RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-215ENST00000488592 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
SCMH1-215ENST00000488592 KCNA6P17658 529 aa19.19■□□□□ 0.66
SCMH1-215ENST00000488592 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
SCMH1-215ENST00000488592 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
SCMH1-215ENST00000488592 CHD2O14647 1828 aaKnown RBP19.18■□□□□ 0.66
SCMH1-215ENST00000488592 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
SCMH1-215ENST00000488592 NUP155O75694 1391 aa19.17■□□□□ 0.66
SCMH1-215ENST00000488592 SPHKAPQ2M3C7 1700 aa19.17■□□□□ 0.66
SCMH1-215ENST00000488592 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.16■□□□□ 0.66
SCMH1-215ENST00000488592 SOCS7O14512 581 aa19.14■□□□□ 0.65
SCMH1-215ENST00000488592 ILDR2Q71H61 639 aa19.14■□□□□ 0.65
SCMH1-215ENST00000488592 TMEM94Q12767 1356 aa19.14■□□□□ 0.65
SCMH1-215ENST00000488592 PIK3R4Q99570 1358 aa19.14■□□□□ 0.65
SCMH1-215ENST00000488592 FAM135BQ49AJ0 1406 aa19.14■□□□□ 0.65
SCMH1-215ENST00000488592 NCOA3Q9Y6Q9 1424 aa19.14■□□□□ 0.65
SCMH1-215ENST00000488592 TBX22Q9Y458 520 aa19.11■□□□□ 0.65
SCMH1-215ENST00000488592 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
SCMH1-215ENST00000488592 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
SCMH1-215ENST00000488592 NAIPQ13075 1403 aa19.08■□□□□ 0.64
SCMH1-215ENST00000488592 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.64
SCMH1-215ENST00000488592 MSH6P52701 1360 aa19.07■□□□□ 0.64
SCMH1-215ENST00000488592 TRPM2O94759 1503 aa19.07■□□□□ 0.64
SCMH1-215ENST00000488592 PROSER2Q86WR7 435 aaPredicted RBP19.07■□□□□ 0.64
SCMH1-215ENST00000488592 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
SCMH1-215ENST00000488592 ROBO1Q9Y6N7 1651 aa19.06■□□□□ 0.64
SCMH1-215ENST00000488592 HFM1A2PYH4 1435 aa19.06■□□□□ 0.64
SCMH1-215ENST00000488592 ITGAEP38570 1179 aa19.05■□□□□ 0.64
SCMH1-215ENST00000488592 BCANQ96GW7 911 aa19.04■□□□□ 0.64
SCMH1-215ENST00000488592 KIF1BO60333 1816 aa19.04■□□□□ 0.64
SCMH1-215ENST00000488592 NRXN3Q9Y4C0 1643 aa19.02■□□□□ 0.64
SCMH1-215ENST00000488592 CLTCL1P53675 1640 aa19.01■□□□□ 0.63
SCMH1-215ENST00000488592 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
SCMH1-215ENST00000488592 XRN1Q8IZH2 1706 aaKnown RBP19■□□□□ 0.63
SCMH1-215ENST00000488592 PPARGC1BQ86YN6 1023 aaKnown RBP18.98■□□□□ 0.63
SCMH1-215ENST00000488592 NEXMIFQ5QGS0 1516 aa18.98■□□□□ 0.63
SCMH1-215ENST00000488592 DCCP43146 1447 aa18.98■□□□□ 0.63
SCMH1-215ENST00000488592 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
SCMH1-215ENST00000488592 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
SCMH1-215ENST00000488592 PHLPP1O60346 1717 aa18.95■□□□□ 0.62
SCMH1-215ENST00000488592 SLAIN2Q9P270 581 aa18.95■□□□□ 0.62
SCMH1-215ENST00000488592 CADPS2Q86UW7 1296 aa18.94■□□□□ 0.62
SCMH1-215ENST00000488592 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
SCMH1-215ENST00000488592 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
SCMH1-215ENST00000488592 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
SCMH1-215ENST00000488592 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
SCMH1-215ENST00000488592 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
SCMH1-215ENST00000488592 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
SCMH1-215ENST00000488592 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
SCMH1-215ENST00000488592 SETD1AO15047 1707 aaKnown RBP18.89■□□□□ 0.61
SCMH1-215ENST00000488592 ZNF326Q5BKZ1 582 aaKnown RBP18.89■□□□□ 0.61
SCMH1-215ENST00000488592 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
SCMH1-215ENST00000488592 RBM33Q96EV2 1170 aaKnown RBP18.89■□□□□ 0.61
SCMH1-215ENST00000488592 RPGRIP1LQ68CZ1 1315 aa18.89■□□□□ 0.61
SCMH1-215ENST00000488592 JCADQ9P266 1359 aa18.89■□□□□ 0.61
SCMH1-215ENST00000488592 PPLO60437 1756 aa18.88■□□□□ 0.61
SCMH1-215ENST00000488592 ATF3P18847 181 aa18.88■□□□□ 0.61
SCMH1-215ENST00000488592 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
SCMH1-215ENST00000488592 SHPRHQ149N8 1683 aa18.86■□□□□ 0.61
SCMH1-215ENST00000488592 PTCH1Q13635 1447 aa18.86■□□□□ 0.61
SCMH1-215ENST00000488592 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
SCMH1-215ENST00000488592 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
SCMH1-215ENST00000488592 ADGRL3Q9HAR2 1447 aa18.84■□□□□ 0.61
SCMH1-215ENST00000488592 METP08581 1390 aa18.84■□□□□ 0.61
SCMH1-215ENST00000488592 TRIM52Q96A61 297 aa18.84■□□□□ 0.61
SCMH1-215ENST00000488592 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
SCMH1-215ENST00000488592 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.6
SCMH1-215ENST00000488592 NHSL1Q5SYE7 1610 aa18.82■□□□□ 0.6
SCMH1-215ENST00000488592 SPATA31A6Q5VVP1 1343 aa18.81■□□□□ 0.6
SCMH1-215ENST00000488592 MST1RQ04912 1400 aa18.81■□□□□ 0.6
SCMH1-215ENST00000488592 ASXL1Q8IXJ9 1541 aa18.8■□□□□ 0.6
SCMH1-215ENST00000488592 RGS17Q9UGC6 210 aaPredicted RBP18.8■□□□□ 0.6
SCMH1-215ENST00000488592 IFT172Q9UG01 1749 aa18.8■□□□□ 0.6
SCMH1-215ENST00000488592 LAMC1P11047 1609 aa18.79■□□□□ 0.6
SCMH1-215ENST00000488592 CCDC144AA2RUR9 1427 aa18.79■□□□□ 0.6
SCMH1-215ENST00000488592 BRINP3Q76B58 766 aa18.77■□□□□ 0.6
SCMH1-215ENST00000488592 SPATA31E1Q6ZUB1 1445 aa18.76■□□□□ 0.59
SCMH1-215ENST00000488592 SETD5Q9C0A6 1442 aa18.76■□□□□ 0.59
SCMH1-215ENST00000488592 ANKRD30BQ9BXX2 1392 aa18.76■□□□□ 0.59
SCMH1-215ENST00000488592 KNDC1Q76NI1 1749 aa18.73■□□□□ 0.59
SCMH1-215ENST00000488592 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
SCMH1-215ENST00000488592 TECPR2O15040 1411 aa18.72■□□□□ 0.59
SCMH1-215ENST00000488592 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
SCMH1-215ENST00000488592 LRP6O75581 1613 aa18.71■□□□□ 0.59
SCMH1-215ENST00000488592 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
SCMH1-215ENST00000488592 C1orf167Q5SNV9 1468 aa18.7■□□□□ 0.58
SCMH1-215ENST00000488592 PIK3C2GO75747 1445 aa18.68■□□□□ 0.58
SCMH1-215ENST00000488592 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
SCMH1-215ENST00000488592 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
SCMH1-215ENST00000488592 ZNF772Q68DY9 489 aaPredicted RBP18.66■□□□□ 0.58
SCMH1-215ENST00000488592 MYOM2P54296 1465 aa18.65■□□□□ 0.58
SCMH1-215ENST00000488592 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
SCMH1-215ENST00000488592 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
SCMH1-215ENST00000488592 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
SCMH1-215ENST00000488592 FOXD1Q16676 465 aa18.63■□□□□ 0.57
SCMH1-215ENST00000488592 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
SCMH1-215ENST00000488592 MEX3CQ5U5Q3 659 aaKnown RBP18.62■□□□□ 0.57
SCMH1-215ENST00000488592 PNPLA6Q8IY17 1366 aa18.62■□□□□ 0.57
SCMH1-215ENST00000488592 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
SCMH1-215ENST00000488592 COL22A1Q8NFW1 1626 aaPredicted RBP18.61■□□□□ 0.57
SCMH1-215ENST00000488592 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms