RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 TMEM94Q12767 1356 aa24.18■■□□□ 1.46
COL2A1-207ENST00000490609 NWD1Q149M9 1564 aa24.18■■□□□ 1.46
COL2A1-207ENST00000490609 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
COL2A1-207ENST00000490609 E9PCH4 1651 aa24.18■■□□□ 1.46
COL2A1-207ENST00000490609 RGS17Q9UGC6 210 aaPredicted RBP24.15■■□□□ 1.46
COL2A1-207ENST00000490609 FAM135BQ49AJ0 1406 aa24.15■■□□□ 1.46
COL2A1-207ENST00000490609 ROBO1Q9Y6N7 1651 aa24.12■■□□□ 1.45
COL2A1-207ENST00000490609 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
COL2A1-207ENST00000490609 PROSER2Q86WR7 435 aaPredicted RBP24.1■■□□□ 1.45
COL2A1-207ENST00000490609 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
COL2A1-207ENST00000490609 NKTRP30414 1462 aaKnown RBP24.09■■□□□ 1.45
COL2A1-207ENST00000490609 ROCK1Q13464 1354 aa24.09■■□□□ 1.45
COL2A1-207ENST00000490609 PLEKHG1Q9ULL1 1385 aa24.09■■□□□ 1.45
COL2A1-207ENST00000490609 ADAMTS13Q76LX8 1427 aa24.04■■□□□ 1.44
COL2A1-207ENST00000490609 PHF23Q9BUL5 403 aaPredicted RBP24.04■■□□□ 1.44
COL2A1-207ENST00000490609 TBX22Q9Y458 520 aa24.02■■□□□ 1.44
COL2A1-207ENST00000490609 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
COL2A1-207ENST00000490609 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
COL2A1-207ENST00000490609 BCANQ96GW7 911 aa23.99■■□□□ 1.43
COL2A1-207ENST00000490609 SLAIN2Q9P270 581 aa23.98■■□□□ 1.43
COL2A1-207ENST00000490609 NUP155O75694 1391 aa23.97■■□□□ 1.43
COL2A1-207ENST00000490609 PHLPP1O60346 1717 aa23.96■■□□□ 1.43
COL2A1-207ENST00000490609 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.96■■□□□ 1.43
COL2A1-207ENST00000490609 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.43
COL2A1-207ENST00000490609 MSH6P52701 1360 aa23.95■■□□□ 1.42
COL2A1-207ENST00000490609 CHGAP10645 457 aaKnown RBP23.95■■□□□ 1.42
COL2A1-207ENST00000490609 PTPRUQ92729 1446 aa23.94■■□□□ 1.42
COL2A1-207ENST00000490609 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
COL2A1-207ENST00000490609 ITGAEP38570 1179 aa23.94■■□□□ 1.42
COL2A1-207ENST00000490609 HDGFP51858 240 aaKnown RBP23.94■■□□□ 1.42
COL2A1-207ENST00000490609 POTEAQ6S8J7 498 aa23.94■■□□□ 1.42
COL2A1-207ENST00000490609 SPHKAPQ2M3C7 1700 aa23.93■■□□□ 1.42
COL2A1-207ENST00000490609 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.93■■□□□ 1.42
COL2A1-207ENST00000490609 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
COL2A1-207ENST00000490609 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
COL2A1-207ENST00000490609 NCOA3Q9Y6Q9 1424 aa23.92■■□□□ 1.42
COL2A1-207ENST00000490609 PIK3R4Q99570 1358 aa23.89■■□□□ 1.41
COL2A1-207ENST00000490609 XRN1Q8IZH2 1706 aaKnown RBP23.86■■□□□ 1.41
COL2A1-207ENST00000490609 TRPM2O94759 1503 aa23.85■■□□□ 1.41
COL2A1-207ENST00000490609 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
COL2A1-207ENST00000490609 AMOTL2Q9Y2J4 779 aa23.84■■□□□ 1.41
COL2A1-207ENST00000490609 CLTCL1P53675 1640 aa23.84■■□□□ 1.41
COL2A1-207ENST00000490609 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
COL2A1-207ENST00000490609 JCADQ9P266 1359 aa23.82■■□□□ 1.4
COL2A1-207ENST00000490609 LRP6O75581 1613 aa23.81■■□□□ 1.4
COL2A1-207ENST00000490609 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
COL2A1-207ENST00000490609 RRBP1Q9P2E9 1410 aaKnown RBP23.81■■□□□ 1.4
COL2A1-207ENST00000490609 METP08581 1390 aa23.8■■□□□ 1.4
COL2A1-207ENST00000490609 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
COL2A1-207ENST00000490609 NAIPQ13075 1403 aa23.79■■□□□ 1.4
COL2A1-207ENST00000490609 CADPS2Q86UW7 1296 aa23.78■■□□□ 1.4
COL2A1-207ENST00000490609 SHPRHQ149N8 1683 aa23.77■■□□□ 1.4
COL2A1-207ENST00000490609 SETD1AO15047 1707 aaKnown RBP23.77■■□□□ 1.4
COL2A1-207ENST00000490609 KIF1BO60333 1816 aa23.77■■□□□ 1.4
COL2A1-207ENST00000490609 BRINP3Q76B58 766 aa23.75■■□□□ 1.39
COL2A1-207ENST00000490609 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
COL2A1-207ENST00000490609 ATF3P18847 181 aa23.74■■□□□ 1.39
COL2A1-207ENST00000490609 MST1RQ04912 1400 aa23.72■■□□□ 1.39
COL2A1-207ENST00000490609 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
COL2A1-207ENST00000490609 NHSL1Q5SYE7 1610 aa23.71■■□□□ 1.39
COL2A1-207ENST00000490609 DCCP43146 1447 aa23.71■■□□□ 1.39
COL2A1-207ENST00000490609 ZNF326Q5BKZ1 582 aaKnown RBP23.71■■□□□ 1.39
COL2A1-207ENST00000490609 SPATA31A6Q5VVP1 1343 aa23.69■■□□□ 1.38
COL2A1-207ENST00000490609 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
COL2A1-207ENST00000490609 PPLO60437 1756 aa23.64■■□□□ 1.37
COL2A1-207ENST00000490609 HFM1A2PYH4 1435 aa23.64■■□□□ 1.37
COL2A1-207ENST00000490609 ADGRL3Q9HAR2 1447 aa23.64■■□□□ 1.37
COL2A1-207ENST00000490609 DDX17Q92841 729 aaKnown RBP23.63■■□□□ 1.37
COL2A1-207ENST00000490609 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
COL2A1-207ENST00000490609 ROBO2Q9HCK4 1378 aa23.59■■□□□ 1.37
COL2A1-207ENST00000490609 LAMC1P11047 1609 aa23.59■■□□□ 1.37
COL2A1-207ENST00000490609 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
COL2A1-207ENST00000490609 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
COL2A1-207ENST00000490609 NUTM2BA6NNL0 878 aaPredicted RBP23.55■■□□□ 1.36
COL2A1-207ENST00000490609 NUTM2EB1AL46 878 aaPredicted RBP23.55■■□□□ 1.36
COL2A1-207ENST00000490609 ZNF772Q68DY9 489 aaPredicted RBP23.55■■□□□ 1.36
COL2A1-207ENST00000490609 NUTM2AQ8IVF1 878 aaPredicted RBP23.55■■□□□ 1.36
COL2A1-207ENST00000490609 TRIM52Q96A61 297 aa23.55■■□□□ 1.36
COL2A1-207ENST00000490609 PTCH1Q13635 1447 aa23.55■■□□□ 1.36
COL2A1-207ENST00000490609 VGFO15240 615 aaPredicted RBP23.54■■□□□ 1.36
COL2A1-207ENST00000490609 FOXD1Q16676 465 aa23.54■■□□□ 1.36
COL2A1-207ENST00000490609 MEX3CQ5U5Q3 659 aaKnown RBP23.54■■□□□ 1.36
COL2A1-207ENST00000490609 SLC4A1APQ9BWU0 796 aaKnown RBP23.53■■□□□ 1.36
COL2A1-207ENST00000490609 RPGRIP1LQ68CZ1 1315 aa23.53■■□□□ 1.36
COL2A1-207ENST00000490609 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
COL2A1-207ENST00000490609 LRRC59Q96AG4 307 aaKnown RBP23.52■■□□□ 1.36
COL2A1-207ENST00000490609 IFT172Q9UG01 1749 aa23.5■■□□□ 1.35
COL2A1-207ENST00000490609 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
COL2A1-207ENST00000490609 UPF1Q92900 1129 aaKnown RBP eCLIP23.49■■□□□ 1.35
COL2A1-207ENST00000490609 AFF2P51816 1311 aa23.49■■□□□ 1.35
COL2A1-207ENST00000490609 SPATA31E1Q6ZUB1 1445 aa23.47■■□□□ 1.35
COL2A1-207ENST00000490609 RXRBP28702 533 aa23.46■■□□□ 1.35
COL2A1-207ENST00000490609 SOS2Q07890 1332 aaPredicted RBP23.46■■□□□ 1.35
COL2A1-207ENST00000490609 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
COL2A1-207ENST00000490609 CDK12Q9NYV4 1490 aaPredicted RBP23.44■■□□□ 1.34
COL2A1-207ENST00000490609 C8orf37Q96NL8 207 aa23.41■■□□□ 1.34
COL2A1-207ENST00000490609 COL22A1Q8NFW1 1626 aaPredicted RBP23.41■■□□□ 1.34
COL2A1-207ENST00000490609 EP400Q96L91 3159 aa23.39■■□□□ 1.34
COL2A1-207ENST00000490609 MPHOSPH9Q99550 1183 aa23.39■■□□□ 1.33
COL2A1-207ENST00000490609 QTRT2Q9H974 415 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms