RNA–Protein interactions for RNA: ENST00000489444.6

GBP3-207, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,455 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-207ENST00000489444 FBXO41Q8TF61 875 aa7.25□□□□□ -1.25
GBP3-207ENST00000489444 ACIN1Q9UKV3 1341 aaKnown RBP7.25□□□□□ -1.25
GBP3-207ENST00000489444 TMEM2Q9UHN6 1383 aa7.24□□□□□ -1.25
GBP3-207ENST00000489444 CPS1P31327 1500 aa7.24□□□□□ -1.25
GBP3-207ENST00000489444 STAG3Q9UJ98 1225 aa7.24□□□□□ -1.25
GBP3-207ENST00000489444 EID1Q9Y6B2 187 aa7.24□□□□□ -1.25
GBP3-207ENST00000489444 SPHKAPQ2M3C7 1700 aa7.23□□□□□ -1.25
GBP3-207ENST00000489444 IDI1Q13907 227 aa7.23□□□□□ -1.25
GBP3-207ENST00000489444 CFAP65Q6ZU64 1925 aaKnown RBP7.23□□□□□ -1.25
GBP3-207ENST00000489444 ILDR1Q86SU0 546 aaPredicted RBP7.23□□□□□ -1.25
GBP3-207ENST00000489444 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
GBP3-207ENST00000489444 TMEM131LA2VDJ0 1609 aa7.23□□□□□ -1.25
GBP3-207ENST00000489444 TRPM2O94759 1503 aa7.22□□□□□ -1.25
GBP3-207ENST00000489444 ZNF335Q9H4Z2 1342 aaPredicted RBP7.22□□□□□ -1.25
GBP3-207ENST00000489444 DAXXQ9UER7 740 aaPredicted RBP7.22□□□□□ -1.25
GBP3-207ENST00000489444 TXNDC2Q86VQ3 553 aa7.21□□□□□ -1.25
GBP3-207ENST00000489444 ZFYVE9O95405 1425 aa7.21□□□□□ -1.26
GBP3-207ENST00000489444 SCAF1Q9H7N4 1312 aaKnown RBP7.21□□□□□ -1.26
GBP3-207ENST00000489444 HDGFP51858 240 aaKnown RBP7.21□□□□□ -1.26
GBP3-207ENST00000489444 RIMS2Q9UQ26 1411 aa7.2□□□□□ -1.26
GBP3-207ENST00000489444 PRKCSHP14314 528 aaPredicted RBP7.2□□□□□ -1.26
GBP3-207ENST00000489444 LTKP29376 864 aa7.2□□□□□ -1.26
GBP3-207ENST00000489444 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.2□□□□□ -1.26
GBP3-207ENST00000489444 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
GBP3-207ENST00000489444 SETD5Q9C0A6 1442 aa7.2□□□□□ -1.26
GBP3-207ENST00000489444 PLEKHG1Q9ULL1 1385 aa7.19□□□□□ -1.26
GBP3-207ENST00000489444 CLTCL1P53675 1640 aa7.19□□□□□ -1.26
GBP3-207ENST00000489444 DIP2AQ14689 1571 aa7.19□□□□□ -1.26
GBP3-207ENST00000489444 MYO5BQ9ULV0 1848 aa7.19□□□□□ -1.26
GBP3-207ENST00000489444 MAPK8IP2Q13387 824 aaPredicted RBP7.18□□□□□ -1.26
GBP3-207ENST00000489444 NWD1Q149M9 1564 aa7.18□□□□□ -1.26
GBP3-207ENST00000489444 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
GBP3-207ENST00000489444 PPP1R15AO75807 674 aaPredicted RBP7.17□□□□□ -1.26
GBP3-207ENST00000489444 KIF1BO60333 1816 aa7.17□□□□□ -1.26
GBP3-207ENST00000489444 STRCP1A6NGW2 1772 aa7.17□□□□□ -1.26
GBP3-207ENST00000489444 LRRC7Q96NW7 1537 aa7.16□□□□□ -1.26
GBP3-207ENST00000489444 SLC4A2P04920 1241 aa7.16□□□□□ -1.26
GBP3-207ENST00000489444 NKTRP30414 1462 aaKnown RBP7.16□□□□□ -1.26
GBP3-207ENST00000489444 RAB3GAP2Q9H2M9 1393 aa7.16□□□□□ -1.26
GBP3-207ENST00000489444 PLCB2Q00722 1185 aa7.16□□□□□ -1.26
GBP3-207ENST00000489444 NEXMIFQ5QGS0 1516 aa7.15□□□□□ -1.26
GBP3-207ENST00000489444 SETBP1Q9Y6X0 1596 aa7.15□□□□□ -1.26
GBP3-207ENST00000489444 MPHOSPH9Q99550 1183 aa7.15□□□□□ -1.26
GBP3-207ENST00000489444 PIK3R4Q99570 1358 aa7.15□□□□□ -1.27
GBP3-207ENST00000489444 KCNA6P17658 529 aa7.15□□□□□ -1.27
GBP3-207ENST00000489444 BCANQ96GW7 911 aa7.15□□□□□ -1.27
GBP3-207ENST00000489444 RPGRIP1LQ68CZ1 1315 aa7.14□□□□□ -1.27
GBP3-207ENST00000489444 ZNF326Q5BKZ1 582 aaKnown RBP7.14□□□□□ -1.27
GBP3-207ENST00000489444 TBX22Q9Y458 520 aa7.14□□□□□ -1.27
GBP3-207ENST00000489444 CCDC144AA2RUR9 1427 aa7.14□□□□□ -1.27
GBP3-207ENST00000489444 ADAMTS13Q76LX8 1427 aa7.14□□□□□ -1.27
GBP3-207ENST00000489444 UBAP1LF5GYI3 381 aa7.13□□□□□ -1.27
GBP3-207ENST00000489444 NRXN3Q9Y4C0 1643 aa7.13□□□□□ -1.27
GBP3-207ENST00000489444 TOM1O60784 492 aa7.13□□□□□ -1.27
GBP3-207ENST00000489444 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
GBP3-207ENST00000489444 CHD2O14647 1828 aaKnown RBP7.13□□□□□ -1.27
GBP3-207ENST00000489444 NCOA3Q9Y6Q9 1424 aa7.12□□□□□ -1.27
GBP3-207ENST00000489444 PPLO60437 1756 aa7.12□□□□□ -1.27
GBP3-207ENST00000489444 RNF216Q9NWF9 866 aaPredicted RBP7.12□□□□□ -1.27
GBP3-207ENST00000489444 XIRP1Q702N8 1843 aaKnown RBP7.12□□□□□ -1.27
GBP3-207ENST00000489444 ALKQ9UM73 1620 aa7.11□□□□□ -1.27
GBP3-207ENST00000489444 VGFO15240 615 aaPredicted RBP7.11□□□□□ -1.27
GBP3-207ENST00000489444 NUTM2DQ5VT03 806 aaPredicted RBP7.11□□□□□ -1.27
GBP3-207ENST00000489444 TMEM94Q12767 1356 aa7.11□□□□□ -1.27
GBP3-207ENST00000489444 SPATA31E1Q6ZUB1 1445 aa7.11□□□□□ -1.27
GBP3-207ENST00000489444 XRN1Q8IZH2 1706 aaKnown RBP7.11□□□□□ -1.27
GBP3-207ENST00000489444 IFT172Q9UG01 1749 aa7.11□□□□□ -1.27
GBP3-207ENST00000489444 PROSER2Q86WR7 435 aaPredicted RBP7.1□□□□□ -1.27
GBP3-207ENST00000489444 ANKRD30BQ9BXX2 1392 aa7.1□□□□□ -1.27
GBP3-207ENST00000489444 SETD1AO15047 1707 aaKnown RBP7.09□□□□□ -1.27
GBP3-207ENST00000489444 PTPRUQ92729 1446 aa7.09□□□□□ -1.27
GBP3-207ENST00000489444 MSH6P52701 1360 aa7.09□□□□□ -1.27
GBP3-207ENST00000489444 PRAG1Q86YV5 1406 aa7.08□□□□□ -1.28
GBP3-207ENST00000489444 CACNB1Q02641 598 aaPredicted RBP7.08□□□□□ -1.28
GBP3-207ENST00000489444 MYOM2P54296 1465 aa7.08□□□□□ -1.28
GBP3-207ENST00000489444 ATXN8OSP0DMR3 200 aa7.08□□□□□ -1.28
GBP3-207ENST00000489444 ZEB1P37275 1124 aaPredicted RBP7.08□□□□□ -1.28
GBP3-207ENST00000489444 PIP4K2BP78356 416 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 AMOTL2Q9Y2J4 779 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 PTCH1Q13635 1447 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 METP08581 1390 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 HAP1P54257 671 aaPredicted RBP7.07□□□□□ -1.28
GBP3-207ENST00000489444 NRXN1Q9ULB1 1477 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 DCCP43146 1447 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 FAM135BQ49AJ0 1406 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 LAMC1P11047 1609 aa7.07□□□□□ -1.28
GBP3-207ENST00000489444 PIK3C2GO75747 1445 aa7.06□□□□□ -1.28
GBP3-207ENST00000489444 MYCNP04198 464 aaPredicted RBP7.05□□□□□ -1.28
GBP3-207ENST00000489444 TAOK2Q9UL54 1235 aa7.05□□□□□ -1.28
GBP3-207ENST00000489444 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.05□□□□□ -1.28
GBP3-207ENST00000489444 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
GBP3-207ENST00000489444 RGL3Q3MIN7 710 aa7.05□□□□□ -1.28
GBP3-207ENST00000489444 ROBO1Q9Y6N7 1651 aa7.05□□□□□ -1.28
GBP3-207ENST00000489444 ADGRF5Q8IZF2 1346 aa7.04□□□□□ -1.28
GBP3-207ENST00000489444 ADGRL3Q9HAR2 1447 aa7.04□□□□□ -1.28
GBP3-207ENST00000489444 HSPA1LP34931 641 aa7.04□□□□□ -1.28
GBP3-207ENST00000489444 TRIM26Q12899 539 aaPredicted RBP7.04□□□□□ -1.28
GBP3-207ENST00000489444 C14orf37Q86TY3 774 aa7.04□□□□□ -1.28
GBP3-207ENST00000489444 STAC3Q96MF2 364 aa7.04□□□□□ -1.28
GBP3-207ENST00000489444 C19orf44Q9H6X5 657 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms