RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RIMS2Q9UQ26 1411 aa22.24■■□□□ 1.15
FDPS-213ENST00000489003 MED14O60244 1454 aa22.24■■□□□ 1.15
FDPS-213ENST00000489003 NPHP4O75161 1426 aaPredicted RBP22.23■■□□□ 1.15
FDPS-213ENST00000489003 ZFYVE9O95405 1425 aa22.23■■□□□ 1.15
FDPS-213ENST00000489003 SCAF11Q99590 1463 aaKnown RBP22.23■■□□□ 1.15
FDPS-213ENST00000489003 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
FDPS-213ENST00000489003 RGL3Q3MIN7 710 aa22.2■■□□□ 1.14
FDPS-213ENST00000489003 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
FDPS-213ENST00000489003 SPATA31E1Q6ZUB1 1445 aa22.18■■□□□ 1.14
FDPS-213ENST00000489003 RPGRIP1LQ68CZ1 1315 aa22.18■■□□□ 1.14
FDPS-213ENST00000489003 PPP1R15AO75807 674 aaPredicted RBP22.18■■□□□ 1.14
FDPS-213ENST00000489003 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
FDPS-213ENST00000489003 IQGAP1P46940 1657 aa22.17■■□□□ 1.14
FDPS-213ENST00000489003 BCANQ96GW7 911 aa22.16■■□□□ 1.14
FDPS-213ENST00000489003 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
FDPS-213ENST00000489003 PLEKHG1Q9ULL1 1385 aa22.13■■□□□ 1.13
FDPS-213ENST00000489003 NEXMIFQ5QGS0 1516 aa22.13■■□□□ 1.13
FDPS-213ENST00000489003 VGFO15240 615 aaPredicted RBP22.12■■□□□ 1.13
FDPS-213ENST00000489003 SIN3AQ96ST3 1273 aa22.12■■□□□ 1.13
FDPS-213ENST00000489003 ZNF335Q9H4Z2 1342 aaPredicted RBP22.11■■□□□ 1.13
FDPS-213ENST00000489003 TBX22Q9Y458 520 aa22.1■■□□□ 1.13
FDPS-213ENST00000489003 PPLO60437 1756 aa22.09■■□□□ 1.13
FDPS-213ENST00000489003 ADGRF5Q8IZF2 1346 aa22.06■■□□□ 1.12
FDPS-213ENST00000489003 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
FDPS-213ENST00000489003 LTBP4Q8N2S1 1624 aa22.05■■□□□ 1.12
FDPS-213ENST00000489003 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
FDPS-213ENST00000489003 NEUROD1Q13562 356 aa22.04■■□□□ 1.12
FDPS-213ENST00000489003 KCNA6P17658 529 aa22.02■■□□□ 1.12
FDPS-213ENST00000489003 DCAF11Q8TEB1 546 aa22.02■■□□□ 1.12
FDPS-213ENST00000489003 KDM2AQ9Y2K7 1162 aa22.02■■□□□ 1.12
FDPS-213ENST00000489003 NRXN3Q9Y4C0 1643 aa22.02■■□□□ 1.11
FDPS-213ENST00000489003 CERKQ8TCT0 537 aa22.01■■□□□ 1.11
FDPS-213ENST00000489003 STRCP1A6NGW2 1772 aa22.01■■□□□ 1.11
FDPS-213ENST00000489003 SETBP1Q9Y6X0 1596 aa22■■□□□ 1.11
FDPS-213ENST00000489003 STAC3Q96MF2 364 aa21.98■■□□□ 1.11
FDPS-213ENST00000489003 CHD2O14647 1828 aaKnown RBP21.98■■□□□ 1.11
FDPS-213ENST00000489003 L3MBTL2Q969R5 705 aa21.96■■□□□ 1.11
FDPS-213ENST00000489003 METP08581 1390 aa21.96■■□□□ 1.11
FDPS-213ENST00000489003 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
FDPS-213ENST00000489003 DIP2AQ14689 1571 aa21.95■■□□□ 1.11
FDPS-213ENST00000489003 C14orf93Q9H972 538 aaKnown RBP21.95■■□□□ 1.1
FDPS-213ENST00000489003 ALKQ9UM73 1620 aa21.95■■□□□ 1.1
FDPS-213ENST00000489003 AMOTL2Q9Y2J4 779 aa21.94■■□□□ 1.1
FDPS-213ENST00000489003 MYOM2P54296 1465 aa21.94■■□□□ 1.1
FDPS-213ENST00000489003 NRXN1Q9ULB1 1477 aa21.94■■□□□ 1.1
FDPS-213ENST00000489003 CPS1P31327 1500 aa21.93■■□□□ 1.1
FDPS-213ENST00000489003 CFAP70Q5T0N1 1121 aa21.93■■□□□ 1.1
FDPS-213ENST00000489003 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
FDPS-213ENST00000489003 PIK3C2GO75747 1445 aa21.92■■□□□ 1.1
FDPS-213ENST00000489003 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
FDPS-213ENST00000489003 SETD1AO15047 1707 aaKnown RBP21.91■■□□□ 1.1
FDPS-213ENST00000489003 TMEM132EQ6IEE7 984 aa21.9■■□□□ 1.1
FDPS-213ENST00000489003 LRRC7Q96NW7 1537 aa21.9■■□□□ 1.1
FDPS-213ENST00000489003 NWD1Q149M9 1564 aa21.88■■□□□ 1.09
FDPS-213ENST00000489003 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
FDPS-213ENST00000489003 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
FDPS-213ENST00000489003 CLSPNQ9HAW4 1339 aa21.86■■□□□ 1.09
FDPS-213ENST00000489003 XIRP1Q702N8 1843 aaKnown RBP21.84■■□□□ 1.09
FDPS-213ENST00000489003 TMEM94Q12767 1356 aa21.84■■□□□ 1.09
FDPS-213ENST00000489003 IQSEC2Q5JU85 1478 aa21.83■■□□□ 1.09
FDPS-213ENST00000489003 STK26Q9P289 416 aa21.83■■□□□ 1.09
FDPS-213ENST00000489003 NKTRP30414 1462 aaKnown RBP21.83■■□□□ 1.08
FDPS-213ENST00000489003 XRN1Q8IZH2 1706 aaKnown RBP21.81■■□□□ 1.08
FDPS-213ENST00000489003 TONSLQ96HA7 1378 aa21.81■■□□□ 1.08
FDPS-213ENST00000489003 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
FDPS-213ENST00000489003 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
FDPS-213ENST00000489003 LRPPRCP42704 1394 aaKnown RBP21.79■■□□□ 1.08
FDPS-213ENST00000489003 ABCC11Q96J66 1382 aa21.79■■□□□ 1.08
FDPS-213ENST00000489003 LAMC1P11047 1609 aa21.78■■□□□ 1.08
FDPS-213ENST00000489003 NBPF1Q3BBV0 1214 aa21.78■■□□□ 1.08
FDPS-213ENST00000489003 NBPF8Q3BBV2 869 aa21.78■■□□□ 1.08
FDPS-213ENST00000489003 YTHDC2Q9H6S0 1430 aaKnown RBP21.78■■□□□ 1.08
FDPS-213ENST00000489003 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
FDPS-213ENST00000489003 UBAP1LF5GYI3 381 aa21.76■■□□□ 1.07
FDPS-213ENST00000489003 FBXO41Q8TF61 875 aa21.76■■□□□ 1.07
FDPS-213ENST00000489003 SIRT1Q96EB6 747 aa21.76■■□□□ 1.07
FDPS-213ENST00000489003 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
FDPS-213ENST00000489003 ADGRB1O14514 1584 aa21.75■■□□□ 1.07
FDPS-213ENST00000489003 WAPLQ7Z5K2 1190 aa21.75■■□□□ 1.07
FDPS-213ENST00000489003 C14orf37Q86TY3 774 aa21.74■■□□□ 1.07
FDPS-213ENST00000489003 C19orf44Q9H6X5 657 aa21.74■■□□□ 1.07
FDPS-213ENST00000489003 TIMELESSQ9UNS1 1208 aa21.74■■□□□ 1.07
FDPS-213ENST00000489003 KIAA1210Q9ULL0 1709 aa21.74■■□□□ 1.07
FDPS-213ENST00000489003 TECPR2O15040 1411 aa21.73■■□□□ 1.07
FDPS-213ENST00000489003 TOM1O60784 492 aa21.73■■□□□ 1.07
FDPS-213ENST00000489003 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
FDPS-213ENST00000489003 TRAK1Q9UPV9 953 aa21.72■■□□□ 1.07
FDPS-213ENST00000489003 MSH6P52701 1360 aa21.71■■□□□ 1.07
FDPS-213ENST00000489003 KNDC1Q76NI1 1749 aa21.69■■□□□ 1.06
FDPS-213ENST00000489003 PLEKHH1Q9ULM0 1364 aa21.69■■□□□ 1.06
FDPS-213ENST00000489003 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.67■■□□□ 1.06
FDPS-213ENST00000489003 ILDR1Q86SU0 546 aaPredicted RBP21.67■■□□□ 1.06
FDPS-213ENST00000489003 PRAM1Q96QH2 718 aa21.67■■□□□ 1.06
FDPS-213ENST00000489003 TRPM1Q7Z4N2 1603 aa21.66■■□□□ 1.06
FDPS-213ENST00000489003 FAM135BQ49AJ0 1406 aa21.66■■□□□ 1.06
FDPS-213ENST00000489003 POGKQ9P215 609 aa21.66■■□□□ 1.06
FDPS-213ENST00000489003 ATF3P18847 181 aa21.65■■□□□ 1.06
FDPS-213ENST00000489003 PIP4K2BP78356 416 aa21.65■■□□□ 1.06
FDPS-213ENST00000489003 CADPS2Q86UW7 1296 aa21.65■■□□□ 1.06
FDPS-213ENST00000489003 DLC1Q96QB1 1528 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms