RNA–Protein interactions for RNA: ENST00000490008.1

COMMD2-206, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-206ENST00000490008 ZNF142P52746 1687 aaPredicted RBP20.7■□□□□ 0.91
COMMD2-206ENST00000490008 KDM2AQ9Y2K7 1162 aa20.69■□□□□ 0.9
COMMD2-206ENST00000490008 CLTCL1P53675 1640 aa20.68■□□□□ 0.9
COMMD2-206ENST00000490008 UBR1Q8IWV7 1749 aa20.68■□□□□ 0.9
COMMD2-206ENST00000490008 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
COMMD2-206ENST00000490008 SCAF11Q99590 1463 aaKnown RBP20.67■□□□□ 0.9
COMMD2-206ENST00000490008 ARHGAP23Q9P227 1491 aa20.67■□□□□ 0.9
COMMD2-206ENST00000490008 SLIT1O75093 1534 aa20.67■□□□□ 0.9
COMMD2-206ENST00000490008 TMEM131LA2VDJ0 1609 aa20.67■□□□□ 0.9
COMMD2-206ENST00000490008 SLC26A8Q96RN1 970 aa20.66■□□□□ 0.9
COMMD2-206ENST00000490008 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
COMMD2-206ENST00000490008 STAC3Q96MF2 364 aa20.65■□□□□ 0.9
COMMD2-206ENST00000490008 KDM5AP29375 1690 aaKnown RBP20.64■□□□□ 0.89
COMMD2-206ENST00000490008 SPATA31E1Q6ZUB1 1445 aa20.63■□□□□ 0.89
COMMD2-206ENST00000490008 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
COMMD2-206ENST00000490008 PLEKHG1Q9ULL1 1385 aa20.61■□□□□ 0.89
COMMD2-206ENST00000490008 CLSPNQ9HAW4 1339 aa20.61■□□□□ 0.89
COMMD2-206ENST00000490008 TBX22Q9Y458 520 aa20.61■□□□□ 0.89
COMMD2-206ENST00000490008 KIF1BO60333 1816 aa20.61■□□□□ 0.89
COMMD2-206ENST00000490008 MED14O60244 1454 aa20.6■□□□□ 0.89
COMMD2-206ENST00000490008 ADGRF5Q8IZF2 1346 aa20.59■□□□□ 0.89
COMMD2-206ENST00000490008 L3MBTL2Q969R5 705 aa20.59■□□□□ 0.89
COMMD2-206ENST00000490008 STRCQ7RTU9 1775 aa20.56■□□□□ 0.88
COMMD2-206ENST00000490008 TONSLQ96HA7 1378 aa20.56■□□□□ 0.88
COMMD2-206ENST00000490008 ZNF335Q9H4Z2 1342 aaPredicted RBP20.53■□□□□ 0.88
COMMD2-206ENST00000490008 NEURL4Q96JN8 1562 aa20.52■□□□□ 0.88
COMMD2-206ENST00000490008 KCNA6P17658 529 aa20.52■□□□□ 0.88
COMMD2-206ENST00000490008 MYO5BQ9ULV0 1848 aa20.52■□□□□ 0.88
COMMD2-206ENST00000490008 NEXMIFQ5QGS0 1516 aa20.52■□□□□ 0.87
COMMD2-206ENST00000490008 C14orf93Q9H972 538 aaKnown RBP20.51■□□□□ 0.87
COMMD2-206ENST00000490008 CFAP70Q5T0N1 1121 aa20.5■□□□□ 0.87
COMMD2-206ENST00000490008 TIMELESSQ9UNS1 1208 aa20.5■□□□□ 0.87
COMMD2-206ENST00000490008 AMOTL2Q9Y2J4 779 aa20.49■□□□□ 0.87
COMMD2-206ENST00000490008 POLR1AO95602 1720 aaPredicted RBP20.47■□□□□ 0.87
COMMD2-206ENST00000490008 TMEM132EQ6IEE7 984 aa20.47■□□□□ 0.87
COMMD2-206ENST00000490008 PROSER2Q86WR7 435 aaPredicted RBP20.47■□□□□ 0.87
COMMD2-206ENST00000490008 IQGAP1P46940 1657 aa20.47■□□□□ 0.87
COMMD2-206ENST00000490008 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
COMMD2-206ENST00000490008 STK26Q9P289 416 aa20.46■□□□□ 0.87
COMMD2-206ENST00000490008 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
COMMD2-206ENST00000490008 METP08581 1390 aa20.44■□□□□ 0.86
COMMD2-206ENST00000490008 CERKQ8TCT0 537 aa20.43■□□□□ 0.86
COMMD2-206ENST00000490008 MYOM2P54296 1465 aa20.43■□□□□ 0.86
COMMD2-206ENST00000490008 C14orf37Q86TY3 774 aa20.41■□□□□ 0.86
COMMD2-206ENST00000490008 PIK3C2GO75747 1445 aa20.41■□□□□ 0.86
COMMD2-206ENST00000490008 PPLO60437 1756 aa20.4■□□□□ 0.86
COMMD2-206ENST00000490008 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
COMMD2-206ENST00000490008 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
COMMD2-206ENST00000490008 RBM33Q96EV2 1170 aaKnown RBP20.38■□□□□ 0.85
COMMD2-206ENST00000490008 NRXN1Q9ULB1 1477 aa20.37■□□□□ 0.85
COMMD2-206ENST00000490008 NBPF1Q3BBV0 1214 aa20.37■□□□□ 0.85
COMMD2-206ENST00000490008 DIP2AQ14689 1571 aa20.37■□□□□ 0.85
COMMD2-206ENST00000490008 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
COMMD2-206ENST00000490008 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
COMMD2-206ENST00000490008 POGKQ9P215 609 aa20.35■□□□□ 0.85
COMMD2-206ENST00000490008 PRAG1Q86YV5 1406 aa20.35■□□□□ 0.85
COMMD2-206ENST00000490008 PTPRUQ92729 1446 aa20.34■□□□□ 0.85
COMMD2-206ENST00000490008 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
COMMD2-206ENST00000490008 CPS1P31327 1500 aa20.33■□□□□ 0.85
COMMD2-206ENST00000490008 SIRT1Q96EB6 747 aa20.32■□□□□ 0.84
COMMD2-206ENST00000490008 TMEM94Q12767 1356 aa20.32■□□□□ 0.84
COMMD2-206ENST00000490008 ABCC11Q96J66 1382 aa20.32■□□□□ 0.84
COMMD2-206ENST00000490008 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
COMMD2-206ENST00000490008 YTHDC2Q9H6S0 1430 aaKnown RBP20.31■□□□□ 0.84
COMMD2-206ENST00000490008 WAPLQ7Z5K2 1190 aa20.31■□□□□ 0.84
COMMD2-206ENST00000490008 ROCK2O75116 1388 aaKnown RBP20.31■□□□□ 0.84
COMMD2-206ENST00000490008 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
COMMD2-206ENST00000490008 NRXN3Q9Y4C0 1643 aa20.3■□□□□ 0.84
COMMD2-206ENST00000490008 LTBP4Q8N2S1 1624 aa20.29■□□□□ 0.84
COMMD2-206ENST00000490008 C19orf44Q9H6X5 657 aa20.29■□□□□ 0.84
COMMD2-206ENST00000490008 TOM1O60784 492 aa20.28■□□□□ 0.84
COMMD2-206ENST00000490008 ATF3P18847 181 aa20.28■□□□□ 0.84
COMMD2-206ENST00000490008 SAFB2Q14151 953 aaKnown RBP eCLIP20.28■□□□□ 0.84
COMMD2-206ENST00000490008 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
COMMD2-206ENST00000490008 LRRC7Q96NW7 1537 aa20.27■□□□□ 0.84
COMMD2-206ENST00000490008 UBAP1LF5GYI3 381 aa20.27■□□□□ 0.84
COMMD2-206ENST00000490008 NKTRP30414 1462 aaKnown RBP20.26■□□□□ 0.83
COMMD2-206ENST00000490008 ROBO2Q9HCK4 1378 aa20.26■□□□□ 0.83
COMMD2-206ENST00000490008 MSH6P52701 1360 aa20.25■□□□□ 0.83
COMMD2-206ENST00000490008 NCOA3Q9Y6Q9 1424 aa20.25■□□□□ 0.83
COMMD2-206ENST00000490008 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
COMMD2-206ENST00000490008 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
COMMD2-206ENST00000490008 SCAF1Q9H7N4 1312 aaKnown RBP20.22■□□□□ 0.83
COMMD2-206ENST00000490008 LAMC1P11047 1609 aa20.21■□□□□ 0.83
COMMD2-206ENST00000490008 NWD1Q149M9 1564 aa20.21■□□□□ 0.83
COMMD2-206ENST00000490008 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
COMMD2-206ENST00000490008 FAM135BQ49AJ0 1406 aa20.2■□□□□ 0.82
COMMD2-206ENST00000490008 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
COMMD2-206ENST00000490008 TECPR2O15040 1411 aa20.19■□□□□ 0.82
COMMD2-206ENST00000490008 SLAIN2Q9P270 581 aa20.19■□□□□ 0.82
COMMD2-206ENST00000490008 MINK1Q8N4C8 1332 aaPredicted RBP20.19■□□□□ 0.82
COMMD2-206ENST00000490008 PLEKHH1Q9ULM0 1364 aa20.19■□□□□ 0.82
COMMD2-206ENST00000490008 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
COMMD2-206ENST00000490008 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
COMMD2-206ENST00000490008 CENPJQ9HC77 1338 aaPredicted RBP20.18■□□□□ 0.82
COMMD2-206ENST00000490008 STRCP1A6NGW2 1772 aa20.18■□□□□ 0.82
COMMD2-206ENST00000490008 IQSEC2Q5JU85 1478 aa20.18■□□□□ 0.82
COMMD2-206ENST00000490008 HIRIP3Q9BW71 556 aaPredicted RBP20.17■□□□□ 0.82
COMMD2-206ENST00000490008 EIF3AQ14152 1382 aaKnown RBP20.17■□□□□ 0.82
COMMD2-206ENST00000490008 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms