RNA–Protein interactions for RNA: ENST00000487452.1

PPP1R35-204, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 2

Gene PPP1R35, Length 965 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-204	ENST00000487452	RIMS2	Q9UQ26	1411 aa		41.12	■■■■■ 4.17
PPP1R35-204	ENST00000487452	ZFYVE9	O95405	1425 aa		41.11	■■■■■ 4.17
PPP1R35-204	ENST00000487452	FBXO41	Q8TF61	875 aa		41.1	■■■■■ 4.17
PPP1R35-204	ENST00000487452	ZNF326	Q5BKZ1	582 aa	Known RBP	41.09	■■■■■ 4.17
PPP1R35-204	ENST00000487452	MYO5B	Q9ULV0	1848 aa		41.07	■■■■■ 4.17
PPP1R35-204	ENST00000487452	PPP1R15A	O75807	674 aa	Predicted RBP	41.07	■■■■■ 4.17
PPP1R35-204	ENST00000487452	KIF1B	O60333	1816 aa		41.05	■■■■■ 4.16
PPP1R35-204	ENST00000487452	ANKRD30B	Q9BXX2	1392 aa		41.05	■■■■■ 4.16
PPP1R35-204	ENST00000487452	IQGAP1	P46940	1657 aa		41.02	■■■■■ 4.16
PPP1R35-204	ENST00000487452	RPGRIP1L	Q68CZ1	1315 aa		41	■■■■■ 4.15
PPP1R35-204	ENST00000487452	PLEKHG1	Q9ULL1	1385 aa		40.99	■■■■■ 4.15
PPP1R35-204	ENST00000487452	LTBP4	Q8N2S1	1624 aa		40.96	■■■■■ 4.15
PPP1R35-204	ENST00000487452	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	40.95	■■■■■ 4.15
PPP1R35-204	ENST00000487452	BCAN	Q96GW7	911 aa		40.94	■■■■■ 4.14
PPP1R35-204	ENST00000487452	SPATA31E1	Q6ZUB1	1445 aa		40.93	■■■■■ 4.14
PPP1R35-204	ENST00000487452	NUTM2D	Q5VT03	806 aa	Predicted RBP	40.92	■■■■■ 4.14
PPP1R35-204	ENST00000487452	PCGF6	Q9BYE7	350 aa		40.92	■■■■■ 4.14
PPP1R35-204	ENST00000487452	VGF	O15240	615 aa	Predicted RBP	40.89	■■■■■ 4.14
PPP1R35-204	ENST00000487452	NEXMIF	Q5QGS0	1516 aa		40.88	■■■■■ 4.13
PPP1R35-204	ENST00000487452	RGL3	Q3MIN7	710 aa		40.87	■■■■■ 4.13
PPP1R35-204	ENST00000487452	SLC26A8	Q96RN1	970 aa		40.84	■■■■■ 4.13
PPP1R35-204	ENST00000487452	TBX22	Q9Y458	520 aa		40.82	■■■■■ 4.13
PPP1R35-204	ENST00000487452	DHX57	Q6P158	1386 aa	Known RBP	40.81	■■■■■ 4.12
PPP1R35-204	ENST00000487452	SENP3	Q9H4L4	574 aa	Predicted RBP	40.75	■■■■■ 4.11
PPP1R35-204	ENST00000487452	ADAMTS13	Q76LX8	1427 aa		40.75	■■■■■ 4.11
PPP1R35-204	ENST00000487452	DIP2A	Q14689	1571 aa		40.74	■■■■■ 4.11
PPP1R35-204	ENST00000487452	SETBP1	Q9Y6X0	1596 aa		40.73	■■■■■ 4.11
PPP1R35-204	ENST00000487452	CPS1	P31327	1500 aa		40.72	■■■■■ 4.11
PPP1R35-204	ENST00000487452	PPL	O60437	1756 aa		40.71	■■■■■ 4.11
PPP1R35-204	ENST00000487452	KCNA6	P17658	529 aa		40.7	■■■■■ 4.11
PPP1R35-204	ENST00000487452	PIK3R4	Q99570	1358 aa		40.69	■■■■■ 4.1
PPP1R35-204	ENST00000487452	IQSEC2	Q5JU85	1478 aa		40.68	■■■■■ 4.1
PPP1R35-204	ENST00000487452	STAC3	Q96MF2	364 aa		40.67	■■■■■ 4.1
PPP1R35-204	ENST00000487452	ADGRF5	Q8IZF2	1346 aa		40.63	■■■■■ 4.09
PPP1R35-204	ENST00000487452	NRXN3	Q9Y4C0	1643 aa		40.62	■■■■■ 4.09
PPP1R35-204	ENST00000487452	IFT172	Q9UG01	1749 aa		40.61	■■■■■ 4.09
PPP1R35-204	ENST00000487452	MYOM2	P54296	1465 aa		40.59	■■■■■ 4.09
PPP1R35-204	ENST00000487452	DCAF11	Q8TEB1	546 aa		40.56	■■■■■ 4.08
PPP1R35-204	ENST00000487452	NWD1	Q149M9	1564 aa		40.54	■■■■■ 4.08
PPP1R35-204	ENST00000487452	STRCP1	A6NGW2	1772 aa		40.53	■■■■■ 4.08
PPP1R35-204	ENST00000487452	NKTR	P30414	1462 aa	Known RBP	40.53	■■■■■ 4.08
PPP1R35-204	ENST00000487452	PIK3C2G	O75747	1445 aa		40.53	■■■■■ 4.08
PPP1R35-204	ENST00000487452	SIN3A	Q96ST3	1273 aa		40.53	■■■■■ 4.08
PPP1R35-204	ENST00000487452	NRXN1	Q9ULB1	1477 aa		40.52	■■■■■ 4.08
PPP1R35-204	ENST00000487452	MET	P08581	1390 aa		40.52	■■■■■ 4.08
PPP1R35-204	ENST00000487452	ALK	Q9UM73	1620 aa		40.52	■■■■■ 4.08
PPP1R35-204	ENST00000487452	LRRC7	Q96NW7	1537 aa		40.51	■■■■■ 4.08
PPP1R35-204	ENST00000487452	CHD2	O14647	1828 aa	Known RBP	40.51	■■■■■ 4.07
PPP1R35-204	ENST00000487452	AMOTL2	Q9Y2J4	779 aa		40.5	■■■■■ 4.07
PPP1R35-204	ENST00000487452	UBAP1L	F5GYI3	381 aa		40.49	■■■■■ 4.07
PPP1R35-204	ENST00000487452	NEUROD1	Q13562	356 aa		40.49	■■■■■ 4.07
PPP1R35-204	ENST00000487452	KDM2A	Q9Y2K7	1162 aa		40.49	■■■■■ 4.07
PPP1R35-204	ENST00000487452	PROSER2	Q86WR7	435 aa	Predicted RBP	40.48	■■■■■ 4.07
PPP1R35-204	ENST00000487452	PTPRU	Q92729	1446 aa		40.45	■■■■■ 4.07
PPP1R35-204	ENST00000487452	C14orf93	Q9H972	538 aa	Known RBP	40.45	■■■■■ 4.07
PPP1R35-204	ENST00000487452	TMEM94	Q12767	1356 aa		40.4	■■■■■ 4.06
PPP1R35-204	ENST00000487452	SETD1A	O15047	1707 aa	Known RBP	40.39	■■■■■ 4.06
PPP1R35-204	ENST00000487452	CLSPN	Q9HAW4	1339 aa		40.38	■■■■■ 4.05
PPP1R35-204	ENST00000487452	NCOA3	Q9Y6Q9	1424 aa		40.37	■■■■■ 4.05
PPP1R35-204	ENST00000487452	L3MBTL2	Q969R5	705 aa		40.37	■■■■■ 4.05
PPP1R35-204	ENST00000487452	CFAP70	Q5T0N1	1121 aa		40.36	■■■■■ 4.05
PPP1R35-204	ENST00000487452	XRN1	Q8IZH2	1706 aa	Known RBP	40.34	■■■■■ 4.05
PPP1R35-204	ENST00000487452	LAMC1	P11047	1609 aa		40.33	■■■■■ 4.05
PPP1R35-204	ENST00000487452	PRAG1	Q86YV5	1406 aa		40.32	■■■■■ 4.04
PPP1R35-204	ENST00000487452	TOM1	O60784	492 aa		40.29	■■■■■ 4.04
PPP1R35-204	ENST00000487452	TMEM132E	Q6IEE7	984 aa		40.29	■■■■■ 4.04
PPP1R35-204	ENST00000487452	PTCH1	Q13635	1447 aa		40.28	■■■■■ 4.04
PPP1R35-204	ENST00000487452	LRPPRC	P42704	1394 aa	Known RBP	40.28	■■■■■ 4.04
PPP1R35-204	ENST00000487452	RBM33	Q96EV2	1170 aa	Known RBP	40.27	■■■■■ 4.04
PPP1R35-204	ENST00000487452	TONSL	Q96HA7	1378 aa		40.26	■■■■■ 4.04
PPP1R35-204	ENST00000487452	ABCC11	Q96J66	1382 aa		40.25	■■■■■ 4.03
PPP1R35-204	ENST00000487452	MSH6	P52701	1360 aa		40.24	■■■■■ 4.03
PPP1R35-204	ENST00000487452	PIP4K2B	P78356	416 aa		40.24	■■■■■ 4.03
PPP1R35-204	ENST00000487452	C14orf37	Q86TY3	774 aa		40.24	■■■■■ 4.03
PPP1R35-204	ENST00000487452	YTHDC2	Q9H6S0	1430 aa	Known RBP	40.23	■■■■■ 4.03
PPP1R35-204	ENST00000487452	ASXL1	Q8IXJ9	1541 aa		40.22	■■■■■ 4.03
PPP1R35-204	ENST00000487452	SCAF1	Q9H7N4	1312 aa	Known RBP	40.22	■■■■■ 4.03
PPP1R35-204	ENST00000487452	XIRP1	Q702N8	1843 aa	Known RBP	40.22	■■■■■ 4.03
PPP1R35-204	ENST00000487452	CCER1	Q8TC90	406 aa	Predicted RBP	40.22	■■■■■ 4.03
PPP1R35-204	ENST00000487452	STK26	Q9P289	416 aa		40.22	■■■■■ 4.03
PPP1R35-204	ENST00000487452	TECPR2	O15040	1411 aa		40.22	■■■■■ 4.03
PPP1R35-204	ENST00000487452	C19orf44	Q9H6X5	657 aa		40.2	■■■■■ 4.03
PPP1R35-204	ENST00000487452	ROBO2	Q9HCK4	1378 aa		40.2	■■■■■ 4.03
PPP1R35-204	ENST00000487452	SIRT1	Q96EB6	747 aa		40.18	■■■■■ 4.02
PPP1R35-204	ENST00000487452	ADGRB1	O14514	1584 aa		40.14	■■■■■ 4.02
PPP1R35-204	ENST00000487452	KIAA1210	Q9ULL0	1709 aa		40.11	■■■■■ 4.01
PPP1R35-204	ENST00000487452	FAM135B	Q49AJ0	1406 aa		40.1	■■■■■ 4.01
PPP1R35-204	ENST00000487452	CADPS2	Q86UW7	1296 aa		40.1	■■■■■ 4.01
PPP1R35-204	ENST00000487452	TIMELESS	Q9UNS1	1208 aa		40.1	■■■■■ 4.01
PPP1R35-204	ENST00000487452	KNDC1	Q76NI1	1749 aa		40.09	■■■■■ 4.01
PPP1R35-204	ENST00000487452	ATF3	P18847	181 aa		40.09	■■■■■ 4.01
PPP1R35-204	ENST00000487452	ADGRL3	Q9HAR2	1447 aa		40.08	■■■■■ 4.01
PPP1R35-204	ENST00000487452	DCC	P43146	1447 aa		40.08	■■■■■ 4.01
PPP1R35-204	ENST00000487452	DLC1	Q96QB1	1528 aa		40.05	■■■■■ 4
PPP1R35-204	ENST00000487452	WAPL	Q7Z5K2	1190 aa		40.04	■■■■■ 4
PPP1R35-204	ENST00000487452	TRAK1	Q9UPV9	953 aa		40.03	■■■■■ 4
PPP1R35-204	ENST00000487452	HSPA1L	P34931	641 aa		40.02	■■■■■ 4
PPP1R35-204	ENST00000487452	NBPF1	Q3BBV0	1214 aa		40.02	■■■■■ 4
PPP1R35-204	ENST00000487452	SLAIN2	Q9P270	581 aa		40.01	■■■■■ 4
PPP1R35-204	ENST00000487452	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	39.99	■■■■□ 3.99

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms