RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 CPS1P31327 1500 aa25.52■■□□□ 1.68
HMG20B-212ENST00000487894 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
HMG20B-212ENST00000487894 RAB3GAP2Q9H2M9 1393 aa25.48■■□□□ 1.67
HMG20B-212ENST00000487894 CHGAP10645 457 aaKnown RBP25.47■■□□□ 1.67
HMG20B-212ENST00000487894 PLEKHG1Q9ULL1 1385 aa25.44■■□□□ 1.66
HMG20B-212ENST00000487894 XIRP1Q702N8 1843 aaKnown RBP25.43■■□□□ 1.66
HMG20B-212ENST00000487894 NEXMIFQ5QGS0 1516 aa25.42■■□□□ 1.66
HMG20B-212ENST00000487894 ACIN1Q9UKV3 1341 aaKnown RBP25.41■■□□□ 1.66
HMG20B-212ENST00000487894 NWD1Q149M9 1564 aa25.41■■□□□ 1.66
HMG20B-212ENST00000487894 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
HMG20B-212ENST00000487894 MPHOSPH9Q99550 1183 aa25.4■■□□□ 1.66
HMG20B-212ENST00000487894 NRXN3Q9Y4C0 1643 aa25.4■■□□□ 1.66
HMG20B-212ENST00000487894 DIP2AQ14689 1571 aa25.39■■□□□ 1.66
HMG20B-212ENST00000487894 FOXD1Q16676 465 aa25.39■■□□□ 1.66
HMG20B-212ENST00000487894 PPLO60437 1756 aa25.39■■□□□ 1.65
HMG20B-212ENST00000487894 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
HMG20B-212ENST00000487894 PPP1R15AO75807 674 aaPredicted RBP25.37■■□□□ 1.65
HMG20B-212ENST00000487894 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.37■■□□□ 1.65
HMG20B-212ENST00000487894 HDGFP51858 240 aaKnown RBP25.36■■□□□ 1.65
HMG20B-212ENST00000487894 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
HMG20B-212ENST00000487894 SETBP1Q9Y6X0 1596 aa25.35■■□□□ 1.65
HMG20B-212ENST00000487894 IFT172Q9UG01 1749 aa25.34■■□□□ 1.65
HMG20B-212ENST00000487894 NUTM2DQ5VT03 806 aaPredicted RBP25.34■■□□□ 1.65
HMG20B-212ENST00000487894 ADAMTS13Q76LX8 1427 aa25.34■■□□□ 1.65
HMG20B-212ENST00000487894 CCDC144AA2RUR9 1427 aa25.32■■□□□ 1.64
HMG20B-212ENST00000487894 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
HMG20B-212ENST00000487894 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
HMG20B-212ENST00000487894 NKTRP30414 1462 aaKnown RBP25.3■■□□□ 1.64
HMG20B-212ENST00000487894 BCANQ96GW7 911 aa25.3■■□□□ 1.64
HMG20B-212ENST00000487894 SETD1AO15047 1707 aaKnown RBP25.29■■□□□ 1.64
HMG20B-212ENST00000487894 ALKQ9UM73 1620 aa25.29■■□□□ 1.64
HMG20B-212ENST00000487894 HRCP23327 699 aa25.27■■□□□ 1.64
HMG20B-212ENST00000487894 SPATA31E1Q6ZUB1 1445 aa25.26■■□□□ 1.63
HMG20B-212ENST00000487894 KCNA6P17658 529 aa25.25■■□□□ 1.63
HMG20B-212ENST00000487894 XRN1Q8IZH2 1706 aaKnown RBP25.24■■□□□ 1.63
HMG20B-212ENST00000487894 TBX22Q9Y458 520 aa25.24■■□□□ 1.63
HMG20B-212ENST00000487894 UBAP1LF5GYI3 381 aa25.22■■□□□ 1.63
HMG20B-212ENST00000487894 PIK3R4Q99570 1358 aa25.21■■□□□ 1.63
HMG20B-212ENST00000487894 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
HMG20B-212ENST00000487894 PTPRUQ92729 1446 aa25.19■■□□□ 1.62
HMG20B-212ENST00000487894 TMEM94Q12767 1356 aa25.18■■□□□ 1.62
HMG20B-212ENST00000487894 ANKRD30BQ9BXX2 1392 aa25.18■■□□□ 1.62
HMG20B-212ENST00000487894 VGFO15240 615 aaPredicted RBP25.13■■□□□ 1.61
HMG20B-212ENST00000487894 TOM1O60784 492 aa25.13■■□□□ 1.61
HMG20B-212ENST00000487894 PROSER2Q86WR7 435 aaPredicted RBP25.13■■□□□ 1.61
HMG20B-212ENST00000487894 METP08581 1390 aa25.13■■□□□ 1.61
HMG20B-212ENST00000487894 RGL3Q3MIN7 710 aa25.11■■□□□ 1.61
HMG20B-212ENST00000487894 RBM33Q96EV2 1170 aaKnown RBP25.1■■□□□ 1.61
HMG20B-212ENST00000487894 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.09■■□□□ 1.61
HMG20B-212ENST00000487894 MYOM2P54296 1465 aa25.08■■□□□ 1.6
HMG20B-212ENST00000487894 AMOTL2Q9Y2J4 779 aa25.07■■□□□ 1.6
HMG20B-212ENST00000487894 ADGRF5Q8IZF2 1346 aa25.07■■□□□ 1.6
HMG20B-212ENST00000487894 PIK3C2GO75747 1445 aa25.06■■□□□ 1.6
HMG20B-212ENST00000487894 NCOA3Q9Y6Q9 1424 aa25.06■■□□□ 1.6
HMG20B-212ENST00000487894 PIP4K2BP78356 416 aa25.06■■□□□ 1.6
HMG20B-212ENST00000487894 NALCNQ8IZF0 1738 aa25.06■■□□□ 1.6
HMG20B-212ENST00000487894 LAMC1P11047 1609 aa25.05■■□□□ 1.6
HMG20B-212ENST00000487894 NRXN1Q9ULB1 1477 aa25.05■■□□□ 1.6
HMG20B-212ENST00000487894 ASXL1Q8IXJ9 1541 aa25.05■■□□□ 1.6
HMG20B-212ENST00000487894 SCAF1Q9H7N4 1312 aaKnown RBP25.05■■□□□ 1.6
HMG20B-212ENST00000487894 MSH6P52701 1360 aa25.04■■□□□ 1.6
HMG20B-212ENST00000487894 KNDC1Q76NI1 1749 aa25.03■■□□□ 1.6
HMG20B-212ENST00000487894 ROBO1Q9Y6N7 1651 aa25.03■■□□□ 1.6
HMG20B-212ENST00000487894 PRAG1Q86YV5 1406 aa25.03■■□□□ 1.6
HMG20B-212ENST00000487894 PTCH1Q13635 1447 aa25.01■■□□□ 1.59
HMG20B-212ENST00000487894 TRIM26Q12899 539 aaPredicted RBP24.98■■□□□ 1.59
HMG20B-212ENST00000487894 HSPA1LP34931 641 aa24.94■■□□□ 1.58
HMG20B-212ENST00000487894 DCCP43146 1447 aa24.94■■□□□ 1.58
HMG20B-212ENST00000487894 FAM135BQ49AJ0 1406 aa24.94■■□□□ 1.58
HMG20B-212ENST00000487894 ADGRL3Q9HAR2 1447 aa24.94■■□□□ 1.58
HMG20B-212ENST00000487894 ROBO2Q9HCK4 1378 aa24.93■■□□□ 1.58
HMG20B-212ENST00000487894 C14orf37Q86TY3 774 aa24.93■■□□□ 1.58
HMG20B-212ENST00000487894 TECPR2O15040 1411 aa24.92■■□□□ 1.58
HMG20B-212ENST00000487894 DHX57Q6P158 1386 aaKnown RBP24.92■■□□□ 1.58
HMG20B-212ENST00000487894 C19orf44Q9H6X5 657 aa24.9■■□□□ 1.58
HMG20B-212ENST00000487894 ILDR2Q71H61 639 aa24.89■■□□□ 1.58
HMG20B-212ENST00000487894 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.57
HMG20B-212ENST00000487894 DISP3Q9P2K9 1392 aa24.89■■□□□ 1.57
HMG20B-212ENST00000487894 PHLPP1O60346 1717 aa24.88■■□□□ 1.57
HMG20B-212ENST00000487894 ADGRB1O14514 1584 aa24.88■■□□□ 1.57
HMG20B-212ENST00000487894 YTHDC2Q9H6S0 1430 aaKnown RBP24.87■■□□□ 1.57
HMG20B-212ENST00000487894 C14orf93Q9H972 538 aaKnown RBP24.87■■□□□ 1.57
HMG20B-212ENST00000487894 CADPS2Q86UW7 1296 aa24.86■■□□□ 1.57
HMG20B-212ENST00000487894 DCAF11Q8TEB1 546 aa24.86■■□□□ 1.57
HMG20B-212ENST00000487894 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
HMG20B-212ENST00000487894 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
HMG20B-212ENST00000487894 TMEM132EQ6IEE7 984 aa24.85■■□□□ 1.57
HMG20B-212ENST00000487894 KIAA1210Q9ULL0 1709 aa24.85■■□□□ 1.57
HMG20B-212ENST00000487894 MST1RQ04912 1400 aa24.85■■□□□ 1.57
HMG20B-212ENST00000487894 CDC42BPGQ6DT37 1551 aa24.84■■□□□ 1.57
HMG20B-212ENST00000487894 ABCC11Q96J66 1382 aa24.84■■□□□ 1.57
HMG20B-212ENST00000487894 ATF3P18847 181 aa24.84■■□□□ 1.57
HMG20B-212ENST00000487894 KDM2AQ9Y2K7 1162 aa24.82■■□□□ 1.56
HMG20B-212ENST00000487894 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
HMG20B-212ENST00000487894 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
HMG20B-212ENST00000487894 STK26Q9P289 416 aa24.81■■□□□ 1.56
HMG20B-212ENST00000487894 COL16A1Q07092 1604 aaPredicted RBP24.81■■□□□ 1.56
HMG20B-212ENST00000487894 NHSL1Q5SYE7 1610 aa24.81■■□□□ 1.56
HMG20B-212ENST00000487894 DLC1Q96QB1 1528 aa24.8■■□□□ 1.56
HMG20B-212ENST00000487894 ARHGEF28Q8N1W1 1705 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms