RNA–Protein interactions for RNA: ENST00000487451.1

TFE3-203, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 3

Gene TFE3, Length 1,058 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-203ENST00000487451 ZFYVE9O95405 1425 aa25.64■■□□□ 1.7
TFE3-203ENST00000487451 SLC52A1Q9NWF4 448 aa25.62■■□□□ 1.69
TFE3-203ENST00000487451 KCNA6P17658 529 aa25.61■■□□□ 1.69
TFE3-203ENST00000487451 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
TFE3-203ENST00000487451 IQGAP3Q86VI3 1631 aa25.6■■□□□ 1.69
TFE3-203ENST00000487451 CHD2O14647 1828 aaKnown RBP25.59■■□□□ 1.69
TFE3-203ENST00000487451 NKTRP30414 1462 aaKnown RBP25.59■■□□□ 1.69
TFE3-203ENST00000487451 RIMS2Q9UQ26 1411 aa25.58■■□□□ 1.69
TFE3-203ENST00000487451 PHF23Q9BUL5 403 aaPredicted RBP25.58■■□□□ 1.69
TFE3-203ENST00000487451 FAM135BQ49AJ0 1406 aa25.56■■□□□ 1.68
TFE3-203ENST00000487451 PROSER2Q86WR7 435 aaPredicted RBP25.55■■□□□ 1.68
TFE3-203ENST00000487451 ROCK1Q13464 1354 aa25.55■■□□□ 1.68
TFE3-203ENST00000487451 PLEKHG1Q9ULL1 1385 aa25.55■■□□□ 1.68
TFE3-203ENST00000487451 BCANQ96GW7 911 aa25.53■■□□□ 1.68
TFE3-203ENST00000487451 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
TFE3-203ENST00000487451 NUTM2DQ5VT03 806 aaPredicted RBP25.49■■□□□ 1.67
TFE3-203ENST00000487451 RGS17Q9UGC6 210 aaPredicted RBP25.49■■□□□ 1.67
TFE3-203ENST00000487451 CHGAP10645 457 aaKnown RBP25.48■■□□□ 1.67
TFE3-203ENST00000487451 ITGAEP38570 1179 aa25.48■■□□□ 1.67
TFE3-203ENST00000487451 ADAMTS13Q76LX8 1427 aa25.47■■□□□ 1.67
TFE3-203ENST00000487451 PPP1R15AO75807 674 aaPredicted RBP25.47■■□□□ 1.67
TFE3-203ENST00000487451 PHLPP1O60346 1717 aa25.45■■□□□ 1.66
TFE3-203ENST00000487451 NUP155O75694 1391 aa25.44■■□□□ 1.66
TFE3-203ENST00000487451 MSH6P52701 1360 aa25.44■■□□□ 1.66
TFE3-203ENST00000487451 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
TFE3-203ENST00000487451 DIP2AQ14689 1571 aa25.43■■□□□ 1.66
TFE3-203ENST00000487451 TBX22Q9Y458 520 aa25.4■■□□□ 1.66
TFE3-203ENST00000487451 NRXN3Q9Y4C0 1643 aa25.4■■□□□ 1.66
TFE3-203ENST00000487451 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.4■■□□□ 1.66
TFE3-203ENST00000487451 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.38■■□□□ 1.65
TFE3-203ENST00000487451 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
TFE3-203ENST00000487451 HDGFP51858 240 aaKnown RBP25.37■■□□□ 1.65
TFE3-203ENST00000487451 SLAIN2Q9P270 581 aa25.37■■□□□ 1.65
TFE3-203ENST00000487451 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
TFE3-203ENST00000487451 TRPM2O94759 1503 aa25.36■■□□□ 1.65
TFE3-203ENST00000487451 CLTCL1P53675 1640 aa25.33■■□□□ 1.65
TFE3-203ENST00000487451 XRN1Q8IZH2 1706 aaKnown RBP25.32■■□□□ 1.64
TFE3-203ENST00000487451 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
TFE3-203ENST00000487451 POTEAQ6S8J7 498 aa25.32■■□□□ 1.64
TFE3-203ENST00000487451 SETBP1Q9Y6X0 1596 aa25.31■■□□□ 1.64
TFE3-203ENST00000487451 PIK3R4Q99570 1358 aa25.31■■□□□ 1.64
TFE3-203ENST00000487451 C14orf37Q86TY3 774 aa25.28■■□□□ 1.64
TFE3-203ENST00000487451 RRBP1Q9P2E9 1410 aaKnown RBP25.28■■□□□ 1.64
TFE3-203ENST00000487451 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
TFE3-203ENST00000487451 JCADQ9P266 1359 aa25.27■■□□□ 1.64
TFE3-203ENST00000487451 AHDC1Q5TGY3 1603 aaPredicted RBP25.26■■□□□ 1.63
TFE3-203ENST00000487451 SETD1AO15047 1707 aaKnown RBP25.26■■□□□ 1.63
TFE3-203ENST00000487451 NEXMIFQ5QGS0 1516 aa25.26■■□□□ 1.63
TFE3-203ENST00000487451 LRP6O75581 1613 aa25.26■■□□□ 1.63
TFE3-203ENST00000487451 NAIPQ13075 1403 aa25.24■■□□□ 1.63
TFE3-203ENST00000487451 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
TFE3-203ENST00000487451 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
TFE3-203ENST00000487451 METP08581 1390 aa25.22■■□□□ 1.63
TFE3-203ENST00000487451 KIF1BO60333 1816 aa25.22■■□□□ 1.63
TFE3-203ENST00000487451 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
TFE3-203ENST00000487451 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
TFE3-203ENST00000487451 ATF3P18847 181 aa25.19■■□□□ 1.62
TFE3-203ENST00000487451 NALCNQ8IZF0 1738 aa25.19■■□□□ 1.62
TFE3-203ENST00000487451 ASXL1Q8IXJ9 1541 aa25.17■■□□□ 1.62
TFE3-203ENST00000487451 DCCP43146 1447 aa25.16■■□□□ 1.62
TFE3-203ENST00000487451 BRINP3Q76B58 766 aa25.16■■□□□ 1.62
TFE3-203ENST00000487451 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
TFE3-203ENST00000487451 MST1RQ04912 1400 aa25.15■■□□□ 1.62
TFE3-203ENST00000487451 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
TFE3-203ENST00000487451 HFM1A2PYH4 1435 aa25.1■■□□□ 1.61
TFE3-203ENST00000487451 ADGRL3Q9HAR2 1447 aa25.1■■□□□ 1.61
TFE3-203ENST00000487451 PPLO60437 1756 aa25.08■■□□□ 1.6
TFE3-203ENST00000487451 MEX3CQ5U5Q3 659 aaKnown RBP25.05■■□□□ 1.6
TFE3-203ENST00000487451 DDX17Q92841 729 aaKnown RBP25.05■■□□□ 1.6
TFE3-203ENST00000487451 TRIM52Q96A61 297 aa25.04■■□□□ 1.6
TFE3-203ENST00000487451 SETD5Q9C0A6 1442 aa25.03■■□□□ 1.6
TFE3-203ENST00000487451 NUTM2BA6NNL0 878 aaPredicted RBP25.01■■□□□ 1.59
TFE3-203ENST00000487451 NUTM2EB1AL46 878 aaPredicted RBP25.01■■□□□ 1.59
TFE3-203ENST00000487451 NUTM2AQ8IVF1 878 aaPredicted RBP25.01■■□□□ 1.59
TFE3-203ENST00000487451 ROBO2Q9HCK4 1378 aa25.01■■□□□ 1.59
TFE3-203ENST00000487451 PTCH1Q13635 1447 aa25.01■■□□□ 1.59
TFE3-203ENST00000487451 SLC4A1APQ9BWU0 796 aaKnown RBP24.99■■□□□ 1.59
TFE3-203ENST00000487451 C1orf167Q5SNV9 1468 aa24.98■■□□□ 1.59
TFE3-203ENST00000487451 FOXD1Q16676 465 aa24.98■■□□□ 1.59
TFE3-203ENST00000487451 LAMC1P11047 1609 aa24.97■■□□□ 1.59
TFE3-203ENST00000487451 ZNF772Q68DY9 489 aaPredicted RBP24.96■■□□□ 1.59
TFE3-203ENST00000487451 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.59
TFE3-203ENST00000487451 PNPLA6Q8IY17 1366 aa24.95■■□□□ 1.59
TFE3-203ENST00000487451 VGFO15240 615 aaPredicted RBP24.95■■□□□ 1.58
TFE3-203ENST00000487451 IFT172Q9UG01 1749 aa24.95■■□□□ 1.58
TFE3-203ENST00000487451 AFF2P51816 1311 aa24.91■■□□□ 1.58
TFE3-203ENST00000487451 RPGRIP1LQ68CZ1 1315 aa24.91■■□□□ 1.58
TFE3-203ENST00000487451 LRRC59Q96AG4 307 aaKnown RBP24.91■■□□□ 1.58
TFE3-203ENST00000487451 ORAI2Q96SN7 254 aa24.9■■□□□ 1.58
TFE3-203ENST00000487451 ADGRF5Q8IZF2 1346 aa24.87■■□□□ 1.57
TFE3-203ENST00000487451 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
TFE3-203ENST00000487451 RXRBP28702 533 aa24.86■■□□□ 1.57
TFE3-203ENST00000487451 C8orf37Q96NL8 207 aa24.86■■□□□ 1.57
TFE3-203ENST00000487451 CDC42BPGQ6DT37 1551 aa24.85■■□□□ 1.57
TFE3-203ENST00000487451 UPF1Q92900 1129 aaKnown RBP eCLIP24.85■■□□□ 1.57
TFE3-203ENST00000487451 CCDC144AA2RUR9 1427 aa24.85■■□□□ 1.57
TFE3-203ENST00000487451 CDK12Q9NYV4 1490 aaPredicted RBP24.84■■□□□ 1.57
TFE3-203ENST00000487451 SOS2Q07890 1332 aaPredicted RBP24.84■■□□□ 1.57
TFE3-203ENST00000487451 RGS12O14924 1447 aa24.82■■□□□ 1.56
TFE3-203ENST00000487451 KNDC1Q76NI1 1749 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms