RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.24
ARHGEF39-204ENST00000488918 IQSEC2Q5JU85 1478 aa16.58■□□□□ 0.24
ARHGEF39-204ENST00000488918 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
ARHGEF39-204ENST00000488918 SETD5Q9C0A6 1442 aa16.57■□□□□ 0.24
ARHGEF39-204ENST00000488918 TOM1O60784 492 aa16.57■□□□□ 0.24
ARHGEF39-204ENST00000488918 NUTM2DQ5VT03 806 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF39-204ENST00000488918 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
ARHGEF39-204ENST00000488918 PLEKHG1Q9ULL1 1385 aa16.52■□□□□ 0.24
ARHGEF39-204ENST00000488918 KCNA6P17658 529 aa16.51■□□□□ 0.23
ARHGEF39-204ENST00000488918 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
ARHGEF39-204ENST00000488918 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF39-204ENST00000488918 TMEM131LA2VDJ0 1609 aa16.51■□□□□ 0.23
ARHGEF39-204ENST00000488918 SPHKAPQ2M3C7 1700 aa16.5■□□□□ 0.23
ARHGEF39-204ENST00000488918 FOXD1Q16676 465 aa16.5■□□□□ 0.23
ARHGEF39-204ENST00000488918 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
ARHGEF39-204ENST00000488918 CCDC144AA2RUR9 1427 aa16.49■□□□□ 0.23
ARHGEF39-204ENST00000488918 VGFO15240 615 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF39-204ENST00000488918 TRPM2O94759 1503 aa16.49■□□□□ 0.23
ARHGEF39-204ENST00000488918 RAB3GAP2Q9H2M9 1393 aa16.49■□□□□ 0.23
ARHGEF39-204ENST00000488918 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
ARHGEF39-204ENST00000488918 TBX22Q9Y458 520 aa16.48■□□□□ 0.23
ARHGEF39-204ENST00000488918 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
ARHGEF39-204ENST00000488918 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
ARHGEF39-204ENST00000488918 LRRC7Q96NW7 1537 aa16.43■□□□□ 0.22
ARHGEF39-204ENST00000488918 MYO5BQ9ULV0 1848 aa16.42■□□□□ 0.22
ARHGEF39-204ENST00000488918 CLTCL1P53675 1640 aa16.42■□□□□ 0.22
ARHGEF39-204ENST00000488918 HRCP23327 699 aa16.42■□□□□ 0.22
ARHGEF39-204ENST00000488918 MSH6P52701 1360 aa16.41■□□□□ 0.22
ARHGEF39-204ENST00000488918 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
ARHGEF39-204ENST00000488918 KIF1BO60333 1816 aa16.41■□□□□ 0.22
ARHGEF39-204ENST00000488918 PIK3R4Q99570 1358 aa16.4■□□□□ 0.22
ARHGEF39-204ENST00000488918 DIP2AQ14689 1571 aa16.39■□□□□ 0.21
ARHGEF39-204ENST00000488918 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
ARHGEF39-204ENST00000488918 NKTRP30414 1462 aaKnown RBP16.39■□□□□ 0.21
ARHGEF39-204ENST00000488918 RBM33Q96EV2 1170 aaKnown RBP16.38■□□□□ 0.21
ARHGEF39-204ENST00000488918 ATF3P18847 181 aa16.37■□□□□ 0.21
ARHGEF39-204ENST00000488918 ANKRD30BQ9BXX2 1392 aa16.36■□□□□ 0.21
ARHGEF39-204ENST00000488918 ADAMTS13Q76LX8 1427 aa16.35■□□□□ 0.21
ARHGEF39-204ENST00000488918 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.21
ARHGEF39-204ENST00000488918 NEXMIFQ5QGS0 1516 aa16.33■□□□□ 0.2
ARHGEF39-204ENST00000488918 HSPA1LP34931 641 aa16.32■□□□□ 0.2
ARHGEF39-204ENST00000488918 NWD1Q149M9 1564 aa16.32■□□□□ 0.2
ARHGEF39-204ENST00000488918 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
ARHGEF39-204ENST00000488918 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
ARHGEF39-204ENST00000488918 NCOA3Q9Y6Q9 1424 aa16.32■□□□□ 0.2
ARHGEF39-204ENST00000488918 SETBP1Q9Y6X0 1596 aa16.32■□□□□ 0.2
ARHGEF39-204ENST00000488918 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
ARHGEF39-204ENST00000488918 METP08581 1390 aa16.29■□□□□ 0.2
ARHGEF39-204ENST00000488918 CHD2O14647 1828 aaKnown RBP16.28■□□□□ 0.2
ARHGEF39-204ENST00000488918 ADGRF5Q8IZF2 1346 aa16.27■□□□□ 0.2
ARHGEF39-204ENST00000488918 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF39-204ENST00000488918 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
ARHGEF39-204ENST00000488918 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.19
ARHGEF39-204ENST00000488918 STK26Q9P289 416 aa16.26■□□□□ 0.19
ARHGEF39-204ENST00000488918 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
ARHGEF39-204ENST00000488918 DCAF11Q8TEB1 546 aa16.25■□□□□ 0.19
ARHGEF39-204ENST00000488918 STAC3Q96MF2 364 aa16.25■□□□□ 0.19
ARHGEF39-204ENST00000488918 PTPRUQ92729 1446 aa16.25■□□□□ 0.19
ARHGEF39-204ENST00000488918 FAM135BQ49AJ0 1406 aa16.24■□□□□ 0.19
ARHGEF39-204ENST00000488918 ALKQ9UM73 1620 aa16.23■□□□□ 0.19
ARHGEF39-204ENST00000488918 PPLO60437 1756 aa16.23■□□□□ 0.19
ARHGEF39-204ENST00000488918 NRXN3Q9Y4C0 1643 aa16.23■□□□□ 0.19
ARHGEF39-204ENST00000488918 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF39-204ENST00000488918 TMEM132EQ6IEE7 984 aa16.21■□□□□ 0.19
ARHGEF39-204ENST00000488918 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
ARHGEF39-204ENST00000488918 C14orf93Q9H972 538 aaKnown RBP16.19■□□□□ 0.18
ARHGEF39-204ENST00000488918 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
ARHGEF39-204ENST00000488918 DCCP43146 1447 aa16.19■□□□□ 0.18
ARHGEF39-204ENST00000488918 PTCH1Q13635 1447 aa16.19■□□□□ 0.18
ARHGEF39-204ENST00000488918 CFAP70Q5T0N1 1121 aa16.18■□□□□ 0.18
ARHGEF39-204ENST00000488918 POGKQ9P215 609 aa16.18■□□□□ 0.18
ARHGEF39-204ENST00000488918 PIK3C2GO75747 1445 aa16.18■□□□□ 0.18
ARHGEF39-204ENST00000488918 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
ARHGEF39-204ENST00000488918 MYOM2P54296 1465 aa16.17■□□□□ 0.18
ARHGEF39-204ENST00000488918 XRN1Q8IZH2 1706 aaKnown RBP16.17■□□□□ 0.18
ARHGEF39-204ENST00000488918 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
ARHGEF39-204ENST00000488918 ROBO2Q9HCK4 1378 aa16.16■□□□□ 0.18
ARHGEF39-204ENST00000488918 ROBO1Q9Y6N7 1651 aa16.15■□□□□ 0.18
ARHGEF39-204ENST00000488918 NEUROD1Q13562 356 aa16.15■□□□□ 0.18
ARHGEF39-204ENST00000488918 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF39-204ENST00000488918 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
ARHGEF39-204ENST00000488918 YTHDC2Q9H6S0 1430 aaKnown RBP16.13■□□□□ 0.17
ARHGEF39-204ENST00000488918 WAPLQ7Z5K2 1190 aa16.13■□□□□ 0.17
ARHGEF39-204ENST00000488918 BRINP3Q76B58 766 aa16.12■□□□□ 0.17
ARHGEF39-204ENST00000488918 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
ARHGEF39-204ENST00000488918 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
ARHGEF39-204ENST00000488918 MEX3CQ5U5Q3 659 aaKnown RBP16.11■□□□□ 0.17
ARHGEF39-204ENST00000488918 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
ARHGEF39-204ENST00000488918 LAMC1P11047 1609 aa16.11■□□□□ 0.17
ARHGEF39-204ENST00000488918 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
ARHGEF39-204ENST00000488918 SIRT1Q96EB6 747 aa16.1■□□□□ 0.17
ARHGEF39-204ENST00000488918 PRAM1Q96QH2 718 aa16.1■□□□□ 0.17
ARHGEF39-204ENST00000488918 JCADQ9P266 1359 aa16.1■□□□□ 0.17
ARHGEF39-204ENST00000488918 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
ARHGEF39-204ENST00000488918 MST1RQ04912 1400 aa16.09■□□□□ 0.17
ARHGEF39-204ENST00000488918 PRAG1Q86YV5 1406 aa16.09■□□□□ 0.17
ARHGEF39-204ENST00000488918 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
ARHGEF39-204ENST00000488918 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.16
ARHGEF39-204ENST00000488918 TECPR2O15040 1411 aa16.08■□□□□ 0.16
ARHGEF39-204ENST00000488918 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms