RNA–Protein interactions for RNA: ENST00000487897.5

PRKCD-206, Transcript of protein kinase C delta, humanhuman

TSL 4

Gene PRKCD, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-206ENST00000487897 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
PRKCD-206ENST00000487897 BCANQ96GW7 911 aa25.23■■□□□ 1.63
PRKCD-206ENST00000487897 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
PRKCD-206ENST00000487897 MYO5BQ9ULV0 1848 aa25.23■■□□□ 1.63
PRKCD-206ENST00000487897 TRPM2O94759 1503 aa25.22■■□□□ 1.63
PRKCD-206ENST00000487897 PLEKHG1Q9ULL1 1385 aa25.21■■□□□ 1.63
PRKCD-206ENST00000487897 MPHOSPH9Q99550 1183 aa25.2■■□□□ 1.62
PRKCD-206ENST00000487897 UBAP1LF5GYI3 381 aa25.18■■□□□ 1.62
PRKCD-206ENST00000487897 NUTM2DQ5VT03 806 aaPredicted RBP25.18■■□□□ 1.62
PRKCD-206ENST00000487897 ZNF326Q5BKZ1 582 aaKnown RBP25.17■■□□□ 1.62
PRKCD-206ENST00000487897 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
PRKCD-206ENST00000487897 KCNA6P17658 529 aa25.16■■□□□ 1.62
PRKCD-206ENST00000487897 FOXD1Q16676 465 aa25.16■■□□□ 1.62
PRKCD-206ENST00000487897 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
PRKCD-206ENST00000487897 STRCP1A6NGW2 1772 aa25.16■■□□□ 1.62
PRKCD-206ENST00000487897 LRRC7Q96NW7 1537 aa25.15■■□□□ 1.62
PRKCD-206ENST00000487897 RAB3GAP2Q9H2M9 1393 aa25.15■■□□□ 1.62
PRKCD-206ENST00000487897 TBX22Q9Y458 520 aa25.14■■□□□ 1.62
PRKCD-206ENST00000487897 TOM1O60784 492 aa25.11■■□□□ 1.61
PRKCD-206ENST00000487897 ADAMTS13Q76LX8 1427 aa25.08■■□□□ 1.61
PRKCD-206ENST00000487897 HRCP23327 699 aa25.07■■□□□ 1.6
PRKCD-206ENST00000487897 KIF1BO60333 1816 aa25.06■■□□□ 1.6
PRKCD-206ENST00000487897 CCDC144AA2RUR9 1427 aa25.05■■□□□ 1.6
PRKCD-206ENST00000487897 PROSER2Q86WR7 435 aaPredicted RBP25.05■■□□□ 1.6
PRKCD-206ENST00000487897 RPGRIP1LQ68CZ1 1315 aa25.04■■□□□ 1.6
PRKCD-206ENST00000487897 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
PRKCD-206ENST00000487897 DIP2AQ14689 1571 aa25.03■■□□□ 1.6
PRKCD-206ENST00000487897 TMEM94Q12767 1356 aa25.03■■□□□ 1.6
PRKCD-206ENST00000487897 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
PRKCD-206ENST00000487897 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
PRKCD-206ENST00000487897 NWD1Q149M9 1564 aa25.02■■□□□ 1.6
PRKCD-206ENST00000487897 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
PRKCD-206ENST00000487897 PIP4K2BP78356 416 aa25.02■■□□□ 1.6
PRKCD-206ENST00000487897 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
PRKCD-206ENST00000487897 SETBP1Q9Y6X0 1596 aa25■■□□□ 1.59
PRKCD-206ENST00000487897 RBM33Q96EV2 1170 aaKnown RBP24.98■■□□□ 1.59
PRKCD-206ENST00000487897 CHD2O14647 1828 aaKnown RBP24.98■■□□□ 1.59
PRKCD-206ENST00000487897 ALKQ9UM73 1620 aa24.96■■□□□ 1.59
PRKCD-206ENST00000487897 SPATA31E1Q6ZUB1 1445 aa24.95■■□□□ 1.59
PRKCD-206ENST00000487897 NRXN3Q9Y4C0 1643 aa24.95■■□□□ 1.58
PRKCD-206ENST00000487897 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
PRKCD-206ENST00000487897 AMOTL2Q9Y2J4 779 aa24.95■■□□□ 1.58
PRKCD-206ENST00000487897 XIRP1Q702N8 1843 aaKnown RBP24.95■■□□□ 1.58
PRKCD-206ENST00000487897 METP08581 1390 aa24.93■■□□□ 1.58
PRKCD-206ENST00000487897 PTPRUQ92729 1446 aa24.92■■□□□ 1.58
PRKCD-206ENST00000487897 NCOA3Q9Y6Q9 1424 aa24.91■■□□□ 1.58
PRKCD-206ENST00000487897 MSH6P52701 1360 aa24.89■■□□□ 1.57
PRKCD-206ENST00000487897 ANKRD30BQ9BXX2 1392 aa24.89■■□□□ 1.57
PRKCD-206ENST00000487897 HSPA1LP34931 641 aa24.88■■□□□ 1.57
PRKCD-206ENST00000487897 PPLO60437 1756 aa24.88■■□□□ 1.57
PRKCD-206ENST00000487897 C14orf37Q86TY3 774 aa24.86■■□□□ 1.57
PRKCD-206ENST00000487897 ADGRF5Q8IZF2 1346 aa24.86■■□□□ 1.57
PRKCD-206ENST00000487897 C19orf44Q9H6X5 657 aa24.83■■□□□ 1.57
PRKCD-206ENST00000487897 FAM135BQ49AJ0 1406 aa24.82■■□□□ 1.56
PRKCD-206ENST00000487897 XRN1Q8IZH2 1706 aaKnown RBP24.82■■□□□ 1.56
PRKCD-206ENST00000487897 SLAIN2Q9P270 581 aa24.8■■□□□ 1.56
PRKCD-206ENST00000487897 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
PRKCD-206ENST00000487897 ATF3P18847 181 aa24.77■■□□□ 1.56
PRKCD-206ENST00000487897 SETD1AO15047 1707 aaKnown RBP24.77■■□□□ 1.56
PRKCD-206ENST00000487897 IFT172Q9UG01 1749 aa24.77■■□□□ 1.56
PRKCD-206ENST00000487897 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
PRKCD-206ENST00000487897 PTCH1Q13635 1447 aa24.73■■□□□ 1.55
PRKCD-206ENST00000487897 MYOM2P54296 1465 aa24.72■■□□□ 1.55
PRKCD-206ENST00000487897 PRAG1Q86YV5 1406 aa24.72■■□□□ 1.55
PRKCD-206ENST00000487897 ROBO2Q9HCK4 1378 aa24.72■■□□□ 1.55
PRKCD-206ENST00000487897 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.72■■□□□ 1.55
PRKCD-206ENST00000487897 DCCP43146 1447 aa24.71■■□□□ 1.55
PRKCD-206ENST00000487897 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.55
PRKCD-206ENST00000487897 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
PRKCD-206ENST00000487897 ADGRL3Q9HAR2 1447 aa24.69■■□□□ 1.54
PRKCD-206ENST00000487897 ROBO1Q9Y6N7 1651 aa24.69■■□□□ 1.54
PRKCD-206ENST00000487897 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
PRKCD-206ENST00000487897 STAC3Q96MF2 364 aa24.68■■□□□ 1.54
PRKCD-206ENST00000487897 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
PRKCD-206ENST00000487897 DCAF11Q8TEB1 546 aa24.67■■□□□ 1.54
PRKCD-206ENST00000487897 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
PRKCD-206ENST00000487897 CFAP70Q5T0N1 1121 aa24.66■■□□□ 1.54
PRKCD-206ENST00000487897 STK26Q9P289 416 aa24.66■■□□□ 1.54
PRKCD-206ENST00000487897 DISP3Q9P2K9 1392 aa24.66■■□□□ 1.54
PRKCD-206ENST00000487897 KDM2AQ9Y2K7 1162 aa24.65■■□□□ 1.54
PRKCD-206ENST00000487897 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
PRKCD-206ENST00000487897 TECPR2O15040 1411 aa24.63■■□□□ 1.53
PRKCD-206ENST00000487897 ASXL1Q8IXJ9 1541 aa24.62■■□□□ 1.53
PRKCD-206ENST00000487897 DHX57Q6P158 1386 aaKnown RBP24.62■■□□□ 1.53
PRKCD-206ENST00000487897 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
PRKCD-206ENST00000487897 MST1RQ04912 1400 aa24.61■■□□□ 1.53
PRKCD-206ENST00000487897 BRINP3Q76B58 766 aa24.6■■□□□ 1.53
PRKCD-206ENST00000487897 NALCNQ8IZF0 1738 aa24.59■■□□□ 1.53
PRKCD-206ENST00000487897 WAPLQ7Z5K2 1190 aa24.59■■□□□ 1.53
PRKCD-206ENST00000487897 SIRT1Q96EB6 747 aa24.59■■□□□ 1.53
PRKCD-206ENST00000487897 LAMC1P11047 1609 aa24.58■■□□□ 1.53
PRKCD-206ENST00000487897 PLEKHH1Q9ULM0 1364 aa24.54■■□□□ 1.52
PRKCD-206ENST00000487897 KNDC1Q76NI1 1749 aa24.53■■□□□ 1.52
PRKCD-206ENST00000487897 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
PRKCD-206ENST00000487897 C1orf167Q5SNV9 1468 aa24.52■■□□□ 1.52
PRKCD-206ENST00000487897 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
PRKCD-206ENST00000487897 AHDC1Q5TGY3 1603 aaPredicted RBP24.51■■□□□ 1.51
PRKCD-206ENST00000487897 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
PRKCD-206ENST00000487897 SIN3AQ96ST3 1273 aa24.49■■□□□ 1.51
PRKCD-206ENST00000487897 JCADQ9P266 1359 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms