RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 RIMS2Q9UQ26 1411 aa23.15■■□□□ 1.3
PCCB-218ENST00000490504 TOM1O60784 492 aa23.14■■□□□ 1.29
PCCB-218ENST00000490504 BCANQ96GW7 911 aa23.14■■□□□ 1.29
PCCB-218ENST00000490504 STRCP1A6NGW2 1772 aa23.14■■□□□ 1.29
PCCB-218ENST00000490504 TMEM131LA2VDJ0 1609 aa23.12■■□□□ 1.29
PCCB-218ENST00000490504 HDGFP51858 240 aaKnown RBP23.12■■□□□ 1.29
PCCB-218ENST00000490504 PIP4K2BP78356 416 aa23.12■■□□□ 1.29
PCCB-218ENST00000490504 PPP1R15AO75807 674 aaPredicted RBP23.11■■□□□ 1.29
PCCB-218ENST00000490504 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
PCCB-218ENST00000490504 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
PCCB-218ENST00000490504 SCAF1Q9H7N4 1312 aaKnown RBP23.1■■□□□ 1.29
PCCB-218ENST00000490504 PLEKHG1Q9ULL1 1385 aa23.09■■□□□ 1.29
PCCB-218ENST00000490504 KCNA6P17658 529 aa23.09■■□□□ 1.29
PCCB-218ENST00000490504 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.09■■□□□ 1.29
PCCB-218ENST00000490504 MYO5BQ9ULV0 1848 aa23.04■■□□□ 1.28
PCCB-218ENST00000490504 ALKQ9UM73 1620 aa23.04■■□□□ 1.28
PCCB-218ENST00000490504 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
PCCB-218ENST00000490504 HSPA1LP34931 641 aa23.02■■□□□ 1.28
PCCB-218ENST00000490504 PROSER2Q86WR7 435 aaPredicted RBP23.02■■□□□ 1.28
PCCB-218ENST00000490504 RBM33Q96EV2 1170 aaKnown RBP23.02■■□□□ 1.28
PCCB-218ENST00000490504 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
PCCB-218ENST00000490504 TMEM94Q12767 1356 aa23.02■■□□□ 1.28
PCCB-218ENST00000490504 SETD5Q9C0A6 1442 aa23.02■■□□□ 1.28
PCCB-218ENST00000490504 ZNF326Q5BKZ1 582 aaKnown RBP23■■□□□ 1.27
PCCB-218ENST00000490504 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
PCCB-218ENST00000490504 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
PCCB-218ENST00000490504 RAB3GAP2Q9H2M9 1393 aa22.98■■□□□ 1.27
PCCB-218ENST00000490504 TRPM2O94759 1503 aa22.97■■□□□ 1.27
PCCB-218ENST00000490504 FOXD1Q16676 465 aa22.97■■□□□ 1.27
PCCB-218ENST00000490504 DHX57Q6P158 1386 aaKnown RBP22.95■■□□□ 1.26
PCCB-218ENST00000490504 CLTCL1P53675 1640 aa22.94■■□□□ 1.26
PCCB-218ENST00000490504 NWD1Q149M9 1564 aa22.94■■□□□ 1.26
PCCB-218ENST00000490504 DISP3Q9P2K9 1392 aa22.94■■□□□ 1.26
PCCB-218ENST00000490504 NKTRP30414 1462 aaKnown RBP22.94■■□□□ 1.26
PCCB-218ENST00000490504 XIRP1Q702N8 1843 aaKnown RBP22.92■■□□□ 1.26
PCCB-218ENST00000490504 MPHOSPH9Q99550 1183 aa22.91■■□□□ 1.26
PCCB-218ENST00000490504 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
PCCB-218ENST00000490504 PIK3R4Q99570 1358 aa22.89■■□□□ 1.25
PCCB-218ENST00000490504 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
PCCB-218ENST00000490504 DIP2AQ14689 1571 aa22.87■■□□□ 1.25
PCCB-218ENST00000490504 PTPRUQ92729 1446 aa22.87■■□□□ 1.25
PCCB-218ENST00000490504 NEXMIFQ5QGS0 1516 aa22.86■■□□□ 1.25
PCCB-218ENST00000490504 CHD2O14647 1828 aaKnown RBP22.86■■□□□ 1.25
PCCB-218ENST00000490504 MSH6P52701 1360 aa22.85■■□□□ 1.25
PCCB-218ENST00000490504 METP08581 1390 aa22.84■■□□□ 1.25
PCCB-218ENST00000490504 FAM135BQ49AJ0 1406 aa22.84■■□□□ 1.25
PCCB-218ENST00000490504 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
PCCB-218ENST00000490504 NRXN3Q9Y4C0 1643 aa22.83■■□□□ 1.24
PCCB-218ENST00000490504 VGFO15240 615 aaPredicted RBP22.82■■□□□ 1.24
PCCB-218ENST00000490504 C14orf37Q86TY3 774 aa22.82■■□□□ 1.24
PCCB-218ENST00000490504 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
PCCB-218ENST00000490504 ILDR2Q71H61 639 aa22.81■■□□□ 1.24
PCCB-218ENST00000490504 SLAIN2Q9P270 581 aa22.81■■□□□ 1.24
PCCB-218ENST00000490504 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
PCCB-218ENST00000490504 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
PCCB-218ENST00000490504 CCDC144AA2RUR9 1427 aa22.79■■□□□ 1.24
PCCB-218ENST00000490504 KIF1BO60333 1816 aa22.79■■□□□ 1.24
PCCB-218ENST00000490504 C19orf44Q9H6X5 657 aa22.78■■□□□ 1.24
PCCB-218ENST00000490504 RGL3Q3MIN7 710 aa22.77■■□□□ 1.24
PCCB-218ENST00000490504 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
PCCB-218ENST00000490504 ATF3P18847 181 aa22.72■■□□□ 1.23
PCCB-218ENST00000490504 CADPS2Q86UW7 1296 aa22.72■■□□□ 1.23
PCCB-218ENST00000490504 ADGRF5Q8IZF2 1346 aa22.71■■□□□ 1.23
PCCB-218ENST00000490504 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
PCCB-218ENST00000490504 ROBO1Q9Y6N7 1651 aa22.71■■□□□ 1.23
PCCB-218ENST00000490504 MED1Q15648 1581 aaPredicted RBP22.7■■□□□ 1.22
PCCB-218ENST00000490504 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
PCCB-218ENST00000490504 ANKRD30BQ9BXX2 1392 aa22.66■■□□□ 1.22
PCCB-218ENST00000490504 PPLO60437 1756 aa22.65■■□□□ 1.22
PCCB-218ENST00000490504 ROBO2Q9HCK4 1378 aa22.64■■□□□ 1.22
PCCB-218ENST00000490504 DCCP43146 1447 aa22.63■■□□□ 1.21
PCCB-218ENST00000490504 ADGRL3Q9HAR2 1447 aa22.62■■□□□ 1.21
PCCB-218ENST00000490504 SETD1AO15047 1707 aaKnown RBP22.62■■□□□ 1.21
PCCB-218ENST00000490504 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
PCCB-218ENST00000490504 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
PCCB-218ENST00000490504 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
PCCB-218ENST00000490504 MST1RQ04912 1400 aa22.59■■□□□ 1.21
PCCB-218ENST00000490504 TMEM132EQ6IEE7 984 aa22.58■■□□□ 1.21
PCCB-218ENST00000490504 PRAG1Q86YV5 1406 aa22.58■■□□□ 1.2
PCCB-218ENST00000490504 STK26Q9P289 416 aa22.57■■□□□ 1.2
PCCB-218ENST00000490504 PIK3C2GO75747 1445 aa22.57■■□□□ 1.2
PCCB-218ENST00000490504 SOCS7O14512 581 aa22.55■■□□□ 1.2
PCCB-218ENST00000490504 JCADQ9P266 1359 aa22.55■■□□□ 1.2
PCCB-218ENST00000490504 PHLPP1O60346 1717 aa22.54■■□□□ 1.2
PCCB-218ENST00000490504 C14orf93Q9H972 538 aaKnown RBP22.53■■□□□ 1.2
PCCB-218ENST00000490504 RGS17Q9UGC6 210 aaPredicted RBP22.53■■□□□ 1.2
PCCB-218ENST00000490504 LRPPRCP42704 1394 aaKnown RBP22.53■■□□□ 1.2
PCCB-218ENST00000490504 IFT172Q9UG01 1749 aa22.53■■□□□ 1.2
PCCB-218ENST00000490504 WAPLQ7Z5K2 1190 aa22.53■■□□□ 1.2
PCCB-218ENST00000490504 COL16A1Q07092 1604 aaPredicted RBP22.52■■□□□ 1.2
PCCB-218ENST00000490504 NALCNQ8IZF0 1738 aa22.52■■□□□ 1.2
PCCB-218ENST00000490504 CFAP70Q5T0N1 1121 aa22.52■■□□□ 1.2
PCCB-218ENST00000490504 ASXL1Q8IXJ9 1541 aa22.51■■□□□ 1.19
PCCB-218ENST00000490504 AHDC1Q5TGY3 1603 aaPredicted RBP22.51■■□□□ 1.19
PCCB-218ENST00000490504 ABCC11Q96J66 1382 aa22.51■■□□□ 1.19
PCCB-218ENST00000490504 NRXN1Q9ULB1 1477 aa22.51■■□□□ 1.19
PCCB-218ENST00000490504 DDX17Q92841 729 aaKnown RBP22.5■■□□□ 1.19
PCCB-218ENST00000490504 TECPR2O15040 1411 aa22.5■■□□□ 1.19
PCCB-218ENST00000490504 MYOM2P54296 1465 aa22.5■■□□□ 1.19
PCCB-218ENST00000490504 C1orf167Q5SNV9 1468 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms