RNA–Protein interactions for RNA: ENST00000489551.5

CSF3R-213, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 1 (best)

Gene CSF3R, Length 787 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-213ENST00000489551 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
CSF3R-213ENST00000489551 ZFYVE9O95405 1425 aa15.69■□□□□ 0.1
CSF3R-213ENST00000489551 KCNA6P17658 529 aa15.69■□□□□ 0.1
CSF3R-213ENST00000489551 RGS17Q9UGC6 210 aaPredicted RBP15.69■□□□□ 0.1
CSF3R-213ENST00000489551 RPRD2Q5VT52 1461 aaKnown RBP15.68■□□□□ 0.1
CSF3R-213ENST00000489551 FAM135BQ49AJ0 1406 aa15.68■□□□□ 0.1
CSF3R-213ENST00000489551 SLC52A1Q9NWF4 448 aa15.67■□□□□ 0.1
CSF3R-213ENST00000489551 PROSER2Q86WR7 435 aaPredicted RBP15.65■□□□□ 0.1
CSF3R-213ENST00000489551 PHF23Q9BUL5 403 aaPredicted RBP15.65■□□□□ 0.1
CSF3R-213ENST00000489551 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
CSF3R-213ENST00000489551 NKTRP30414 1462 aaKnown RBP15.64■□□□□ 0.09
CSF3R-213ENST00000489551 RIMS2Q9UQ26 1411 aa15.63■□□□□ 0.09
CSF3R-213ENST00000489551 PLEKHG1Q9ULL1 1385 aa15.62■□□□□ 0.09
CSF3R-213ENST00000489551 PHLPP1O60346 1717 aa15.6■□□□□ 0.09
CSF3R-213ENST00000489551 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
CSF3R-213ENST00000489551 NUTM2DQ5VT03 806 aaPredicted RBP15.58■□□□□ 0.08
CSF3R-213ENST00000489551 BCANQ96GW7 911 aa15.58■□□□□ 0.08
CSF3R-213ENST00000489551 ROCK1Q13464 1354 aa15.58■□□□□ 0.08
CSF3R-213ENST00000489551 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.57■□□□□ 0.08
CSF3R-213ENST00000489551 TBX22Q9Y458 520 aa15.57■□□□□ 0.08
CSF3R-213ENST00000489551 POTEAQ6S8J7 498 aa15.56■□□□□ 0.08
CSF3R-213ENST00000489551 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
CSF3R-213ENST00000489551 COL16A1Q07092 1604 aaPredicted RBP15.56■□□□□ 0.08
CSF3R-213ENST00000489551 NRXN3Q9Y4C0 1643 aa15.55■□□□□ 0.08
CSF3R-213ENST00000489551 MSH6P52701 1360 aa15.55■□□□□ 0.08
CSF3R-213ENST00000489551 SPHKAPQ2M3C7 1700 aa15.54■□□□□ 0.08
CSF3R-213ENST00000489551 PPP1R15AO75807 674 aaPredicted RBP15.54■□□□□ 0.08
CSF3R-213ENST00000489551 CHGAP10645 457 aaKnown RBP15.54■□□□□ 0.08
CSF3R-213ENST00000489551 PPARGC1BQ86YN6 1023 aaKnown RBP15.54■□□□□ 0.08
CSF3R-213ENST00000489551 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
CSF3R-213ENST00000489551 PTPRUQ92729 1446 aa15.53■□□□□ 0.08
CSF3R-213ENST00000489551 NUP155O75694 1391 aa15.53■□□□□ 0.08
CSF3R-213ENST00000489551 ITGAEP38570 1179 aa15.51■□□□□ 0.07
CSF3R-213ENST00000489551 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
CSF3R-213ENST00000489551 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
CSF3R-213ENST00000489551 SETD1AO15047 1707 aaKnown RBP15.51■□□□□ 0.07
CSF3R-213ENST00000489551 NCOA3Q9Y6Q9 1424 aa15.51■□□□□ 0.07
CSF3R-213ENST00000489551 XRN1Q8IZH2 1706 aaKnown RBP15.5■□□□□ 0.07
CSF3R-213ENST00000489551 TRPM2O94759 1503 aa15.48■□□□□ 0.07
CSF3R-213ENST00000489551 LRP6O75581 1613 aa15.48■□□□□ 0.07
CSF3R-213ENST00000489551 PIK3R4Q99570 1358 aa15.48■□□□□ 0.07
CSF3R-213ENST00000489551 JCADQ9P266 1359 aa15.48■□□□□ 0.07
CSF3R-213ENST00000489551 AHDC1Q5TGY3 1603 aaPredicted RBP15.47■□□□□ 0.07
CSF3R-213ENST00000489551 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
CSF3R-213ENST00000489551 SHPRHQ149N8 1683 aa15.47■□□□□ 0.07
CSF3R-213ENST00000489551 CLTCL1P53675 1640 aa15.46■□□□□ 0.07
CSF3R-213ENST00000489551 C19orf44Q9H6X5 657 aa15.46■□□□□ 0.07
CSF3R-213ENST00000489551 AMOTL2Q9Y2J4 779 aa15.46■□□□□ 0.07
CSF3R-213ENST00000489551 NEXMIFQ5QGS0 1516 aa15.44■□□□□ 0.06
CSF3R-213ENST00000489551 KIF1BO60333 1816 aa15.44■□□□□ 0.06
CSF3R-213ENST00000489551 C14orf37Q86TY3 774 aa15.43■□□□□ 0.06
CSF3R-213ENST00000489551 METP08581 1390 aa15.43■□□□□ 0.06
CSF3R-213ENST00000489551 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
CSF3R-213ENST00000489551 NALCNQ8IZF0 1738 aa15.42■□□□□ 0.06
CSF3R-213ENST00000489551 NHSL1Q5SYE7 1610 aa15.42■□□□□ 0.06
CSF3R-213ENST00000489551 BRINP3Q76B58 766 aa15.41■□□□□ 0.06
CSF3R-213ENST00000489551 ATF3P18847 181 aa15.4■□□□□ 0.06
CSF3R-213ENST00000489551 NAIPQ13075 1403 aa15.4■□□□□ 0.06
CSF3R-213ENST00000489551 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
CSF3R-213ENST00000489551 MST1RQ04912 1400 aa15.39■□□□□ 0.05
CSF3R-213ENST00000489551 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
CSF3R-213ENST00000489551 DCCP43146 1447 aa15.38■□□□□ 0.05
CSF3R-213ENST00000489551 SPATA31A6Q5VVP1 1343 aa15.38■□□□□ 0.05
CSF3R-213ENST00000489551 ZNF326Q5BKZ1 582 aaKnown RBP15.37■□□□□ 0.05
CSF3R-213ENST00000489551 PPLO60437 1756 aa15.35■□□□□ 0.05
CSF3R-213ENST00000489551 DDX17Q92841 729 aaKnown RBP15.35■□□□□ 0.05
CSF3R-213ENST00000489551 SETD5Q9C0A6 1442 aa15.34■□□□□ 0.05
CSF3R-213ENST00000489551 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
CSF3R-213ENST00000489551 LAMC1P11047 1609 aa15.32■□□□□ 0.04
CSF3R-213ENST00000489551 MEX3CQ5U5Q3 659 aaKnown RBP15.31■□□□□ 0.04
CSF3R-213ENST00000489551 NUTM2BA6NNL0 878 aaPredicted RBP15.3■□□□□ 0.04
CSF3R-213ENST00000489551 NUTM2EB1AL46 878 aaPredicted RBP15.3■□□□□ 0.04
CSF3R-213ENST00000489551 NUTM2AQ8IVF1 878 aaPredicted RBP15.3■□□□□ 0.04
CSF3R-213ENST00000489551 ROBO2Q9HCK4 1378 aa15.3■□□□□ 0.04
CSF3R-213ENST00000489551 HFM1A2PYH4 1435 aa15.29■□□□□ 0.04
CSF3R-213ENST00000489551 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
CSF3R-213ENST00000489551 C1orf167Q5SNV9 1468 aa15.28■□□□□ 0.04
CSF3R-213ENST00000489551 PNPLA6Q8IY17 1366 aa15.28■□□□□ 0.04
CSF3R-213ENST00000489551 TRIM52Q96A61 297 aa15.28■□□□□ 0.04
CSF3R-213ENST00000489551 PTCH1Q13635 1447 aa15.27■□□□□ 0.04
CSF3R-213ENST00000489551 UPF1Q92900 1129 aaKnown RBP eCLIP15.27■□□□□ 0.04
CSF3R-213ENST00000489551 PRAG1Q86YV5 1406 aa15.26■□□□□ 0.03
CSF3R-213ENST00000489551 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
CSF3R-213ENST00000489551 AFF2P51816 1311 aa15.26■□□□□ 0.03
CSF3R-213ENST00000489551 LRRC59Q96AG4 307 aaKnown RBP15.26■□□□□ 0.03
CSF3R-213ENST00000489551 ORAI2Q96SN7 254 aa15.26■□□□□ 0.03
CSF3R-213ENST00000489551 FOXD1Q16676 465 aa15.25■□□□□ 0.03
CSF3R-213ENST00000489551 VGFO15240 615 aaPredicted RBP15.24■□□□□ 0.03
CSF3R-213ENST00000489551 RXRBP28702 533 aa15.24■□□□□ 0.03
CSF3R-213ENST00000489551 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
CSF3R-213ENST00000489551 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
CSF3R-213ENST00000489551 RPGRIP1LQ68CZ1 1315 aa15.22■□□□□ 0.03
CSF3R-213ENST00000489551 SOS2Q07890 1332 aaPredicted RBP15.21■□□□□ 0.03
CSF3R-213ENST00000489551 RGS12O14924 1447 aa15.21■□□□□ 0.03
CSF3R-213ENST00000489551 C8orf37Q96NL8 207 aa15.21■□□□□ 0.03
CSF3R-213ENST00000489551 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.02
CSF3R-213ENST00000489551 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
CSF3R-213ENST00000489551 SPATA31E1Q6ZUB1 1445 aa15.19■□□□□ 0.02
CSF3R-213ENST00000489551 QTRT2Q9H974 415 aaKnown RBP15.19■□□□□ 0.02
CSF3R-213ENST00000489551 MARF1Q9Y4F3 1742 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms