RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 HSPA1LP34931 641 aa25.07■■□□□ 1.6
LRCH4-208ENST00000490359 SLC4A1APQ9BWU0 796 aaKnown RBP25.07■■□□□ 1.6
LRCH4-208ENST00000490359 SPHKAPQ2M3C7 1700 aa25.05■■□□□ 1.6
LRCH4-208ENST00000490359 RIMS2Q9UQ26 1411 aa25.04■■□□□ 1.6
LRCH4-208ENST00000490359 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.04■■□□□ 1.6
LRCH4-208ENST00000490359 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
LRCH4-208ENST00000490359 MYO5BQ9ULV0 1848 aa25.03■■□□□ 1.6
LRCH4-208ENST00000490359 SOCS7O14512 581 aa25.03■■□□□ 1.6
LRCH4-208ENST00000490359 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
LRCH4-208ENST00000490359 SETD5Q9C0A6 1442 aa25.03■■□□□ 1.6
LRCH4-208ENST00000490359 PROSER2Q86WR7 435 aaPredicted RBP25.01■■□□□ 1.59
LRCH4-208ENST00000490359 KCNA6P17658 529 aa25■■□□□ 1.59
LRCH4-208ENST00000490359 TRPM2O94759 1503 aa25■■□□□ 1.59
LRCH4-208ENST00000490359 SLC26A8Q96RN1 970 aa24.99■■□□□ 1.59
LRCH4-208ENST00000490359 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
LRCH4-208ENST00000490359 PLEKHG1Q9ULL1 1385 aa24.96■■□□□ 1.59
LRCH4-208ENST00000490359 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
LRCH4-208ENST00000490359 ACIN1Q9UKV3 1341 aaKnown RBP24.95■■□□□ 1.58
LRCH4-208ENST00000490359 CLTCL1P53675 1640 aa24.95■■□□□ 1.58
LRCH4-208ENST00000490359 MPHOSPH9Q99550 1183 aa24.95■■□□□ 1.58
LRCH4-208ENST00000490359 LRRC7Q96NW7 1537 aa24.95■■□□□ 1.58
LRCH4-208ENST00000490359 FOXD1Q16676 465 aa24.94■■□□□ 1.58
LRCH4-208ENST00000490359 ZNF326Q5BKZ1 582 aaKnown RBP24.94■■□□□ 1.58
LRCH4-208ENST00000490359 ILDR2Q71H61 639 aa24.94■■□□□ 1.58
LRCH4-208ENST00000490359 RAB3GAP2Q9H2M9 1393 aa24.93■■□□□ 1.58
LRCH4-208ENST00000490359 C14orf37Q86TY3 774 aa24.92■■□□□ 1.58
LRCH4-208ENST00000490359 STRCP1A6NGW2 1772 aa24.92■■□□□ 1.58
LRCH4-208ENST00000490359 MSH6P52701 1360 aa24.86■■□□□ 1.57
LRCH4-208ENST00000490359 TMEM94Q12767 1356 aa24.86■■□□□ 1.57
LRCH4-208ENST00000490359 KIF1BO60333 1816 aa24.85■■□□□ 1.57
LRCH4-208ENST00000490359 TBX22Q9Y458 520 aa24.85■■□□□ 1.57
LRCH4-208ENST00000490359 CCDC144AA2RUR9 1427 aa24.83■■□□□ 1.57
LRCH4-208ENST00000490359 ADAMTS13Q76LX8 1427 aa24.83■■□□□ 1.57
LRCH4-208ENST00000490359 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
LRCH4-208ENST00000490359 DIP2AQ14689 1571 aa24.8■■□□□ 1.56
LRCH4-208ENST00000490359 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
LRCH4-208ENST00000490359 ATF3P18847 181 aa24.78■■□□□ 1.56
LRCH4-208ENST00000490359 HRCP23327 699 aa24.78■■□□□ 1.56
LRCH4-208ENST00000490359 SLAIN2Q9P270 581 aa24.78■■□□□ 1.56
LRCH4-208ENST00000490359 NKTRP30414 1462 aaKnown RBP24.77■■□□□ 1.56
LRCH4-208ENST00000490359 FAM135BQ49AJ0 1406 aa24.77■■□□□ 1.56
LRCH4-208ENST00000490359 RPGRIP1LQ68CZ1 1315 aa24.76■■□□□ 1.55
LRCH4-208ENST00000490359 SETBP1Q9Y6X0 1596 aa24.76■■□□□ 1.55
LRCH4-208ENST00000490359 RBM33Q96EV2 1170 aaKnown RBP24.75■■□□□ 1.55
LRCH4-208ENST00000490359 PIK3R4Q99570 1358 aa24.75■■□□□ 1.55
LRCH4-208ENST00000490359 VGFO15240 615 aaPredicted RBP24.74■■□□□ 1.55
LRCH4-208ENST00000490359 CHD2O14647 1828 aaKnown RBP24.73■■□□□ 1.55
LRCH4-208ENST00000490359 NRXN3Q9Y4C0 1643 aa24.73■■□□□ 1.55
LRCH4-208ENST00000490359 CADPS2Q86UW7 1296 aa24.73■■□□□ 1.55
LRCH4-208ENST00000490359 RGL3Q3MIN7 710 aa24.72■■□□□ 1.55
LRCH4-208ENST00000490359 XIRP1Q702N8 1843 aaKnown RBP24.71■■□□□ 1.55
LRCH4-208ENST00000490359 C19orf44Q9H6X5 657 aa24.71■■□□□ 1.55
LRCH4-208ENST00000490359 SPATA31E1Q6ZUB1 1445 aa24.7■■□□□ 1.55
LRCH4-208ENST00000490359 ALKQ9UM73 1620 aa24.7■■□□□ 1.54
LRCH4-208ENST00000490359 NCOA3Q9Y6Q9 1424 aa24.69■■□□□ 1.54
LRCH4-208ENST00000490359 MED1Q15648 1581 aaPredicted RBP24.68■■□□□ 1.54
LRCH4-208ENST00000490359 AMOTL2Q9Y2J4 779 aa24.68■■□□□ 1.54
LRCH4-208ENST00000490359 PTPRUQ92729 1446 aa24.68■■□□□ 1.54
LRCH4-208ENST00000490359 METP08581 1390 aa24.67■■□□□ 1.54
LRCH4-208ENST00000490359 PPLO60437 1756 aa24.66■■□□□ 1.54
LRCH4-208ENST00000490359 ANKRD30BQ9BXX2 1392 aa24.65■■□□□ 1.54
LRCH4-208ENST00000490359 ADGRF5Q8IZF2 1346 aa24.62■■□□□ 1.53
LRCH4-208ENST00000490359 MEX3CQ5U5Q3 659 aaKnown RBP24.6■■□□□ 1.53
LRCH4-208ENST00000490359 XRN1Q8IZH2 1706 aaKnown RBP24.6■■□□□ 1.53
LRCH4-208ENST00000490359 IFT172Q9UG01 1749 aa24.57■■□□□ 1.52
LRCH4-208ENST00000490359 JCADQ9P266 1359 aa24.56■■□□□ 1.52
LRCH4-208ENST00000490359 SETD1AO15047 1707 aaKnown RBP24.55■■□□□ 1.52
LRCH4-208ENST00000490359 PIK3C2GO75747 1445 aa24.52■■□□□ 1.52
LRCH4-208ENST00000490359 SPATA31A6Q5VVP1 1343 aa24.5■■□□□ 1.51
LRCH4-208ENST00000490359 MYOM2P54296 1465 aa24.5■■□□□ 1.51
LRCH4-208ENST00000490359 PTCH1Q13635 1447 aa24.49■■□□□ 1.51
LRCH4-208ENST00000490359 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.48■■□□□ 1.51
LRCH4-208ENST00000490359 ROBO1Q9Y6N7 1651 aa24.48■■□□□ 1.51
LRCH4-208ENST00000490359 ROBO2Q9HCK4 1378 aa24.47■■□□□ 1.51
LRCH4-208ENST00000490359 TRIM26Q12899 539 aaPredicted RBP24.47■■□□□ 1.51
LRCH4-208ENST00000490359 NRXN1Q9ULB1 1477 aa24.46■■□□□ 1.51
LRCH4-208ENST00000490359 PRAG1Q86YV5 1406 aa24.46■■□□□ 1.51
LRCH4-208ENST00000490359 ZNF772Q68DY9 489 aaPredicted RBP24.45■■□□□ 1.5
LRCH4-208ENST00000490359 TMEM132EQ6IEE7 984 aa24.45■■□□□ 1.5
LRCH4-208ENST00000490359 STK26Q9P289 416 aa24.45■■□□□ 1.5
LRCH4-208ENST00000490359 KDM2AQ9Y2K7 1162 aa24.45■■□□□ 1.5
LRCH4-208ENST00000490359 DCCP43146 1447 aa24.44■■□□□ 1.5
LRCH4-208ENST00000490359 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
LRCH4-208ENST00000490359 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
LRCH4-208ENST00000490359 LRRC59Q96AG4 307 aaKnown RBP24.44■■□□□ 1.5
LRCH4-208ENST00000490359 C14orf93Q9H972 538 aaKnown RBP24.44■■□□□ 1.5
LRCH4-208ENST00000490359 LRPPRCP42704 1394 aaKnown RBP24.42■■□□□ 1.5
LRCH4-208ENST00000490359 ASXL1Q8IXJ9 1541 aa24.42■■□□□ 1.5
LRCH4-208ENST00000490359 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
LRCH4-208ENST00000490359 BRINP3Q76B58 766 aa24.41■■□□□ 1.5
LRCH4-208ENST00000490359 NUTM2BA6NNL0 878 aaPredicted RBP24.39■■□□□ 1.49
LRCH4-208ENST00000490359 NUTM2EB1AL46 878 aaPredicted RBP24.39■■□□□ 1.49
LRCH4-208ENST00000490359 NUTM2AQ8IVF1 878 aaPredicted RBP24.39■■□□□ 1.49
LRCH4-208ENST00000490359 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.49
LRCH4-208ENST00000490359 NALCNQ8IZF0 1738 aa24.38■■□□□ 1.49
LRCH4-208ENST00000490359 TECPR2O15040 1411 aa24.38■■□□□ 1.49
LRCH4-208ENST00000490359 YTHDC2Q9H6S0 1430 aaKnown RBP24.38■■□□□ 1.49
LRCH4-208ENST00000490359 STAC3Q96MF2 364 aa24.38■■□□□ 1.49
LRCH4-208ENST00000490359 LAMC1P11047 1609 aa24.38■■□□□ 1.49
LRCH4-208ENST00000490359 ABCC11Q96J66 1382 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms