RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.75□□□□□ -0.69
LINC02049-201ENST00000490647 MDM2Q00987 491 aaPredicted RBP10.75□□□□□ -0.69
LINC02049-201ENST00000490647 AK7Q96M32 723 aa10.75□□□□□ -0.69
LINC02049-201ENST00000490647 SOWAHBA6NEL2 793 aa10.74□□□□□ -0.69
LINC02049-201ENST00000490647 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
LINC02049-201ENST00000490647 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.73□□□□□ -0.69
LINC02049-201ENST00000490647 PTPN5P54829 565 aa10.72□□□□□ -0.69
LINC02049-201ENST00000490647 RNF40O75150 1001 aa10.71□□□□□ -0.69
LINC02049-201ENST00000490647 TMUB1Q9BVT8 246 aa10.71□□□□□ -0.69
LINC02049-201ENST00000490647 HPS5Q9UPZ3 1129 aa10.71□□□□□ -0.69
LINC02049-201ENST00000490647 SLC10A3P09131 477 aa10.7□□□□□ -0.7
LINC02049-201ENST00000490647 AMHR2Q16671 573 aa10.7□□□□□ -0.7
LINC02049-201ENST00000490647 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
LINC02049-201ENST00000490647 DAXXQ9UER7 740 aaPredicted RBP10.69□□□□□ -0.7
LINC02049-201ENST00000490647 PDE4DQ08499 809 aa10.68□□□□□ -0.7
LINC02049-201ENST00000490647 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
LINC02049-201ENST00000490647 DDX11L8A8MPP1 907 aa10.66□□□□□ -0.7
LINC02049-201ENST00000490647 TTLL12Q14166 644 aaPredicted RBP10.66□□□□□ -0.7
LINC02049-201ENST00000490647 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
LINC02049-201ENST00000490647 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
LINC02049-201ENST00000490647 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
LINC02049-201ENST00000490647 TSR3Q9UJK0 312 aaKnown RBP10.65□□□□□ -0.7
LINC02049-201ENST00000490647 GIGYF2Q6Y7W6 1299 aaKnown RBP10.64□□□□□ -0.71
LINC02049-201ENST00000490647 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
LINC02049-201ENST00000490647 CLCN1P35523 988 aa10.63□□□□□ -0.71
LINC02049-201ENST00000490647 APLP1P51693 650 aa10.63□□□□□ -0.71
LINC02049-201ENST00000490647 PPP4CP60510 307 aa10.63□□□□□ -0.71
LINC02049-201ENST00000490647 FAM217BQ9NTX9 383 aaPredicted RBP10.63□□□□□ -0.71
LINC02049-201ENST00000490647 MS4A1P11836 297 aa10.62□□□□□ -0.71
LINC02049-201ENST00000490647 RDH13Q8NBN7 331 aa10.61□□□□□ -0.71
LINC02049-201ENST00000490647 CFHP08603 1231 aa10.6□□□□□ -0.71
LINC02049-201ENST00000490647 CD46P15529 392 aa10.6□□□□□ -0.71
LINC02049-201ENST00000490647 SSTR3P32745 418 aaPredicted RBP10.6□□□□□ -0.71
LINC02049-201ENST00000490647 HCSTQ9UBK5 93 aa10.6□□□□□ -0.71
LINC02049-201ENST00000490647 BRPF1P55201 1214 aaPredicted RBP10.57□□□□□ -0.72
LINC02049-201ENST00000490647 KDM4CQ9H3R0 1056 aa10.56□□□□□ -0.72
LINC02049-201ENST00000490647 GCGRP47871 477 aa10.55□□□□□ -0.72
LINC02049-201ENST00000490647 SULF1Q8IWU6 871 aa10.55□□□□□ -0.72
LINC02049-201ENST00000490647 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
LINC02049-201ENST00000490647 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
LINC02049-201ENST00000490647 HLA-CQ95604 372 aa10.53□□□□□ -0.72
LINC02049-201ENST00000490647 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
LINC02049-201ENST00000490647 PUS10Q3MIT2 529 aaKnown RBP10.52□□□□□ -0.73
LINC02049-201ENST00000490647 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
LINC02049-201ENST00000490647 FUT2Q10981 343 aa10.51□□□□□ -0.73
LINC02049-201ENST00000490647 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
LINC02049-201ENST00000490647 COPS2P61201 443 aa10.5□□□□□ -0.73
LINC02049-201ENST00000490647 KMT5BQ4FZB7 885 aa10.5□□□□□ -0.73
LINC02049-201ENST00000490647 BLOC1S3Q6QNY0 202 aa10.5□□□□□ -0.73
LINC02049-201ENST00000490647 TJAP1Q5JTD0 557 aa10.49□□□□□ -0.73
LINC02049-201ENST00000490647 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
LINC02049-201ENST00000490647 ZNF516Q92618 1163 aa10.49□□□□□ -0.73
LINC02049-201ENST00000490647 MTRQ99707 1265 aa10.49□□□□□ -0.73
LINC02049-201ENST00000490647 GUCA2AQ02747 115 aa10.48□□□□□ -0.73
LINC02049-201ENST00000490647 NYAP1Q6ZVC0 841 aa10.48□□□□□ -0.73
LINC02049-201ENST00000490647 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
LINC02049-201ENST00000490647 PCDHB3Q9Y5E6 796 aa10.48□□□□□ -0.73
LINC02049-201ENST00000490647 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
LINC02049-201ENST00000490647 KDM4AO75164 1064 aa10.47□□□□□ -0.73
LINC02049-201ENST00000490647 NECTIN2Q92692 538 aa10.47□□□□□ -0.73
LINC02049-201ENST00000490647 MORN1Q5T089 497 aa10.45□□□□□ -0.74
LINC02049-201ENST00000490647 HOXA2O43364 376 aa10.44□□□□□ -0.74
LINC02049-201ENST00000490647 TLL1O43897 1013 aa10.44□□□□□ -0.74
LINC02049-201ENST00000490647 NDUFV2P19404 249 aa10.44□□□□□ -0.74
LINC02049-201ENST00000490647 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
LINC02049-201ENST00000490647 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
LINC02049-201ENST00000490647 ATP6V1AP38606 617 aa10.43□□□□□ -0.74
LINC02049-201ENST00000490647 NUTM1Q86Y26 1132 aa10.43□□□□□ -0.74
LINC02049-201ENST00000490647 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
LINC02049-201ENST00000490647 PRR14Q9BWN1 585 aa10.43□□□□□ -0.74
LINC02049-201ENST00000490647 SLC27A5Q9Y2P5 690 aa10.43□□□□□ -0.74
LINC02049-201ENST00000490647 ITGBL1O95965 494 aaPredicted RBP10.42□□□□□ -0.74
LINC02049-201ENST00000490647 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
LINC02049-201ENST00000490647 IL21Q9HBE4 155 aa10.41□□□□□ -0.74
LINC02049-201ENST00000490647 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
LINC02049-201ENST00000490647 SCUBE3Q8IX30 993 aa10.4□□□□□ -0.74
LINC02049-201ENST00000490647 PCDHGC3Q9UN70 934 aa10.4□□□□□ -0.74
LINC02049-201ENST00000490647 ZPR1O75312 459 aa10.39□□□□□ -0.75
LINC02049-201ENST00000490647 MYSM1Q5VVJ2 828 aa10.39□□□□□ -0.75
LINC02049-201ENST00000490647 RNF19BQ6ZMZ0 732 aa10.39□□□□□ -0.75
LINC02049-201ENST00000490647 USP46P62068 366 aa10.38□□□□□ -0.75
LINC02049-201ENST00000490647 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
LINC02049-201ENST00000490647 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
LINC02049-201ENST00000490647 KCNC4Q03721 635 aa10.37□□□□□ -0.75
LINC02049-201ENST00000490647 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
LINC02049-201ENST00000490647 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
LINC02049-201ENST00000490647 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
LINC02049-201ENST00000490647 DDRGK1Q96HY6 314 aa10.36□□□□□ -0.75
LINC02049-201ENST00000490647 POLR3EQ9NVU0 708 aa10.36□□□□□ -0.75
LINC02049-201ENST00000490647 NR1I2O75469 434 aa10.35□□□□□ -0.75
LINC02049-201ENST00000490647 FDX1P10109 184 aa10.35□□□□□ -0.75
LINC02049-201ENST00000490647 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
LINC02049-201ENST00000490647 CSPP1Q1MSJ5 1256 aa10.34□□□□□ -0.75
LINC02049-201ENST00000490647 RIC3Q7Z5B4 369 aa10.34□□□□□ -0.75
LINC02049-201ENST00000490647 SPTLC1O15269 473 aa10.33□□□□□ -0.76
LINC02049-201ENST00000490647 BRICD5Q6PL45 260 aa10.33□□□□□ -0.76
LINC02049-201ENST00000490647 PROCA1Q8NCQ7 364 aaPredicted RBP10.33□□□□□ -0.76
LINC02049-201ENST00000490647 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
LINC02049-201ENST00000490647 FAM160A2Q8N612 972 aaPredicted RBP10.32□□□□□ -0.76
LINC02049-201ENST00000490647 CABLES1Q8TDN4 633 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms