RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 DHX57Q6P158 1386 aaKnown RBP25.22■■□□□ 1.63
SHROOM1-205ENST00000488072 EID1Q9Y6B2 187 aa25.2■■□□□ 1.62
SHROOM1-205ENST00000488072 KDM5AP29375 1690 aaKnown RBP25.2■■□□□ 1.62
SHROOM1-205ENST00000488072 POLR1AO95602 1720 aaPredicted RBP25.18■■□□□ 1.62
SHROOM1-205ENST00000488072 SLC26A8Q96RN1 970 aa25.17■■□□□ 1.62
SHROOM1-205ENST00000488072 DMRT2Q9Y5R5 561 aa25.17■■□□□ 1.62
SHROOM1-205ENST00000488072 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
SHROOM1-205ENST00000488072 ZNF335Q9H4Z2 1342 aaPredicted RBP25.16■■□□□ 1.62
SHROOM1-205ENST00000488072 MED14O60244 1454 aa25.16■■□□□ 1.62
SHROOM1-205ENST00000488072 PPP1R15AO75807 674 aaPredicted RBP25.16■■□□□ 1.62
SHROOM1-205ENST00000488072 SIN3AQ96ST3 1273 aa25.16■■□□□ 1.62
SHROOM1-205ENST00000488072 BCANQ96GW7 911 aa25.14■■□□□ 1.62
SHROOM1-205ENST00000488072 NEXMIFQ5QGS0 1516 aa25.13■■□□□ 1.61
SHROOM1-205ENST00000488072 KIF1BO60333 1816 aa25.13■■□□□ 1.61
SHROOM1-205ENST00000488072 IQGAP1P46940 1657 aa25.1■■□□□ 1.61
SHROOM1-205ENST00000488072 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.1■■□□□ 1.61
SHROOM1-205ENST00000488072 PLEKHG1Q9ULL1 1385 aa25.09■■□□□ 1.61
SHROOM1-205ENST00000488072 ADGRF5Q8IZF2 1346 aa25.08■■□□□ 1.6
SHROOM1-205ENST00000488072 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
SHROOM1-205ENST00000488072 ADAMTS13Q76LX8 1427 aa25.06■■□□□ 1.6
SHROOM1-205ENST00000488072 HDGFP51858 240 aaKnown RBP25.05■■□□□ 1.6
SHROOM1-205ENST00000488072 RPGRIP1LQ68CZ1 1315 aa25.03■■□□□ 1.6
SHROOM1-205ENST00000488072 LTBP4Q8N2S1 1624 aa25.02■■□□□ 1.6
SHROOM1-205ENST00000488072 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
SHROOM1-205ENST00000488072 NRXN3Q9Y4C0 1643 aa25.01■■□□□ 1.59
SHROOM1-205ENST00000488072 PPLO60437 1756 aa24.99■■□□□ 1.59
SHROOM1-205ENST00000488072 RBM33Q96EV2 1170 aaKnown RBP24.99■■□□□ 1.59
SHROOM1-205ENST00000488072 STRCP1A6NGW2 1772 aa24.98■■□□□ 1.59
SHROOM1-205ENST00000488072 VGFO15240 615 aaPredicted RBP24.98■■□□□ 1.59
SHROOM1-205ENST00000488072 DCAF11Q8TEB1 546 aa24.98■■□□□ 1.59
SHROOM1-205ENST00000488072 TBX22Q9Y458 520 aa24.97■■□□□ 1.59
SHROOM1-205ENST00000488072 METP08581 1390 aa24.96■■□□□ 1.59
SHROOM1-205ENST00000488072 PTPRUQ92729 1446 aa24.95■■□□□ 1.59
SHROOM1-205ENST00000488072 IFT172Q9UG01 1749 aa24.95■■□□□ 1.58
SHROOM1-205ENST00000488072 CERKQ8TCT0 537 aa24.94■■□□□ 1.58
SHROOM1-205ENST00000488072 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
SHROOM1-205ENST00000488072 L3MBTL2Q969R5 705 aa24.93■■□□□ 1.58
SHROOM1-205ENST00000488072 KCNA6P17658 529 aa24.91■■□□□ 1.58
SHROOM1-205ENST00000488072 CFAP70Q5T0N1 1121 aa24.9■■□□□ 1.58
SHROOM1-205ENST00000488072 TMEM132EQ6IEE7 984 aa24.9■■□□□ 1.58
SHROOM1-205ENST00000488072 ALKQ9UM73 1620 aa24.89■■□□□ 1.57
SHROOM1-205ENST00000488072 PIK3C2GO75747 1445 aa24.88■■□□□ 1.57
SHROOM1-205ENST00000488072 AMOTL2Q9Y2J4 779 aa24.87■■□□□ 1.57
SHROOM1-205ENST00000488072 MYOM2P54296 1465 aa24.87■■□□□ 1.57
SHROOM1-205ENST00000488072 NRXN1Q9ULB1 1477 aa24.87■■□□□ 1.57
SHROOM1-205ENST00000488072 LRRC7Q96NW7 1537 aa24.86■■□□□ 1.57
SHROOM1-205ENST00000488072 ASXL1Q8IXJ9 1541 aa24.85■■□□□ 1.57
SHROOM1-205ENST00000488072 SETD1AO15047 1707 aaKnown RBP24.84■■□□□ 1.57
SHROOM1-205ENST00000488072 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
SHROOM1-205ENST00000488072 PROSER2Q86WR7 435 aaPredicted RBP24.83■■□□□ 1.57
SHROOM1-205ENST00000488072 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.57
SHROOM1-205ENST00000488072 C14orf93Q9H972 538 aaKnown RBP24.83■■□□□ 1.57
SHROOM1-205ENST00000488072 STK26Q9P289 416 aa24.82■■□□□ 1.56
SHROOM1-205ENST00000488072 NWD1Q149M9 1564 aa24.81■■□□□ 1.56
SHROOM1-205ENST00000488072 CPS1P31327 1500 aa24.81■■□□□ 1.56
SHROOM1-205ENST00000488072 TMEM94Q12767 1356 aa24.8■■□□□ 1.56
SHROOM1-205ENST00000488072 CHD2O14647 1828 aaKnown RBP24.8■■□□□ 1.56
SHROOM1-205ENST00000488072 PIK3R4Q99570 1358 aa24.79■■□□□ 1.56
SHROOM1-205ENST00000488072 NBPF1Q3BBV0 1214 aa24.77■■□□□ 1.56
SHROOM1-205ENST00000488072 NBPF8Q3BBV2 869 aa24.77■■□□□ 1.56
SHROOM1-205ENST00000488072 ROBO2Q9HCK4 1378 aa24.76■■□□□ 1.55
SHROOM1-205ENST00000488072 PRAG1Q86YV5 1406 aa24.75■■□□□ 1.55
SHROOM1-205ENST00000488072 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
SHROOM1-205ENST00000488072 TONSLQ96HA7 1378 aa24.74■■□□□ 1.55
SHROOM1-205ENST00000488072 XIRP1Q702N8 1843 aaKnown RBP24.74■■□□□ 1.55
SHROOM1-205ENST00000488072 NKTRP30414 1462 aaKnown RBP24.72■■□□□ 1.55
SHROOM1-205ENST00000488072 PLEKHH1Q9ULM0 1364 aa24.72■■□□□ 1.55
SHROOM1-205ENST00000488072 WAPLQ7Z5K2 1190 aa24.72■■□□□ 1.55
SHROOM1-205ENST00000488072 YTHDC2Q9H6S0 1430 aaKnown RBP24.7■■□□□ 1.55
SHROOM1-205ENST00000488072 LRPPRCP42704 1394 aaKnown RBP24.7■■□□□ 1.55
SHROOM1-205ENST00000488072 ADGRB1O14514 1584 aa24.7■■□□□ 1.54
SHROOM1-205ENST00000488072 UBAP1LF5GYI3 381 aa24.69■■□□□ 1.54
SHROOM1-205ENST00000488072 TRAK1Q9UPV9 953 aa24.68■■□□□ 1.54
SHROOM1-205ENST00000488072 ILDR1Q86SU0 546 aaPredicted RBP24.67■■□□□ 1.54
SHROOM1-205ENST00000488072 C14orf37Q86TY3 774 aa24.67■■□□□ 1.54
SHROOM1-205ENST00000488072 STAC3Q96MF2 364 aa24.67■■□□□ 1.54
SHROOM1-205ENST00000488072 SAFB2Q14151 953 aaKnown RBP eCLIP24.65■■□□□ 1.54
SHROOM1-205ENST00000488072 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
SHROOM1-205ENST00000488072 PIP4K2BP78356 416 aa24.64■■□□□ 1.54
SHROOM1-205ENST00000488072 CLSPNQ9HAW4 1339 aa24.63■■□□□ 1.53
SHROOM1-205ENST00000488072 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
SHROOM1-205ENST00000488072 PTCH1Q13635 1447 aa24.62■■□□□ 1.53
SHROOM1-205ENST00000488072 FBXO41Q8TF61 875 aa24.62■■□□□ 1.53
SHROOM1-205ENST00000488072 TECPR2O15040 1411 aa24.61■■□□□ 1.53
SHROOM1-205ENST00000488072 LAMC1P11047 1609 aa24.61■■□□□ 1.53
SHROOM1-205ENST00000488072 PRAM1Q96QH2 718 aa24.61■■□□□ 1.53
SHROOM1-205ENST00000488072 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
SHROOM1-205ENST00000488072 MSH6P52701 1360 aa24.58■■□□□ 1.53
SHROOM1-205ENST00000488072 C19orf44Q9H6X5 657 aa24.57■■□□□ 1.52
SHROOM1-205ENST00000488072 TRPM1Q7Z4N2 1603 aa24.56■■□□□ 1.52
SHROOM1-205ENST00000488072 ADGRL3Q9HAR2 1447 aa24.55■■□□□ 1.52
SHROOM1-205ENST00000488072 TOM1O60784 492 aa24.55■■□□□ 1.52
SHROOM1-205ENST00000488072 NALCNQ8IZF0 1738 aa24.55■■□□□ 1.52
SHROOM1-205ENST00000488072 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
SHROOM1-205ENST00000488072 POGKQ9P215 609 aa24.54■■□□□ 1.52
SHROOM1-205ENST00000488072 KNDC1Q76NI1 1749 aa24.54■■□□□ 1.52
SHROOM1-205ENST00000488072 ROCK2O75116 1388 aaKnown RBP24.54■■□□□ 1.52
SHROOM1-205ENST00000488072 NCOA3Q9Y6Q9 1424 aa24.53■■□□□ 1.52
SHROOM1-205ENST00000488072 NUTM2FA1L443 756 aa24.53■■□□□ 1.52
SHROOM1-205ENST00000488072 HIRIP3Q9BW71 556 aaPredicted RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms