, humanhuman

TSL 3

Gene TMEM120A, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM120A-213ENST00000490656 ZFYVE9O95405 1425 aa23.92■■□□□ 1.42
TMEM120A-213ENST00000490656 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
TMEM120A-213ENST00000490656 HDGFP51858 240 aaKnown RBP23.91■■□□□ 1.42
TMEM120A-213ENST00000490656 PPP1R15AO75807 674 aaPredicted RBP23.9■■□□□ 1.42
TMEM120A-213ENST00000490656 RAB3GAP2Q9H2M9 1393 aa23.9■■□□□ 1.42
TMEM120A-213ENST00000490656 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
TMEM120A-213ENST00000490656 BCANQ96GW7 911 aa23.87■■□□□ 1.41
TMEM120A-213ENST00000490656 STRCP1A6NGW2 1772 aa23.86■■□□□ 1.41
TMEM120A-213ENST00000490656 MPHOSPH9Q99550 1183 aa23.86■■□□□ 1.41
TMEM120A-213ENST00000490656 PLEKHG1Q9ULL1 1385 aa23.84■■□□□ 1.41
TMEM120A-213ENST00000490656 FOXD1Q16676 465 aa23.83■■□□□ 1.41
TMEM120A-213ENST00000490656 ZNF326Q5BKZ1 582 aaKnown RBP23.83■■□□□ 1.41
TMEM120A-213ENST00000490656 NUTM2DQ5VT03 806 aaPredicted RBP23.8■■□□□ 1.4
TMEM120A-213ENST00000490656 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
TMEM120A-213ENST00000490656 CCDC144AA2RUR9 1427 aa23.79■■□□□ 1.4
TMEM120A-213ENST00000490656 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
TMEM120A-213ENST00000490656 NEXMIFQ5QGS0 1516 aa23.78■■□□□ 1.4
TMEM120A-213ENST00000490656 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
TMEM120A-213ENST00000490656 LRRC7Q96NW7 1537 aa23.74■■□□□ 1.39
TMEM120A-213ENST00000490656 NWD1Q149M9 1564 aa23.74■■□□□ 1.39
TMEM120A-213ENST00000490656 HRCP23327 699 aa23.74■■□□□ 1.39
TMEM120A-213ENST00000490656 CHD2O14647 1828 aaKnown RBP23.73■■□□□ 1.39
TMEM120A-213ENST00000490656 PPLO60437 1756 aa23.73■■□□□ 1.39
TMEM120A-213ENST00000490656 SETBP1Q9Y6X0 1596 aa23.72■■□□□ 1.39
TMEM120A-213ENST00000490656 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
TMEM120A-213ENST00000490656 KCNA6P17658 529 aa23.71■■□□□ 1.39
TMEM120A-213ENST00000490656 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.39
TMEM120A-213ENST00000490656 NKTRP30414 1462 aaKnown RBP23.7■■□□□ 1.38
TMEM120A-213ENST00000490656 UBAP1LF5GYI3 381 aa23.7■■□□□ 1.38
TMEM120A-213ENST00000490656 TBX22Q9Y458 520 aa23.7■■□□□ 1.38
TMEM120A-213ENST00000490656 XIRP1Q702N8 1843 aaKnown RBP23.7■■□□□ 1.38
TMEM120A-213ENST00000490656 RPGRIP1LQ68CZ1 1315 aa23.67■■□□□ 1.38
TMEM120A-213ENST00000490656 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
TMEM120A-213ENST00000490656 IFT172Q9UG01 1749 aa23.65■■□□□ 1.38
TMEM120A-213ENST00000490656 VGFO15240 615 aaPredicted RBP23.65■■□□□ 1.38
TMEM120A-213ENST00000490656 TOM1O60784 492 aa23.64■■□□□ 1.37
TMEM120A-213ENST00000490656 SPATA31E1Q6ZUB1 1445 aa23.64■■□□□ 1.37
TMEM120A-213ENST00000490656 PROSER2Q86WR7 435 aaPredicted RBP23.62■■□□□ 1.37
TMEM120A-213ENST00000490656 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
TMEM120A-213ENST00000490656 RGL3Q3MIN7 710 aa23.61■■□□□ 1.37
TMEM120A-213ENST00000490656 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
TMEM120A-213ENST00000490656 ANKRD30BQ9BXX2 1392 aa23.58■■□□□ 1.37
TMEM120A-213ENST00000490656 SETD1AO15047 1707 aaKnown RBP23.58■■□□□ 1.37
TMEM120A-213ENST00000490656 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
TMEM120A-213ENST00000490656 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
TMEM120A-213ENST00000490656 ALKQ9UM73 1620 aa23.56■■□□□ 1.36
TMEM120A-213ENST00000490656 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
TMEM120A-213ENST00000490656 AMOTL2Q9Y2J4 779 aa23.55■■□□□ 1.36
TMEM120A-213ENST00000490656 PTPRUQ92729 1446 aa23.55■■□□□ 1.36
TMEM120A-213ENST00000490656 METP08581 1390 aa23.54■■□□□ 1.36
TMEM120A-213ENST00000490656 MSH6P52701 1360 aa23.53■■□□□ 1.36
TMEM120A-213ENST00000490656 TRIM26Q12899 539 aaPredicted RBP23.51■■□□□ 1.35
TMEM120A-213ENST00000490656 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
TMEM120A-213ENST00000490656 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
TMEM120A-213ENST00000490656 ADGRF5Q8IZF2 1346 aa23.5■■□□□ 1.35
TMEM120A-213ENST00000490656 MYOM2P54296 1465 aa23.49■■□□□ 1.35
TMEM120A-213ENST00000490656 PIK3C2GO75747 1445 aa23.48■■□□□ 1.35
TMEM120A-213ENST00000490656 LAMC1P11047 1609 aa23.46■■□□□ 1.35
TMEM120A-213ENST00000490656 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.34
TMEM120A-213ENST00000490656 PTCH1Q13635 1447 aa23.43■■□□□ 1.34
TMEM120A-213ENST00000490656 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
TMEM120A-213ENST00000490656 C19orf44Q9H6X5 657 aa23.41■■□□□ 1.34
TMEM120A-213ENST00000490656 ROBO1Q9Y6N7 1651 aa23.41■■□□□ 1.34
TMEM120A-213ENST00000490656 NALCNQ8IZF0 1738 aa23.4■■□□□ 1.34
TMEM120A-213ENST00000490656 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
TMEM120A-213ENST00000490656 KNDC1Q76NI1 1749 aa23.39■■□□□ 1.34
TMEM120A-213ENST00000490656 ATF3P18847 181 aa23.39■■□□□ 1.33
TMEM120A-213ENST00000490656 HSPA1LP34931 641 aa23.39■■□□□ 1.33
TMEM120A-213ENST00000490656 ASXL1Q8IXJ9 1541 aa23.38■■□□□ 1.33
TMEM120A-213ENST00000490656 CADPS2Q86UW7 1296 aa23.38■■□□□ 1.33
TMEM120A-213ENST00000490656 DCCP43146 1447 aa23.38■■□□□ 1.33
TMEM120A-213ENST00000490656 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
TMEM120A-213ENST00000490656 DCAF11Q8TEB1 546 aa23.37■■□□□ 1.33
TMEM120A-213ENST00000490656 ROBO2Q9HCK4 1378 aa23.37■■□□□ 1.33
TMEM120A-213ENST00000490656 ADGRL3Q9HAR2 1447 aa23.36■■□□□ 1.33
TMEM120A-213ENST00000490656 STAC3Q96MF2 364 aa23.35■■□□□ 1.33
TMEM120A-213ENST00000490656 SLAIN2Q9P270 581 aa23.35■■□□□ 1.33
TMEM120A-213ENST00000490656 KDM2AQ9Y2K7 1162 aa23.35■■□□□ 1.33
TMEM120A-213ENST00000490656 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
TMEM120A-213ENST00000490656 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
TMEM120A-213ENST00000490656 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
TMEM120A-213ENST00000490656 TECPR2O15040 1411 aa23.33■■□□□ 1.32
TMEM120A-213ENST00000490656 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.32
TMEM120A-213ENST00000490656 DHX57Q6P158 1386 aaKnown RBP23.32■■□□□ 1.32
TMEM120A-213ENST00000490656 CFAP70Q5T0N1 1121 aa23.32■■□□□ 1.32
TMEM120A-213ENST00000490656 STK26Q9P289 416 aa23.32■■□□□ 1.32
TMEM120A-213ENST00000490656 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
TMEM120A-213ENST00000490656 PHLPP1O60346 1717 aa23.29■■□□□ 1.32
TMEM120A-213ENST00000490656 MST1RQ04912 1400 aa23.26■■□□□ 1.31
TMEM120A-213ENST00000490656 ADGRB1O14514 1584 aa23.26■■□□□ 1.31
TMEM120A-213ENST00000490656 CDC42BPGQ6DT37 1551 aa23.25■■□□□ 1.31
TMEM120A-213ENST00000490656 KIAA1210Q9ULL0 1709 aa23.24■■□□□ 1.31
TMEM120A-213ENST00000490656 SIN3AQ96ST3 1273 aa23.23■■□□□ 1.31
TMEM120A-213ENST00000490656 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
TMEM120A-213ENST00000490656 WAPLQ7Z5K2 1190 aa23.22■■□□□ 1.31
TMEM120A-213ENST00000490656 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
TMEM120A-213ENST00000490656 PLEKHH1Q9ULM0 1364 aa23.21■■□□□ 1.31
TMEM120A-213ENST00000490656 AHDC1Q5TGY3 1603 aaPredicted RBP23.21■■□□□ 1.31
TMEM120A-213ENST00000490656 SIRT1Q96EB6 747 aa23.2■■□□□ 1.3
TMEM120A-213ENST00000490656 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms