RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 SLC4A1APQ9BWU0 796 aaKnown RBP28.45■■■□□ 2.14
MRPL55-230ENST00000489430 TOM1O60784 492 aa28.44■■■□□ 2.14
MRPL55-230ENST00000489430 TRPM2O94759 1503 aa28.43■■■□□ 2.14
MRPL55-230ENST00000489430 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
MRPL55-230ENST00000489430 SPHKAPQ2M3C7 1700 aa28.43■■■□□ 2.14
MRPL55-230ENST00000489430 KCNA6P17658 529 aa28.42■■■□□ 2.14
MRPL55-230ENST00000489430 SLC26A8Q96RN1 970 aa28.41■■■□□ 2.14
MRPL55-230ENST00000489430 BCANQ96GW7 911 aa28.39■■■□□ 2.14
MRPL55-230ENST00000489430 TBX22Q9Y458 520 aa28.39■■■□□ 2.14
MRPL55-230ENST00000489430 STRCP1A6NGW2 1772 aa28.37■■■□□ 2.13
MRPL55-230ENST00000489430 MYO5BQ9ULV0 1848 aa28.36■■■□□ 2.13
MRPL55-230ENST00000489430 SETD5Q9C0A6 1442 aa28.35■■■□□ 2.13
MRPL55-230ENST00000489430 PIK3R4Q99570 1358 aa28.33■■■□□ 2.13
MRPL55-230ENST00000489430 NKTRP30414 1462 aaKnown RBP28.33■■■□□ 2.13
MRPL55-230ENST00000489430 ZNF326Q5BKZ1 582 aaKnown RBP28.31■■■□□ 2.12
MRPL55-230ENST00000489430 MPHOSPH9Q99550 1183 aa28.31■■■□□ 2.12
MRPL55-230ENST00000489430 DIP2AQ14689 1571 aa28.31■■■□□ 2.12
MRPL55-230ENST00000489430 CLTCL1P53675 1640 aa28.31■■■□□ 2.12
MRPL55-230ENST00000489430 NWD1Q149M9 1564 aa28.3■■■□□ 2.12
MRPL55-230ENST00000489430 ADAMTS13Q76LX8 1427 aa28.3■■■□□ 2.12
MRPL55-230ENST00000489430 NUTM2DQ5VT03 806 aaPredicted RBP28.28■■■□□ 2.12
MRPL55-230ENST00000489430 TMEM94Q12767 1356 aa28.26■■■□□ 2.12
MRPL55-230ENST00000489430 PROSER2Q86WR7 435 aaPredicted RBP28.26■■■□□ 2.11
MRPL55-230ENST00000489430 RPGRIP1LQ68CZ1 1315 aa28.25■■■□□ 2.11
MRPL55-230ENST00000489430 PIP4K2BP78356 416 aa28.24■■■□□ 2.11
MRPL55-230ENST00000489430 ALKQ9UM73 1620 aa28.23■■■□□ 2.11
MRPL55-230ENST00000489430 HRCP23327 699 aa28.23■■■□□ 2.11
MRPL55-230ENST00000489430 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
MRPL55-230ENST00000489430 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
MRPL55-230ENST00000489430 SCAF1Q9H7N4 1312 aaKnown RBP28.21■■■□□ 2.11
MRPL55-230ENST00000489430 VGFO15240 615 aaPredicted RBP28.21■■■□□ 2.11
MRPL55-230ENST00000489430 NEXMIFQ5QGS0 1516 aa28.21■■■□□ 2.11
MRPL55-230ENST00000489430 RAB3GAP2Q9H2M9 1393 aa28.21■■■□□ 2.11
MRPL55-230ENST00000489430 CCDC144AA2RUR9 1427 aa28.2■■■□□ 2.11
MRPL55-230ENST00000489430 KIF1BO60333 1816 aa28.2■■■□□ 2.1
MRPL55-230ENST00000489430 FOXD1Q16676 465 aa28.19■■■□□ 2.1
MRPL55-230ENST00000489430 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
MRPL55-230ENST00000489430 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
MRPL55-230ENST00000489430 XIRP1Q702N8 1843 aaKnown RBP28.15■■■□□ 2.1
MRPL55-230ENST00000489430 MSH6P52701 1360 aa28.14■■■□□ 2.1
MRPL55-230ENST00000489430 HSPA1LP34931 641 aa28.13■■■□□ 2.09
MRPL55-230ENST00000489430 AMOTL2Q9Y2J4 779 aa28.13■■■□□ 2.09
MRPL55-230ENST00000489430 NRXN3Q9Y4C0 1643 aa28.13■■■□□ 2.09
MRPL55-230ENST00000489430 FAM135BQ49AJ0 1406 aa28.11■■■□□ 2.09
MRPL55-230ENST00000489430 SPATA31E1Q6ZUB1 1445 aa28.1■■■□□ 2.09
MRPL55-230ENST00000489430 PTPRUQ92729 1446 aa28.09■■■□□ 2.09
MRPL55-230ENST00000489430 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
MRPL55-230ENST00000489430 METP08581 1390 aa28.08■■■□□ 2.09
MRPL55-230ENST00000489430 ANKRD30BQ9BXX2 1392 aa28.07■■■□□ 2.08
MRPL55-230ENST00000489430 C19orf44Q9H6X5 657 aa28.06■■■□□ 2.08
MRPL55-230ENST00000489430 XRN1Q8IZH2 1706 aaKnown RBP28.02■■■□□ 2.08
MRPL55-230ENST00000489430 C14orf37Q86TY3 774 aa28.02■■■□□ 2.08
MRPL55-230ENST00000489430 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
MRPL55-230ENST00000489430 SLAIN2Q9P270 581 aa28.02■■■□□ 2.08
MRPL55-230ENST00000489430 RGL3Q3MIN7 710 aa28■■■□□ 2.07
MRPL55-230ENST00000489430 PPLO60437 1756 aa28■■■□□ 2.07
MRPL55-230ENST00000489430 DCCP43146 1447 aa27.99■■■□□ 2.07
MRPL55-230ENST00000489430 PRAG1Q86YV5 1406 aa27.99■■■□□ 2.07
MRPL55-230ENST00000489430 ATF3P18847 181 aa27.97■■■□□ 2.07
MRPL55-230ENST00000489430 DISP3Q9P2K9 1392 aa27.96■■■□□ 2.07
MRPL55-230ENST00000489430 PTCH1Q13635 1447 aa27.95■■■□□ 2.07
MRPL55-230ENST00000489430 ADGRF5Q8IZF2 1346 aa27.94■■■□□ 2.06
MRPL55-230ENST00000489430 SETD1AO15047 1707 aaKnown RBP27.91■■■□□ 2.06
MRPL55-230ENST00000489430 PIK3C2GO75747 1445 aa27.9■■■□□ 2.06
MRPL55-230ENST00000489430 ROBO1Q9Y6N7 1651 aa27.89■■■□□ 2.06
MRPL55-230ENST00000489430 ADGRL3Q9HAR2 1447 aa27.89■■■□□ 2.06
MRPL55-230ENST00000489430 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.89■■■□□ 2.05
MRPL55-230ENST00000489430 STAC3Q96MF2 364 aa27.88■■■□□ 2.05
MRPL55-230ENST00000489430 IFT172Q9UG01 1749 aa27.88■■■□□ 2.05
MRPL55-230ENST00000489430 MYOM2P54296 1465 aa27.87■■■□□ 2.05
MRPL55-230ENST00000489430 NRXN1Q9ULB1 1477 aa27.86■■■□□ 2.05
MRPL55-230ENST00000489430 ROBO2Q9HCK4 1378 aa27.86■■■□□ 2.05
MRPL55-230ENST00000489430 C14orf93Q9H972 538 aaKnown RBP27.83■■■□□ 2.05
MRPL55-230ENST00000489430 TECPR2O15040 1411 aa27.83■■■□□ 2.05
MRPL55-230ENST00000489430 LRPPRCP42704 1394 aaKnown RBP27.82■■■□□ 2.04
MRPL55-230ENST00000489430 ABCC11Q96J66 1382 aa27.82■■■□□ 2.04
MRPL55-230ENST00000489430 MED1Q15648 1581 aaPredicted RBP27.79■■■□□ 2.04
MRPL55-230ENST00000489430 MST1RQ04912 1400 aa27.79■■■□□ 2.04
MRPL55-230ENST00000489430 BRINP3Q76B58 766 aa27.78■■■□□ 2.04
MRPL55-230ENST00000489430 SIRT1Q96EB6 747 aa27.78■■■□□ 2.04
MRPL55-230ENST00000489430 AHDC1Q5TGY3 1603 aaPredicted RBP27.74■■■□□ 2.03
MRPL55-230ENST00000489430 YTHDC2Q9H6S0 1430 aaKnown RBP27.74■■■□□ 2.03
MRPL55-230ENST00000489430 LAMC1P11047 1609 aa27.74■■■□□ 2.03
MRPL55-230ENST00000489430 JCADQ9P266 1359 aa27.73■■■□□ 2.03
MRPL55-230ENST00000489430 TMEM132EQ6IEE7 984 aa27.73■■■□□ 2.03
MRPL55-230ENST00000489430 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
MRPL55-230ENST00000489430 NALCNQ8IZF0 1738 aa27.72■■■□□ 2.03
MRPL55-230ENST00000489430 ASXL1Q8IXJ9 1541 aa27.72■■■□□ 2.03
MRPL55-230ENST00000489430 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
MRPL55-230ENST00000489430 DCAF11Q8TEB1 546 aa27.71■■■□□ 2.03
MRPL55-230ENST00000489430 STK26Q9P289 416 aa27.71■■■□□ 2.03
MRPL55-230ENST00000489430 PHLPP1O60346 1717 aa27.7■■■□□ 2.03
MRPL55-230ENST00000489430 C1orf167Q5SNV9 1468 aa27.69■■■□□ 2.02
MRPL55-230ENST00000489430 COL16A1Q07092 1604 aaPredicted RBP27.68■■■□□ 2.02
MRPL55-230ENST00000489430 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
MRPL55-230ENST00000489430 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
MRPL55-230ENST00000489430 ILDR2Q71H61 639 aa27.66■■■□□ 2.02
MRPL55-230ENST00000489430 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
MRPL55-230ENST00000489430 WAPLQ7Z5K2 1190 aa27.65■■■□□ 2.02
MRPL55-230ENST00000489430 KDM2AQ9Y2K7 1162 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms