RNA–Protein interactions for RNA: ENST00000487297.5

SETD4-217, Transcript of SET domain containing 4, humanhuman

TSL 2

Gene SETD4, Length 3,358 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD4-217ENST00000487297 NBPF1Q3BBV0 1214 aa13.27□□□□□ -0.28
SETD4-217ENST00000487297 COL17A1Q9UMD9 1497 aaPredicted RBP13.27□□□□□ -0.28
SETD4-217ENST00000487297 EIF3AQ14152 1382 aaKnown RBP13.27□□□□□ -0.29
SETD4-217ENST00000487297 GOLGA6L3A6NEY3 463 aa13.27□□□□□ -0.29
SETD4-217ENST00000487297 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
SETD4-217ENST00000487297 TBC1D2Q9BYX2 928 aa13.26□□□□□ -0.29
SETD4-217ENST00000487297 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
SETD4-217ENST00000487297 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
SETD4-217ENST00000487297 PANK3Q9H999 370 aa13.26□□□□□ -0.29
SETD4-217ENST00000487297 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
SETD4-217ENST00000487297 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
SETD4-217ENST00000487297 TESK2Q96S53 571 aa13.24□□□□□ -0.29
SETD4-217ENST00000487297 SLFN5Q08AF3 891 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 MCM4P33991 863 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 EFCAB2Q5VUJ9 269 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 PRAG1Q86YV5 1406 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 BECN1Q14457 450 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
SETD4-217ENST00000487297 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
SETD4-217ENST00000487297 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
SETD4-217ENST00000487297 NPM1P06748 294 aaKnown RBP eCLIP13.21□□□□□ -0.29
SETD4-217ENST00000487297 TBC1D32Q96NH3 1257 aa13.21□□□□□ -0.29
SETD4-217ENST00000487297 KIF3BO15066 747 aa13.21□□□□□ -0.3
SETD4-217ENST00000487297 PRDM15P57071 1507 aaPredicted RBP13.2□□□□□ -0.3
SETD4-217ENST00000487297 MAGI2Q86UL8 1455 aa13.2□□□□□ -0.3
SETD4-217ENST00000487297 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
SETD4-217ENST00000487297 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
SETD4-217ENST00000487297 NUTM2DQ5VT03 806 aaPredicted RBP13.2□□□□□ -0.3
SETD4-217ENST00000487297 ESPNB1AK53 854 aa13.19□□□□□ -0.3
SETD4-217ENST00000487297 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
SETD4-217ENST00000487297 CDC42BPAQ5VT25 1732 aa13.19□□□□□ -0.3
SETD4-217ENST00000487297 GGT6Q6P531 493 aa13.19□□□□□ -0.3
SETD4-217ENST00000487297 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
SETD4-217ENST00000487297 TRAK2O60296 914 aa13.18□□□□□ -0.3
SETD4-217ENST00000487297 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
SETD4-217ENST00000487297 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
SETD4-217ENST00000487297 ITSN2Q9NZM3 1697 aa13.18□□□□□ -0.3
SETD4-217ENST00000487297 SPAG9O60271 1321 aaKnown RBP13.18□□□□□ -0.3
SETD4-217ENST00000487297 PANK1Q8TE04 598 aa13.18□□□□□ -0.3
SETD4-217ENST00000487297 GRPEL1Q9HAV7 217 aa13.17□□□□□ -0.3
SETD4-217ENST00000487297 ERBINQ96RT1 1412 aa13.17□□□□□ -0.3
SETD4-217ENST00000487297 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
SETD4-217ENST00000487297 MYO5CQ9NQX4 1742 aa13.17□□□□□ -0.3
SETD4-217ENST00000487297 GAS2L3Q86XJ1 694 aa13.17□□□□□ -0.3
SETD4-217ENST00000487297 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
SETD4-217ENST00000487297 GPRASP1Q5JY77 1395 aa13.16□□□□□ -0.3
SETD4-217ENST00000487297 MRE11P49959 708 aa13.16□□□□□ -0.3
SETD4-217ENST00000487297 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
SETD4-217ENST00000487297 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
SETD4-217ENST00000487297 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
SETD4-217ENST00000487297 LAMC1P11047 1609 aa13.15□□□□□ -0.3
SETD4-217ENST00000487297 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
SETD4-217ENST00000487297 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
SETD4-217ENST00000487297 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
SETD4-217ENST00000487297 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
SETD4-217ENST00000487297 A2MP01023 1474 aa13.14□□□□□ -0.31
SETD4-217ENST00000487297 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
SETD4-217ENST00000487297 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
SETD4-217ENST00000487297 PRDM4Q9UKN5 801 aa13.14□□□□□ -0.31
SETD4-217ENST00000487297 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
SETD4-217ENST00000487297 MYH16Q9H6N6 1097 aa13.13□□□□□ -0.31
SETD4-217ENST00000487297 APAF1O14727 1248 aa13.13□□□□□ -0.31
SETD4-217ENST00000487297 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
SETD4-217ENST00000487297 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
SETD4-217ENST00000487297 OSCARQ8IYS5 282 aa13.12□□□□□ -0.31
SETD4-217ENST00000487297 RLBP1P12271 317 aa13.11□□□□□ -0.31
SETD4-217ENST00000487297 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
SETD4-217ENST00000487297 PDZRN3Q9UPQ7 1066 aa13.11□□□□□ -0.31
SETD4-217ENST00000487297 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
SETD4-217ENST00000487297 PLA2R1Q13018 1463 aa13.11□□□□□ -0.31
SETD4-217ENST00000487297 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
SETD4-217ENST00000487297 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
SETD4-217ENST00000487297 ABCC2Q92887 1545 aa13.1□□□□□ -0.31
SETD4-217ENST00000487297 FAM135AQ9P2D6 1515 aa13.1□□□□□ -0.31
SETD4-217ENST00000487297 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
SETD4-217ENST00000487297 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
SETD4-217ENST00000487297 CHMP5Q9NZZ3 219 aa13.1□□□□□ -0.31
SETD4-217ENST00000487297 ABCA8O94911 1581 aa13.1□□□□□ -0.31
SETD4-217ENST00000487297 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 CHD1O14646 1710 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 MYOM1P52179 1685 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 DDIT3P35638 169 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 RAPGEF3O95398 923 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 RIPK4P57078 832 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
SETD4-217ENST00000487297 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.31
SETD4-217ENST00000487297 TRAPPC8Q9Y2L5 1435 aa13.08□□□□□ -0.31
SETD4-217ENST00000487297 RNF17Q9BXT8 1623 aaKnown RBP13.08□□□□□ -0.32
SETD4-217ENST00000487297 TPM2P07951 284 aa13.08□□□□□ -0.32
SETD4-217ENST00000487297 SAFB2Q14151 953 aaKnown RBP eCLIP13.08□□□□□ -0.32
SETD4-217ENST00000487297 CCDC141Q6ZP82 1450 aa13.08□□□□□ -0.32
SETD4-217ENST00000487297 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
SETD4-217ENST00000487297 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
SETD4-217ENST00000487297 TMF1P82094 1093 aa13.07□□□□□ -0.32
SETD4-217ENST00000487297 UPF2Q9HAU5 1272 aaKnown RBP13.07□□□□□ -0.32
SETD4-217ENST00000487297 RBM10P98175 930 aaKnown RBP13.06□□□□□ -0.32
SETD4-217ENST00000487297 E9PSI1 815 aa13.06□□□□□ -0.32
SETD4-217ENST00000487297 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms