RNA–Protein interactions for RNA: ENST00000489541.1

C1S-214, Transcript of complement C1s, humanhuman

TSL 3

Gene C1S, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-214ENST00000489541 FAM135BQ49AJ0 1406 aa25.69■■□□□ 1.7
C1S-214ENST00000489541 TMEM131LA2VDJ0 1609 aa25.68■■□□□ 1.7
C1S-214ENST00000489541 PHF23Q9BUL5 403 aaPredicted RBP25.68■■□□□ 1.7
C1S-214ENST00000489541 GCC2Q8IWJ2 1684 aa25.68■■□□□ 1.7
C1S-214ENST00000489541 PROSER2Q86WR7 435 aaPredicted RBP25.66■■□□□ 1.7
C1S-214ENST00000489541 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
C1S-214ENST00000489541 E9PCH4 1651 aa25.64■■□□□ 1.7
C1S-214ENST00000489541 RGS17Q9UGC6 210 aaPredicted RBP25.64■■□□□ 1.7
C1S-214ENST00000489541 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
C1S-214ENST00000489541 RIMS2Q9UQ26 1411 aa25.63■■□□□ 1.69
C1S-214ENST00000489541 ROBO1Q9Y6N7 1651 aa25.62■■□□□ 1.69
C1S-214ENST00000489541 ROCK1Q13464 1354 aa25.62■■□□□ 1.69
C1S-214ENST00000489541 CHD2O14647 1828 aaKnown RBP25.62■■□□□ 1.69
C1S-214ENST00000489541 IQGAP3Q86VI3 1631 aa25.59■■□□□ 1.69
C1S-214ENST00000489541 BCANQ96GW7 911 aa25.59■■□□□ 1.69
C1S-214ENST00000489541 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
C1S-214ENST00000489541 NUTM2DQ5VT03 806 aaPredicted RBP25.55■■□□□ 1.68
C1S-214ENST00000489541 PPP1R15AO75807 674 aaPredicted RBP25.54■■□□□ 1.68
C1S-214ENST00000489541 TBX22Q9Y458 520 aa25.54■■□□□ 1.68
C1S-214ENST00000489541 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
C1S-214ENST00000489541 MSH6P52701 1360 aa25.53■■□□□ 1.68
C1S-214ENST00000489541 HDGFP51858 240 aaKnown RBP25.51■■□□□ 1.67
C1S-214ENST00000489541 SLAIN2Q9P270 581 aa25.51■■□□□ 1.67
C1S-214ENST00000489541 NUP155O75694 1391 aa25.51■■□□□ 1.67
C1S-214ENST00000489541 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
C1S-214ENST00000489541 ITGAEP38570 1179 aa25.49■■□□□ 1.67
C1S-214ENST00000489541 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.49■■□□□ 1.67
C1S-214ENST00000489541 PHLPP1O60346 1717 aa25.46■■□□□ 1.67
C1S-214ENST00000489541 DIP2AQ14689 1571 aa25.45■■□□□ 1.66
C1S-214ENST00000489541 POTEAQ6S8J7 498 aa25.45■■□□□ 1.66
C1S-214ENST00000489541 NCOA3Q9Y6Q9 1424 aa25.45■■□□□ 1.66
C1S-214ENST00000489541 PTPRUQ92729 1446 aa25.44■■□□□ 1.66
C1S-214ENST00000489541 PIK3R4Q99570 1358 aa25.43■■□□□ 1.66
C1S-214ENST00000489541 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.42■■□□□ 1.66
C1S-214ENST00000489541 COL16A1Q07092 1604 aaPredicted RBP25.41■■□□□ 1.66
C1S-214ENST00000489541 NRXN3Q9Y4C0 1643 aa25.41■■□□□ 1.66
C1S-214ENST00000489541 SPHKAPQ2M3C7 1700 aa25.39■■□□□ 1.65
C1S-214ENST00000489541 TRPM2O94759 1503 aa25.38■■□□□ 1.65
C1S-214ENST00000489541 JCADQ9P266 1359 aa25.38■■□□□ 1.65
C1S-214ENST00000489541 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
C1S-214ENST00000489541 C19orf44Q9H6X5 657 aa25.36■■□□□ 1.65
C1S-214ENST00000489541 C14orf37Q86TY3 774 aa25.35■■□□□ 1.65
C1S-214ENST00000489541 SETBP1Q9Y6X0 1596 aa25.34■■□□□ 1.65
C1S-214ENST00000489541 XRN1Q8IZH2 1706 aaKnown RBP25.34■■□□□ 1.65
C1S-214ENST00000489541 CADPS2Q86UW7 1296 aa25.33■■□□□ 1.65
C1S-214ENST00000489541 LRP6O75581 1613 aa25.32■■□□□ 1.64
C1S-214ENST00000489541 AHDC1Q5TGY3 1603 aaPredicted RBP25.32■■□□□ 1.64
C1S-214ENST00000489541 CLTCL1P53675 1640 aa25.3■■□□□ 1.64
C1S-214ENST00000489541 RRBP1Q9P2E9 1410 aaKnown RBP25.3■■□□□ 1.64
C1S-214ENST00000489541 METP08581 1390 aa25.3■■□□□ 1.64
C1S-214ENST00000489541 ATF3P18847 181 aa25.29■■□□□ 1.64
C1S-214ENST00000489541 NAIPQ13075 1403 aa25.28■■□□□ 1.64
C1S-214ENST00000489541 NEXMIFQ5QGS0 1516 aa25.27■■□□□ 1.64
C1S-214ENST00000489541 BRINP3Q76B58 766 aa25.27■■□□□ 1.64
C1S-214ENST00000489541 ZNF326Q5BKZ1 582 aaKnown RBP25.26■■□□□ 1.63
C1S-214ENST00000489541 SETD1AO15047 1707 aaKnown RBP25.24■■□□□ 1.63
C1S-214ENST00000489541 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
C1S-214ENST00000489541 DCCP43146 1447 aa25.24■■□□□ 1.63
C1S-214ENST00000489541 SPATA31A6Q5VVP1 1343 aa25.23■■□□□ 1.63
C1S-214ENST00000489541 MST1RQ04912 1400 aa25.22■■□□□ 1.63
C1S-214ENST00000489541 ASXL1Q8IXJ9 1541 aa25.21■■□□□ 1.63
C1S-214ENST00000489541 KIF1BO60333 1816 aa25.19■■□□□ 1.62
C1S-214ENST00000489541 NALCNQ8IZF0 1738 aa25.17■■□□□ 1.62
C1S-214ENST00000489541 NHSL1Q5SYE7 1610 aa25.16■■□□□ 1.62
C1S-214ENST00000489541 ADGRL3Q9HAR2 1447 aa25.16■■□□□ 1.62
C1S-214ENST00000489541 SETD5Q9C0A6 1442 aa25.14■■□□□ 1.62
C1S-214ENST00000489541 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
C1S-214ENST00000489541 MEX3CQ5U5Q3 659 aaKnown RBP25.13■■□□□ 1.61
C1S-214ENST00000489541 DDX17Q92841 729 aaKnown RBP25.12■■□□□ 1.61
C1S-214ENST00000489541 ZNF772Q68DY9 489 aaPredicted RBP25.1■■□□□ 1.61
C1S-214ENST00000489541 NUTM2BA6NNL0 878 aaPredicted RBP25.09■■□□□ 1.61
C1S-214ENST00000489541 NUTM2EB1AL46 878 aaPredicted RBP25.09■■□□□ 1.61
C1S-214ENST00000489541 NUTM2AQ8IVF1 878 aaPredicted RBP25.09■■□□□ 1.61
C1S-214ENST00000489541 TRIM52Q96A61 297 aa25.09■■□□□ 1.61
C1S-214ENST00000489541 ROBO2Q9HCK4 1378 aa25.08■■□□□ 1.61
C1S-214ENST00000489541 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
C1S-214ENST00000489541 C1orf167Q5SNV9 1468 aa25.06■■□□□ 1.6
C1S-214ENST00000489541 PPLO60437 1756 aa25.05■■□□□ 1.6
C1S-214ENST00000489541 PRAG1Q86YV5 1406 aa25.05■■□□□ 1.6
C1S-214ENST00000489541 VGFO15240 615 aaPredicted RBP25.05■■□□□ 1.6
C1S-214ENST00000489541 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
C1S-214ENST00000489541 LRRC59Q96AG4 307 aaKnown RBP25.04■■□□□ 1.6
C1S-214ENST00000489541 PNPLA6Q8IY17 1366 aa25.04■■□□□ 1.6
C1S-214ENST00000489541 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
C1S-214ENST00000489541 LAMC1P11047 1609 aa25.02■■□□□ 1.6
C1S-214ENST00000489541 FOXD1Q16676 465 aa25.02■■□□□ 1.6
C1S-214ENST00000489541 AFF2P51816 1311 aa25.01■■□□□ 1.59
C1S-214ENST00000489541 RXRBP28702 533 aa24.99■■□□□ 1.59
C1S-214ENST00000489541 UPF1Q92900 1129 aaKnown RBP eCLIP24.99■■□□□ 1.59
C1S-214ENST00000489541 ORAI2Q96SN7 254 aa24.99■■□□□ 1.59
C1S-214ENST00000489541 CDK12Q9NYV4 1490 aaPredicted RBP24.96■■□□□ 1.59
C1S-214ENST00000489541 SOS2Q07890 1332 aaPredicted RBP24.95■■□□□ 1.58
C1S-214ENST00000489541 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
C1S-214ENST00000489541 C8orf37Q96NL8 207 aa24.94■■□□□ 1.58
C1S-214ENST00000489541 SPATA31E1Q6ZUB1 1445 aa24.93■■□□□ 1.58
C1S-214ENST00000489541 IFT172Q9UG01 1749 aa24.9■■□□□ 1.58
C1S-214ENST00000489541 RGS12O14924 1447 aa24.89■■□□□ 1.58
C1S-214ENST00000489541 ADAMTS2O95450 1211 aa24.89■■□□□ 1.58
C1S-214ENST00000489541 CDC42BPGQ6DT37 1551 aa24.88■■□□□ 1.57
C1S-214ENST00000489541 CCDC144AA2RUR9 1427 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms