RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 HSPA1LP34931 641 aa29.42■■■□□ 2.3
CD55-209ENST00000488171 RIMS2Q9UQ26 1411 aa29.42■■■□□ 2.3
CD55-209ENST00000488171 PLEKHG1Q9ULL1 1385 aa29.38■■■□□ 2.29
CD55-209ENST00000488171 NAIPQ13075 1403 aa29.38■■■□□ 2.29
CD55-209ENST00000488171 KCNA6P17658 529 aa29.38■■■□□ 2.29
CD55-209ENST00000488171 NWD1Q149M9 1564 aa29.36■■■□□ 2.29
CD55-209ENST00000488171 CHGAP10645 457 aaKnown RBP29.36■■■□□ 2.29
CD55-209ENST00000488171 HDGFP51858 240 aaKnown RBP29.34■■■□□ 2.29
CD55-209ENST00000488171 BCANQ96GW7 911 aa29.34■■■□□ 2.29
CD55-209ENST00000488171 SENP3Q9H4L4 574 aaPredicted RBP29.34■■■□□ 2.29
CD55-209ENST00000488171 SPHKAPQ2M3C7 1700 aa29.33■■■□□ 2.29
CD55-209ENST00000488171 PPP1R15AO75807 674 aaPredicted RBP29.32■■■□□ 2.28
CD55-209ENST00000488171 TMEM94Q12767 1356 aa29.32■■■□□ 2.28
CD55-209ENST00000488171 ILDR2Q71H61 639 aa29.32■■■□□ 2.28
CD55-209ENST00000488171 NKTRP30414 1462 aaKnown RBP29.3■■■□□ 2.28
CD55-209ENST00000488171 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.3■■■□□ 2.28
CD55-209ENST00000488171 CHD2O14647 1828 aaKnown RBP29.28■■■□□ 2.28
CD55-209ENST00000488171 NUTM2DQ5VT03 806 aaPredicted RBP29.27■■■□□ 2.28
CD55-209ENST00000488171 PROSER2Q86WR7 435 aaPredicted RBP29.27■■■□□ 2.28
CD55-209ENST00000488171 HFM1A2PYH4 1435 aa29.27■■■□□ 2.28
CD55-209ENST00000488171 RBM33Q96EV2 1170 aaKnown RBP29.26■■■□□ 2.27
CD55-209ENST00000488171 ADAMTS13Q76LX8 1427 aa29.25■■■□□ 2.27
CD55-209ENST00000488171 TBX22Q9Y458 520 aa29.25■■■□□ 2.27
CD55-209ENST00000488171 DIP2AQ14689 1571 aa29.22■■■□□ 2.27
CD55-209ENST00000488171 MED1Q15648 1581 aaPredicted RBP29.22■■■□□ 2.27
CD55-209ENST00000488171 CLTCL1P53675 1640 aa29.2■■■□□ 2.26
CD55-209ENST00000488171 TRPM2O94759 1503 aa29.2■■■□□ 2.26
CD55-209ENST00000488171 FAM135BQ49AJ0 1406 aa29.17■■■□□ 2.26
CD55-209ENST00000488171 PIK3R4Q99570 1358 aa29.15■■■□□ 2.26
CD55-209ENST00000488171 TRIM52Q96A61 297 aa29.14■■■□□ 2.26
CD55-209ENST00000488171 NRXN3Q9Y4C0 1643 aa29.14■■■□□ 2.26
CD55-209ENST00000488171 MSH6P52701 1360 aa29.13■■■□□ 2.25
CD55-209ENST00000488171 SETBP1Q9Y6X0 1596 aa29.12■■■□□ 2.25
CD55-209ENST00000488171 ZNF326Q5BKZ1 582 aaKnown RBP29.12■■■□□ 2.25
CD55-209ENST00000488171 ROBO1Q9Y6N7 1651 aa29.12■■■□□ 2.25
CD55-209ENST00000488171 PTPRUQ92729 1446 aa29.1■■■□□ 2.25
CD55-209ENST00000488171 NEXMIFQ5QGS0 1516 aa29.1■■■□□ 2.25
CD55-209ENST00000488171 NCOA3Q9Y6Q9 1424 aa29.09■■■□□ 2.25
CD55-209ENST00000488171 KIF1BO60333 1816 aa29.09■■■□□ 2.25
CD55-209ENST00000488171 SLC4A1APQ9BWU0 796 aaKnown RBP29.07■■■□□ 2.24
CD55-209ENST00000488171 SOCS7O14512 581 aa29.05■■■□□ 2.24
CD55-209ENST00000488171 AMOTL2Q9Y2J4 779 aa29.04■■■□□ 2.24
CD55-209ENST00000488171 SLAIN2Q9P270 581 aa29.03■■■□□ 2.24
CD55-209ENST00000488171 XRN1Q8IZH2 1706 aaKnown RBP29.03■■■□□ 2.24
CD55-209ENST00000488171 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.01■■■□□ 2.23
CD55-209ENST00000488171 METP08581 1390 aa28.99■■■□□ 2.23
CD55-209ENST00000488171 C14orf37Q86TY3 774 aa28.99■■■□□ 2.23
CD55-209ENST00000488171 C19orf44Q9H6X5 657 aa28.97■■■□□ 2.23
CD55-209ENST00000488171 FOXD1Q16676 465 aa28.96■■■□□ 2.23
CD55-209ENST00000488171 PHF23Q9BUL5 403 aaPredicted RBP28.94■■■□□ 2.22
CD55-209ENST00000488171 PHLPP1O60346 1717 aa28.92■■■□□ 2.22
CD55-209ENST00000488171 CADPS2Q86UW7 1296 aa28.92■■■□□ 2.22
CD55-209ENST00000488171 VGFO15240 615 aaPredicted RBP28.9■■■□□ 2.22
CD55-209ENST00000488171 ATF3P18847 181 aa28.9■■■□□ 2.22
CD55-209ENST00000488171 SETD1AO15047 1707 aaKnown RBP28.9■■■□□ 2.22
CD55-209ENST00000488171 RPGRIP1LQ68CZ1 1315 aa28.9■■■□□ 2.22
CD55-209ENST00000488171 PPLO60437 1756 aa28.9■■■□□ 2.22
CD55-209ENST00000488171 MPHOSPH9Q99550 1183 aa28.89■■■□□ 2.22
CD55-209ENST00000488171 DCCP43146 1447 aa28.87■■■□□ 2.21
CD55-209ENST00000488171 COL16A1Q07092 1604 aaPredicted RBP28.86■■■□□ 2.21
CD55-209ENST00000488171 CCDC144AA2RUR9 1427 aa28.86■■■□□ 2.21
CD55-209ENST00000488171 SETD5Q9C0A6 1442 aa28.84■■■□□ 2.21
CD55-209ENST00000488171 AHDC1Q5TGY3 1603 aaPredicted RBP28.83■■■□□ 2.21
CD55-209ENST00000488171 RGS17Q9UGC6 210 aaPredicted RBP28.82■■■□□ 2.2
CD55-209ENST00000488171 SPATA31E1Q6ZUB1 1445 aa28.81■■■□□ 2.2
CD55-209ENST00000488171 NALCNQ8IZF0 1738 aa28.81■■■□□ 2.2
CD55-209ENST00000488171 ADGRL3Q9HAR2 1447 aa28.81■■■□□ 2.2
CD55-209ENST00000488171 JCADQ9P266 1359 aa28.8■■■□□ 2.2
CD55-209ENST00000488171 BRINP3Q76B58 766 aa28.79■■■□□ 2.2
CD55-209ENST00000488171 MST1RQ04912 1400 aa28.79■■■□□ 2.2
CD55-209ENST00000488171 PTCH1Q13635 1447 aa28.79■■■□□ 2.2
CD55-209ENST00000488171 ACIN1Q9UKV3 1341 aaKnown RBP28.78■■■□□ 2.2
CD55-209ENST00000488171 PRAG1Q86YV5 1406 aa28.77■■■□□ 2.2
CD55-209ENST00000488171 IFT172Q9UG01 1749 aa28.77■■■□□ 2.2
CD55-209ENST00000488171 ROBO2Q9HCK4 1378 aa28.76■■■□□ 2.19
CD55-209ENST00000488171 RGL3Q3MIN7 710 aa28.75■■■□□ 2.19
CD55-209ENST00000488171 ASXL1Q8IXJ9 1541 aa28.75■■■□□ 2.19
CD55-209ENST00000488171 ADGRF5Q8IZF2 1346 aa28.75■■■□□ 2.19
CD55-209ENST00000488171 RAB3GAP2Q9H2M9 1393 aa28.74■■■□□ 2.19
CD55-209ENST00000488171 ANKRD30BQ9BXX2 1392 aa28.71■■■□□ 2.19
CD55-209ENST00000488171 SHPRHQ149N8 1683 aa28.7■■■□□ 2.18
CD55-209ENST00000488171 NHSL1Q5SYE7 1610 aa28.69■■■□□ 2.18
CD55-209ENST00000488171 LRP6O75581 1613 aa28.67■■■□□ 2.18
CD55-209ENST00000488171 SPATA31A6Q5VVP1 1343 aa28.66■■■□□ 2.18
CD55-209ENST00000488171 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
CD55-209ENST00000488171 POTEAQ6S8J7 498 aa28.64■■■□□ 2.18
CD55-209ENST00000488171 C1orf167Q5SNV9 1468 aa28.64■■■□□ 2.18
CD55-209ENST00000488171 TECPR2O15040 1411 aa28.6■■■□□ 2.17
CD55-209ENST00000488171 DDX17Q92841 729 aaKnown RBP28.6■■■□□ 2.17
CD55-209ENST00000488171 LRPPRCP42704 1394 aaKnown RBP28.58■■■□□ 2.17
CD55-209ENST00000488171 KNDC1Q76NI1 1749 aa28.57■■■□□ 2.16
CD55-209ENST00000488171 LAMC1P11047 1609 aa28.57■■■□□ 2.16
CD55-209ENST00000488171 TMEM132EQ6IEE7 984 aa28.57■■■□□ 2.16
CD55-209ENST00000488171 STK26Q9P289 416 aa28.57■■■□□ 2.16
CD55-209ENST00000488171 NRXN1Q9ULB1 1477 aa28.57■■■□□ 2.16
CD55-209ENST00000488171 MYOM2P54296 1465 aa28.56■■■□□ 2.16
CD55-209ENST00000488171 ABCC11Q96J66 1382 aa28.56■■■□□ 2.16
CD55-209ENST00000488171 CDC42BPGQ6DT37 1551 aa28.55■■■□□ 2.16
CD55-209ENST00000488171 ORAI2Q96SN7 254 aa28.55■■■□□ 2.16
CD55-209ENST00000488171 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms