RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.23
GGA1-222ENST00000489772 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
GGA1-222ENST00000489772 BCANQ96GW7 911 aa16.51■□□□□ 0.23
GGA1-222ENST00000489772 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
GGA1-222ENST00000489772 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
GGA1-222ENST00000489772 CPS1P31327 1500 aa16.49■□□□□ 0.23
GGA1-222ENST00000489772 TMEM131LA2VDJ0 1609 aa16.49■□□□□ 0.23
GGA1-222ENST00000489772 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
GGA1-222ENST00000489772 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
GGA1-222ENST00000489772 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
GGA1-222ENST00000489772 SLC26A8Q96RN1 970 aa16.47■□□□□ 0.23
GGA1-222ENST00000489772 TRPM2O94759 1503 aa16.46■□□□□ 0.23
GGA1-222ENST00000489772 PLEKHG1Q9ULL1 1385 aa16.46■□□□□ 0.23
GGA1-222ENST00000489772 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
GGA1-222ENST00000489772 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
GGA1-222ENST00000489772 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
GGA1-222ENST00000489772 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
GGA1-222ENST00000489772 MAPK8IP2Q13387 824 aaPredicted RBP16.43■□□□□ 0.22
GGA1-222ENST00000489772 KCNA6P17658 529 aa16.42■□□□□ 0.22
GGA1-222ENST00000489772 HRCP23327 699 aa16.4■□□□□ 0.22
GGA1-222ENST00000489772 TBX22Q9Y458 520 aa16.4■□□□□ 0.22
GGA1-222ENST00000489772 CLTCL1P53675 1640 aa16.4■□□□□ 0.22
GGA1-222ENST00000489772 TOM1O60784 492 aa16.39■□□□□ 0.21
GGA1-222ENST00000489772 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
GGA1-222ENST00000489772 CCDC144AA2RUR9 1427 aa16.39■□□□□ 0.21
GGA1-222ENST00000489772 RPGRIP1LQ68CZ1 1315 aa16.37■□□□□ 0.21
GGA1-222ENST00000489772 MYO5BQ9ULV0 1848 aa16.37■□□□□ 0.21
GGA1-222ENST00000489772 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
GGA1-222ENST00000489772 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
GGA1-222ENST00000489772 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
GGA1-222ENST00000489772 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
GGA1-222ENST00000489772 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.21
GGA1-222ENST00000489772 PIP4K2BP78356 416 aa16.33■□□□□ 0.2
GGA1-222ENST00000489772 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
GGA1-222ENST00000489772 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
GGA1-222ENST00000489772 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
GGA1-222ENST00000489772 NKTRP30414 1462 aaKnown RBP16.32■□□□□ 0.2
GGA1-222ENST00000489772 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
GGA1-222ENST00000489772 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
GGA1-222ENST00000489772 KIF1BO60333 1816 aa16.31■□□□□ 0.2
GGA1-222ENST00000489772 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
GGA1-222ENST00000489772 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
GGA1-222ENST00000489772 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
GGA1-222ENST00000489772 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
GGA1-222ENST00000489772 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
GGA1-222ENST00000489772 METP08581 1390 aa16.27■□□□□ 0.19
GGA1-222ENST00000489772 ANKRD30BQ9BXX2 1392 aa16.27■□□□□ 0.19
GGA1-222ENST00000489772 MSH6P52701 1360 aa16.26■□□□□ 0.19
GGA1-222ENST00000489772 C14orf37Q86TY3 774 aa16.26■□□□□ 0.19
GGA1-222ENST00000489772 NRXN3Q9Y4C0 1643 aa16.25■□□□□ 0.19
GGA1-222ENST00000489772 PTPRUQ92729 1446 aa16.24■□□□□ 0.19
GGA1-222ENST00000489772 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
GGA1-222ENST00000489772 ADGRF5Q8IZF2 1346 aa16.23■□□□□ 0.19
GGA1-222ENST00000489772 CHD2O14647 1828 aaKnown RBP16.23■□□□□ 0.19
GGA1-222ENST00000489772 ALKQ9UM73 1620 aa16.22■□□□□ 0.19
GGA1-222ENST00000489772 HSPA1LP34931 641 aa16.22■□□□□ 0.19
GGA1-222ENST00000489772 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
GGA1-222ENST00000489772 ATF3P18847 181 aa16.19■□□□□ 0.18
GGA1-222ENST00000489772 TRIM26Q12899 539 aaPredicted RBP16.19■□□□□ 0.18
GGA1-222ENST00000489772 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
GGA1-222ENST00000489772 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
GGA1-222ENST00000489772 PPLO60437 1756 aa16.19■□□□□ 0.18
GGA1-222ENST00000489772 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
GGA1-222ENST00000489772 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
GGA1-222ENST00000489772 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
GGA1-222ENST00000489772 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
GGA1-222ENST00000489772 MYOM2P54296 1465 aa16.15■□□□□ 0.18
GGA1-222ENST00000489772 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
GGA1-222ENST00000489772 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
GGA1-222ENST00000489772 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
GGA1-222ENST00000489772 C14orf93Q9H972 538 aaKnown RBP16.13■□□□□ 0.17
GGA1-222ENST00000489772 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
GGA1-222ENST00000489772 NRXN1Q9ULB1 1477 aa16.13■□□□□ 0.17
GGA1-222ENST00000489772 TMEM132EQ6IEE7 984 aa16.13■□□□□ 0.17
GGA1-222ENST00000489772 STK26Q9P289 416 aa16.13■□□□□ 0.17
GGA1-222ENST00000489772 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
GGA1-222ENST00000489772 DCCP43146 1447 aa16.12■□□□□ 0.17
GGA1-222ENST00000489772 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
GGA1-222ENST00000489772 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
GGA1-222ENST00000489772 LRPPRCP42704 1394 aaKnown RBP16.11■□□□□ 0.17
GGA1-222ENST00000489772 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
GGA1-222ENST00000489772 SETD1AO15047 1707 aaKnown RBP16.11■□□□□ 0.17
GGA1-222ENST00000489772 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
GGA1-222ENST00000489772 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
GGA1-222ENST00000489772 DHX57Q6P158 1386 aaKnown RBP16.09■□□□□ 0.17
GGA1-222ENST00000489772 TECPR2O15040 1411 aa16.08■□□□□ 0.16
GGA1-222ENST00000489772 YTHDC2Q9H6S0 1430 aaKnown RBP16.08■□□□□ 0.16
GGA1-222ENST00000489772 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.16
GGA1-222ENST00000489772 ROBO1Q9Y6N7 1651 aa16.06■□□□□ 0.16
GGA1-222ENST00000489772 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
GGA1-222ENST00000489772 WAPLQ7Z5K2 1190 aa16.06■□□□□ 0.16
GGA1-222ENST00000489772 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
GGA1-222ENST00000489772 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
GGA1-222ENST00000489772 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
GGA1-222ENST00000489772 MST1RQ04912 1400 aa16.05■□□□□ 0.16
GGA1-222ENST00000489772 LAMC1P11047 1609 aa16.03■□□□□ 0.16
GGA1-222ENST00000489772 PLEKHH1Q9ULM0 1364 aa16.02■□□□□ 0.15
GGA1-222ENST00000489772 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
GGA1-222ENST00000489772 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
GGA1-222ENST00000489772 PRAM1Q96QH2 718 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms