RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 TMEM94Q12767 1356 aa39.81■■■■□ 3.96
RNF220-216ENST00000488865 E9PCH4 1651 aa39.8■■■■□ 3.96
RNF220-216ENST00000488865 MYO5BQ9ULV0 1848 aa39.8■■■■□ 3.96
RNF220-216ENST00000488865 BCANQ96GW7 911 aa39.78■■■■□ 3.96
RNF220-216ENST00000488865 PLEKHG1Q9ULL1 1385 aa39.78■■■■□ 3.96
RNF220-216ENST00000488865 RIMS2Q9UQ26 1411 aa39.78■■■■□ 3.96
RNF220-216ENST00000488865 ITGAEP38570 1179 aa39.77■■■■□ 3.96
RNF220-216ENST00000488865 NWD1Q149M9 1564 aa39.76■■■■□ 3.96
RNF220-216ENST00000488865 NKTRP30414 1462 aaKnown RBP39.76■■■■□ 3.96
RNF220-216ENST00000488865 PROSER2Q86WR7 435 aaPredicted RBP39.76■■■■□ 3.96
RNF220-216ENST00000488865 PPARGC1BQ86YN6 1023 aaKnown RBP39.75■■■■□ 3.95
RNF220-216ENST00000488865 NUP155O75694 1391 aa39.74■■■■□ 3.95
RNF220-216ENST00000488865 SENP3Q9H4L4 574 aaPredicted RBP39.73■■■■□ 3.95
RNF220-216ENST00000488865 PPP1R15AO75807 674 aaPredicted RBP39.72■■■■□ 3.95
RNF220-216ENST00000488865 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.71■■■■□ 3.95
RNF220-216ENST00000488865 FAM135BQ49AJ0 1406 aa39.71■■■■□ 3.95
RNF220-216ENST00000488865 CHGAP10645 457 aaKnown RBP39.68■■■■□ 3.94
RNF220-216ENST00000488865 TBX22Q9Y458 520 aa39.65■■■■□ 3.94
RNF220-216ENST00000488865 CHD2O14647 1828 aaKnown RBP39.64■■■■□ 3.94
RNF220-216ENST00000488865 RBM33Q96EV2 1170 aaKnown RBP39.64■■■■□ 3.94
RNF220-216ENST00000488865 PHF23Q9BUL5 403 aaPredicted RBP39.62■■■■□ 3.93
RNF220-216ENST00000488865 MSH6P52701 1360 aa39.59■■■■□ 3.93
RNF220-216ENST00000488865 RRBP1Q9P2E9 1410 aaKnown RBP39.56■■■■□ 3.92
RNF220-216ENST00000488865 ADAMTS13Q76LX8 1427 aa39.55■■■■□ 3.92
RNF220-216ENST00000488865 DIP2AQ14689 1571 aa39.55■■■■□ 3.92
RNF220-216ENST00000488865 ROBO1Q9Y6N7 1651 aa39.54■■■■□ 3.92
RNF220-216ENST00000488865 NUTM2DQ5VT03 806 aaPredicted RBP39.53■■■■□ 3.92
RNF220-216ENST00000488865 PIK3R4Q99570 1358 aa39.51■■■■□ 3.92
RNF220-216ENST00000488865 NCOA3Q9Y6Q9 1424 aa39.5■■■■□ 3.91
RNF220-216ENST00000488865 SPHKAPQ2M3C7 1700 aa39.48■■■■□ 3.91
RNF220-216ENST00000488865 SLAIN2Q9P270 581 aa39.47■■■■□ 3.91
RNF220-216ENST00000488865 NAIPQ13075 1403 aa39.41■■■■□ 3.9
RNF220-216ENST00000488865 TRPM2O94759 1503 aa39.41■■■■□ 3.9
RNF220-216ENST00000488865 C14orf37Q86TY3 774 aa39.36■■■■□ 3.89
RNF220-216ENST00000488865 C19orf44Q9H6X5 657 aa39.34■■■■□ 3.89
RNF220-216ENST00000488865 AMOTL2Q9Y2J4 779 aa39.34■■■■□ 3.89
RNF220-216ENST00000488865 ZNF326Q5BKZ1 582 aaKnown RBP39.33■■■■□ 3.89
RNF220-216ENST00000488865 SETBP1Q9Y6X0 1596 aa39.33■■■■□ 3.89
RNF220-216ENST00000488865 RGS17Q9UGC6 210 aaPredicted RBP39.32■■■■□ 3.89
RNF220-216ENST00000488865 PTPRUQ92729 1446 aa39.31■■■■□ 3.88
RNF220-216ENST00000488865 CADPS2Q86UW7 1296 aa39.31■■■■□ 3.88
RNF220-216ENST00000488865 NRXN3Q9Y4C0 1643 aa39.3■■■■□ 3.88
RNF220-216ENST00000488865 PHLPP1O60346 1717 aa39.3■■■■□ 3.88
RNF220-216ENST00000488865 SIPA1L2Q9P2F8 1722 aaPredicted RBP39.29■■■■□ 3.88
RNF220-216ENST00000488865 CLTCL1P53675 1640 aa39.29■■■■□ 3.88
RNF220-216ENST00000488865 HFM1A2PYH4 1435 aa39.27■■■■□ 3.88
RNF220-216ENST00000488865 ATF3P18847 181 aa39.27■■■■□ 3.88
RNF220-216ENST00000488865 JCADQ9P266 1359 aa39.23■■■■□ 3.87
RNF220-216ENST00000488865 XRN1Q8IZH2 1706 aaKnown RBP39.23■■■■□ 3.87
RNF220-216ENST00000488865 NEXMIFQ5QGS0 1516 aa39.22■■■■□ 3.87
RNF220-216ENST00000488865 KIF1BO60333 1816 aa39.2■■■■□ 3.87
RNF220-216ENST00000488865 TRIM52Q96A61 297 aa39.2■■■■□ 3.87
RNF220-216ENST00000488865 COL16A1Q07092 1604 aaPredicted RBP39.19■■■■□ 3.86
RNF220-216ENST00000488865 METP08581 1390 aa39.18■■■■□ 3.86
RNF220-216ENST00000488865 DCCP43146 1447 aa39.17■■■■□ 3.86
RNF220-216ENST00000488865 AHDC1Q5TGY3 1603 aaPredicted RBP39.14■■■■□ 3.86
RNF220-216ENST00000488865 SLC4A1APQ9BWU0 796 aaKnown RBP39.12■■■■□ 3.85
RNF220-216ENST00000488865 POTEAQ6S8J7 498 aa39.09■■■■□ 3.85
RNF220-216ENST00000488865 VGFO15240 615 aaPredicted RBP39.08■■■■□ 3.85
RNF220-216ENST00000488865 BRINP3Q76B58 766 aa39.07■■■■□ 3.85
RNF220-216ENST00000488865 SPATA31A6Q5VVP1 1343 aa39.06■■■■□ 3.84
RNF220-216ENST00000488865 RPGRIP1LQ68CZ1 1315 aa39.04■■■■□ 3.84
RNF220-216ENST00000488865 MST1RQ04912 1400 aa39.01■■■■□ 3.84
RNF220-216ENST00000488865 ADGRL3Q9HAR2 1447 aa39.01■■■■□ 3.84
RNF220-216ENST00000488865 SHPRHQ149N8 1683 aa39■■■■□ 3.83
RNF220-216ENST00000488865 ASXL1Q8IXJ9 1541 aa38.98■■■■□ 3.83
RNF220-216ENST00000488865 SETD1AO15047 1707 aaKnown RBP38.95■■■■□ 3.83
RNF220-216ENST00000488865 LRP6O75581 1613 aa38.95■■■■□ 3.83
RNF220-216ENST00000488865 PTCH1Q13635 1447 aa38.93■■■■□ 3.82
RNF220-216ENST00000488865 NALCNQ8IZF0 1738 aa38.93■■■■□ 3.82
RNF220-216ENST00000488865 PPLO60437 1756 aa38.92■■■■□ 3.82
RNF220-216ENST00000488865 NHSL1Q5SYE7 1610 aa38.9■■■■□ 3.82
RNF220-216ENST00000488865 PRAG1Q86YV5 1406 aa38.89■■■■□ 3.82
RNF220-216ENST00000488865 SETD5Q9C0A6 1442 aa38.89■■■■□ 3.82
RNF220-216ENST00000488865 MEX3CQ5U5Q3 659 aaKnown RBP38.89■■■■□ 3.82
RNF220-216ENST00000488865 FOXD1Q16676 465 aa38.88■■■■□ 3.81
RNF220-216ENST00000488865 ROBO2Q9HCK4 1378 aa38.86■■■■□ 3.81
RNF220-216ENST00000488865 CCDC144AA2RUR9 1427 aa38.84■■■■□ 3.81
RNF220-216ENST00000488865 ZNF772Q68DY9 489 aaPredicted RBP38.83■■■■□ 3.81
RNF220-216ENST00000488865 LRRC59Q96AG4 307 aaKnown RBP38.83■■■■□ 3.81
RNF220-216ENST00000488865 MPHOSPH9Q99550 1183 aa38.83■■■■□ 3.81
RNF220-216ENST00000488865 C1orf167Q5SNV9 1468 aa38.79■■■■□ 3.8
RNF220-216ENST00000488865 SPATA31E1Q6ZUB1 1445 aa38.77■■■■□ 3.8
RNF220-216ENST00000488865 NUTM2BA6NNL0 878 aaPredicted RBP38.76■■■■□ 3.8
RNF220-216ENST00000488865 NUTM2EB1AL46 878 aaPredicted RBP38.76■■■■□ 3.8
RNF220-216ENST00000488865 NUTM2AQ8IVF1 878 aaPredicted RBP38.76■■■■□ 3.8
RNF220-216ENST00000488865 ACIN1Q9UKV3 1341 aaKnown RBP38.76■■■■□ 3.8
RNF220-216ENST00000488865 DDX17Q92841 729 aaKnown RBP38.74■■■■□ 3.79
RNF220-216ENST00000488865 ADGRF5Q8IZF2 1346 aa38.73■■■■□ 3.79
RNF220-216ENST00000488865 ANKRD30BQ9BXX2 1392 aa38.72■■■■□ 3.79
RNF220-216ENST00000488865 RGL3Q3MIN7 710 aa38.72■■■■□ 3.79
RNF220-216ENST00000488865 LAMC1P11047 1609 aa38.71■■■■□ 3.79
RNF220-216ENST00000488865 PNPLA6Q8IY17 1366 aa38.7■■■■□ 3.78
RNF220-216ENST00000488865 IFT172Q9UG01 1749 aa38.68■■■■□ 3.78
RNF220-216ENST00000488865 ORAI2Q96SN7 254 aa38.66■■■■□ 3.78
RNF220-216ENST00000488865 SOS2Q07890 1332 aaPredicted RBP38.63■■■■□ 3.78
RNF220-216ENST00000488865 TECPR2O15040 1411 aa38.62■■■■□ 3.77
RNF220-216ENST00000488865 AFF2P51816 1311 aa38.62■■■■□ 3.77
RNF220-216ENST00000488865 CDC42BPGQ6DT37 1551 aa38.61■■■■□ 3.77
RNF220-216ENST00000488865 LRPPRCP42704 1394 aaKnown RBP38.6■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms