RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 RIMS2Q9UQ26 1411 aa34.08■■■■□ 3.05
SRM-205ENST00000487300 TOM1O60784 492 aa34.07■■■■□ 3.04
SRM-205ENST00000487300 PLEKHG1Q9ULL1 1385 aa34.07■■■■□ 3.04
SRM-205ENST00000487300 NKTRP30414 1462 aaKnown RBP34.03■■■■□ 3.04
SRM-205ENST00000487300 TRPM2O94759 1503 aa34.02■■■■□ 3.04
SRM-205ENST00000487300 DIP2AQ14689 1571 aa34.01■■■■□ 3.03
SRM-205ENST00000487300 CLTCL1P53675 1640 aa34.01■■■■□ 3.03
SRM-205ENST00000487300 SLC26A8Q96RN1 970 aa33.98■■■■□ 3.03
SRM-205ENST00000487300 KCNA6P17658 529 aa33.96■■■■□ 3.03
SRM-205ENST00000487300 KIF1BO60333 1816 aa33.95■■■■□ 3.03
SRM-205ENST00000487300 NRXN3Q9Y4C0 1643 aa33.94■■■■□ 3.02
SRM-205ENST00000487300 PIP4K2BP78356 416 aa33.93■■■■□ 3.02
SRM-205ENST00000487300 ADAMTS13Q76LX8 1427 aa33.93■■■■□ 3.02
SRM-205ENST00000487300 HDGFP51858 240 aaKnown RBP33.92■■■■□ 3.02
SRM-205ENST00000487300 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.91■■■■□ 3.02
SRM-205ENST00000487300 TMEM94Q12767 1356 aa33.9■■■■□ 3.02
SRM-205ENST00000487300 HSPA1LP34931 641 aa33.89■■■■□ 3.02
SRM-205ENST00000487300 SETBP1Q9Y6X0 1596 aa33.89■■■■□ 3.02
SRM-205ENST00000487300 SCAF1Q9H7N4 1312 aaKnown RBP33.88■■■■□ 3.01
SRM-205ENST00000487300 DISP3Q9P2K9 1392 aa33.87■■■■□ 3.01
SRM-205ENST00000487300 PPP1R15AO75807 674 aaPredicted RBP33.87■■■■□ 3.01
SRM-205ENST00000487300 CHGAP10645 457 aaKnown RBP33.87■■■■□ 3.01
SRM-205ENST00000487300 NEXMIFQ5QGS0 1516 aa33.86■■■■□ 3.01
SRM-205ENST00000487300 TBX22Q9Y458 520 aa33.85■■■■□ 3.01
SRM-205ENST00000487300 PIK3R4Q99570 1358 aa33.83■■■■□ 3.01
SRM-205ENST00000487300 XRN1Q8IZH2 1706 aaKnown RBP33.81■■■■□ 3
SRM-205ENST00000487300 MED1Q15648 1581 aaPredicted RBP33.81■■■■□ 3
SRM-205ENST00000487300 BCANQ96GW7 911 aa33.79■■■■□ 3
SRM-205ENST00000487300 ROBO1Q9Y6N7 1651 aa33.78■■■■□ 3
SRM-205ENST00000487300 PROSER2Q86WR7 435 aaPredicted RBP33.77■■■■□ 3
SRM-205ENST00000487300 NUTM2DQ5VT03 806 aaPredicted RBP33.76■■■□□ 2.99
SRM-205ENST00000487300 SENP3Q9H4L4 574 aaPredicted RBP33.75■■■□□ 2.99
SRM-205ENST00000487300 FAM135BQ49AJ0 1406 aa33.75■■■□□ 2.99
SRM-205ENST00000487300 NCOA3Q9Y6Q9 1424 aa33.75■■■□□ 2.99
SRM-205ENST00000487300 SETD1AO15047 1707 aaKnown RBP33.74■■■□□ 2.99
SRM-205ENST00000487300 PPLO60437 1756 aa33.73■■■□□ 2.99
SRM-205ENST00000487300 PTPRUQ92729 1446 aa33.71■■■□□ 2.99
SRM-205ENST00000487300 TRIM52Q96A61 297 aa33.71■■■□□ 2.99
SRM-205ENST00000487300 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.7■■■□□ 2.99
SRM-205ENST00000487300 RBM33Q96EV2 1170 aaKnown RBP33.7■■■□□ 2.99
SRM-205ENST00000487300 MSH6P52701 1360 aa33.69■■■□□ 2.98
SRM-205ENST00000487300 SLC4A1APQ9BWU0 796 aaKnown RBP33.68■■■□□ 2.98
SRM-205ENST00000487300 ILDR2Q71H61 639 aa33.66■■■□□ 2.98
SRM-205ENST00000487300 IFT172Q9UG01 1749 aa33.64■■■□□ 2.98
SRM-205ENST00000487300 ZNF326Q5BKZ1 582 aaKnown RBP33.63■■■□□ 2.97
SRM-205ENST00000487300 METP08581 1390 aa33.58■■■□□ 2.97
SRM-205ENST00000487300 PHLPP1O60346 1717 aa33.57■■■□□ 2.96
SRM-205ENST00000487300 AMOTL2Q9Y2J4 779 aa33.56■■■□□ 2.96
SRM-205ENST00000487300 NALCNQ8IZF0 1738 aa33.55■■■□□ 2.96
SRM-205ENST00000487300 DCCP43146 1447 aa33.53■■■□□ 2.96
SRM-205ENST00000487300 SETD5Q9C0A6 1442 aa33.53■■■□□ 2.96
SRM-205ENST00000487300 PRAG1Q86YV5 1406 aa33.53■■■□□ 2.96
SRM-205ENST00000487300 RPGRIP1LQ68CZ1 1315 aa33.53■■■□□ 2.96
SRM-205ENST00000487300 SLAIN2Q9P270 581 aa33.52■■■□□ 2.96
SRM-205ENST00000487300 SPATA31E1Q6ZUB1 1445 aa33.52■■■□□ 2.96
SRM-205ENST00000487300 ACIN1Q9UKV3 1341 aaKnown RBP33.52■■■□□ 2.96
SRM-205ENST00000487300 COL16A1Q07092 1604 aaPredicted RBP33.51■■■□□ 2.96
SRM-205ENST00000487300 MPHOSPH9Q99550 1183 aa33.51■■■□□ 2.95
SRM-205ENST00000487300 CCDC144AA2RUR9 1427 aa33.51■■■□□ 2.95
SRM-205ENST00000487300 FOXD1Q16676 465 aa33.5■■■□□ 2.95
SRM-205ENST00000487300 C19orf44Q9H6X5 657 aa33.48■■■□□ 2.95
SRM-205ENST00000487300 AHDC1Q5TGY3 1603 aaPredicted RBP33.48■■■□□ 2.95
SRM-205ENST00000487300 VGFO15240 615 aaPredicted RBP33.47■■■□□ 2.95
SRM-205ENST00000487300 PTCH1Q13635 1447 aa33.45■■■□□ 2.95
SRM-205ENST00000487300 CADPS2Q86UW7 1296 aa33.44■■■□□ 2.94
SRM-205ENST00000487300 ADGRL3Q9HAR2 1447 aa33.43■■■□□ 2.94
SRM-205ENST00000487300 RAB3GAP2Q9H2M9 1393 aa33.42■■■□□ 2.94
SRM-205ENST00000487300 C14orf37Q86TY3 774 aa33.41■■■□□ 2.94
SRM-205ENST00000487300 NHSL1Q5SYE7 1610 aa33.39■■■□□ 2.94
SRM-205ENST00000487300 SOCS7O14512 581 aa33.39■■■□□ 2.94
SRM-205ENST00000487300 MST1RQ04912 1400 aa33.37■■■□□ 2.93
SRM-205ENST00000487300 ATF3P18847 181 aa33.37■■■□□ 2.93
SRM-205ENST00000487300 SHPRHQ149N8 1683 aa33.36■■■□□ 2.93
SRM-205ENST00000487300 KNDC1Q76NI1 1749 aa33.36■■■□□ 2.93
SRM-205ENST00000487300 ASXL1Q8IXJ9 1541 aa33.34■■■□□ 2.93
SRM-205ENST00000487300 ANKRD30BQ9BXX2 1392 aa33.34■■■□□ 2.93
SRM-205ENST00000487300 ROBO2Q9HCK4 1378 aa33.32■■■□□ 2.92
SRM-205ENST00000487300 PIK3C2GO75747 1445 aa33.31■■■□□ 2.92
SRM-205ENST00000487300 LAMC1P11047 1609 aa33.31■■■□□ 2.92
SRM-205ENST00000487300 JCADQ9P266 1359 aa33.3■■■□□ 2.92
SRM-205ENST00000487300 ADGRF5Q8IZF2 1346 aa33.29■■■□□ 2.92
SRM-205ENST00000487300 NRXN1Q9ULB1 1477 aa33.28■■■□□ 2.92
SRM-205ENST00000487300 BRINP3Q76B58 766 aa33.27■■■□□ 2.92
SRM-205ENST00000487300 PHF23Q9BUL5 403 aaPredicted RBP33.27■■■□□ 2.92
SRM-205ENST00000487300 TECPR2O15040 1411 aa33.27■■■□□ 2.92
SRM-205ENST00000487300 MYOM2P54296 1465 aa33.26■■■□□ 2.92
SRM-205ENST00000487300 CDC42BPGQ6DT37 1551 aa33.24■■■□□ 2.91
SRM-205ENST00000487300 RGL3Q3MIN7 710 aa33.23■■■□□ 2.91
SRM-205ENST00000487300 RGS17Q9UGC6 210 aaPredicted RBP33.21■■■□□ 2.91
SRM-205ENST00000487300 HRCP23327 699 aa33.19■■■□□ 2.9
SRM-205ENST00000487300 C1orf167Q5SNV9 1468 aa33.18■■■□□ 2.9
SRM-205ENST00000487300 LRP6O75581 1613 aa33.18■■■□□ 2.9
SRM-205ENST00000487300 LRPPRCP42704 1394 aaKnown RBP33.16■■■□□ 2.9
SRM-205ENST00000487300 ABCC11Q96J66 1382 aa33.13■■■□□ 2.89
SRM-205ENST00000487300 SPATA31A6Q5VVP1 1343 aa33.13■■■□□ 2.89
SRM-205ENST00000487300 YTHDC2Q9H6S0 1430 aaKnown RBP33.1■■■□□ 2.89
SRM-205ENST00000487300 FMN2Q9NZ56 1722 aa33.09■■■□□ 2.89
SRM-205ENST00000487300 C14orf93Q9H972 538 aaKnown RBP33.05■■■□□ 2.88
SRM-205ENST00000487300 ADGRB1O14514 1584 aa33.04■■■□□ 2.88
SRM-205ENST00000487300 TMEM132EQ6IEE7 984 aa33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms