RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 KCNA6P17658 529 aa28.88■■■□□ 2.21
CLIP2-206ENST00000487091 SCAF1Q9H7N4 1312 aaKnown RBP28.88■■■□□ 2.21
CLIP2-206ENST00000487091 PLEKHG1Q9ULL1 1385 aa28.87■■■□□ 2.21
CLIP2-206ENST00000487091 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.86■■■□□ 2.21
CLIP2-206ENST00000487091 ALKQ9UM73 1620 aa28.86■■■□□ 2.21
CLIP2-206ENST00000487091 BCANQ96GW7 911 aa28.85■■■□□ 2.21
CLIP2-206ENST00000487091 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
CLIP2-206ENST00000487091 HFM1A2PYH4 1435 aa28.84■■■□□ 2.21
CLIP2-206ENST00000487091 SPHKAPQ2M3C7 1700 aa28.8■■■□□ 2.2
CLIP2-206ENST00000487091 HSPA1LP34931 641 aa28.8■■■□□ 2.2
CLIP2-206ENST00000487091 XIRP1Q702N8 1843 aaKnown RBP28.8■■■□□ 2.2
CLIP2-206ENST00000487091 DISP3Q9P2K9 1392 aa28.79■■■□□ 2.2
CLIP2-206ENST00000487091 TBX22Q9Y458 520 aa28.78■■■□□ 2.2
CLIP2-206ENST00000487091 NWD1Q149M9 1564 aa28.76■■■□□ 2.19
CLIP2-206ENST00000487091 PROSER2Q86WR7 435 aaPredicted RBP28.76■■■□□ 2.19
CLIP2-206ENST00000487091 TMEM94Q12767 1356 aa28.75■■■□□ 2.19
CLIP2-206ENST00000487091 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
CLIP2-206ENST00000487091 TRIM52Q96A61 297 aa28.73■■■□□ 2.19
CLIP2-206ENST00000487091 CHD2O14647 1828 aaKnown RBP28.72■■■□□ 2.19
CLIP2-206ENST00000487091 NUTM2DQ5VT03 806 aaPredicted RBP28.72■■■□□ 2.19
CLIP2-206ENST00000487091 SENP3Q9H4L4 574 aaPredicted RBP28.72■■■□□ 2.19
CLIP2-206ENST00000487091 ADAMTS13Q76LX8 1427 aa28.7■■■□□ 2.19
CLIP2-206ENST00000487091 TRPM2O94759 1503 aa28.69■■■□□ 2.18
CLIP2-206ENST00000487091 DIP2AQ14689 1571 aa28.69■■■□□ 2.18
CLIP2-206ENST00000487091 PIK3R4Q99570 1358 aa28.67■■■□□ 2.18
CLIP2-206ENST00000487091 CLTCL1P53675 1640 aa28.65■■■□□ 2.18
CLIP2-206ENST00000487091 ZNF326Q5BKZ1 582 aaKnown RBP28.65■■■□□ 2.18
CLIP2-206ENST00000487091 RBM33Q96EV2 1170 aaKnown RBP28.65■■■□□ 2.18
CLIP2-206ENST00000487091 SLC4A1APQ9BWU0 796 aaKnown RBP28.65■■■□□ 2.18
CLIP2-206ENST00000487091 FAM135BQ49AJ0 1406 aa28.62■■■□□ 2.17
CLIP2-206ENST00000487091 NCOA3Q9Y6Q9 1424 aa28.61■■■□□ 2.17
CLIP2-206ENST00000487091 KIF1BO60333 1816 aa28.61■■■□□ 2.17
CLIP2-206ENST00000487091 MSH6P52701 1360 aa28.61■■■□□ 2.17
CLIP2-206ENST00000487091 SETBP1Q9Y6X0 1596 aa28.58■■■□□ 2.17
CLIP2-206ENST00000487091 ILDR2Q71H61 639 aa28.58■■■□□ 2.17
CLIP2-206ENST00000487091 NEXMIFQ5QGS0 1516 aa28.56■■■□□ 2.16
CLIP2-206ENST00000487091 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
CLIP2-206ENST00000487091 AMOTL2Q9Y2J4 779 aa28.55■■■□□ 2.16
CLIP2-206ENST00000487091 ACIN1Q9UKV3 1341 aaKnown RBP28.53■■■□□ 2.16
CLIP2-206ENST00000487091 MED1Q15648 1581 aaPredicted RBP28.53■■■□□ 2.16
CLIP2-206ENST00000487091 PTPRUQ92729 1446 aa28.52■■■□□ 2.16
CLIP2-206ENST00000487091 SLAIN2Q9P270 581 aa28.51■■■□□ 2.15
CLIP2-206ENST00000487091 RPGRIP1LQ68CZ1 1315 aa28.5■■■□□ 2.15
CLIP2-206ENST00000487091 ROBO1Q9Y6N7 1651 aa28.49■■■□□ 2.15
CLIP2-206ENST00000487091 VGFO15240 615 aaPredicted RBP28.49■■■□□ 2.15
CLIP2-206ENST00000487091 MPHOSPH9Q99550 1183 aa28.49■■■□□ 2.15
CLIP2-206ENST00000487091 C14orf37Q86TY3 774 aa28.48■■■□□ 2.15
CLIP2-206ENST00000487091 C19orf44Q9H6X5 657 aa28.48■■■□□ 2.15
CLIP2-206ENST00000487091 FOXD1Q16676 465 aa28.47■■■□□ 2.15
CLIP2-206ENST00000487091 METP08581 1390 aa28.47■■■□□ 2.15
CLIP2-206ENST00000487091 SETD5Q9C0A6 1442 aa28.45■■■□□ 2.15
CLIP2-206ENST00000487091 CADPS2Q86UW7 1296 aa28.45■■■□□ 2.14
CLIP2-206ENST00000487091 XRN1Q8IZH2 1706 aaKnown RBP28.45■■■□□ 2.14
CLIP2-206ENST00000487091 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.43■■■□□ 2.14
CLIP2-206ENST00000487091 ATF3P18847 181 aa28.42■■■□□ 2.14
CLIP2-206ENST00000487091 CCDC144AA2RUR9 1427 aa28.41■■■□□ 2.14
CLIP2-206ENST00000487091 PPLO60437 1756 aa28.38■■■□□ 2.13
CLIP2-206ENST00000487091 SOCS7O14512 581 aa28.38■■■□□ 2.13
CLIP2-206ENST00000487091 DCCP43146 1447 aa28.36■■■□□ 2.13
CLIP2-206ENST00000487091 PHF23Q9BUL5 403 aaPredicted RBP28.35■■■□□ 2.13
CLIP2-206ENST00000487091 SPATA31E1Q6ZUB1 1445 aa28.34■■■□□ 2.13
CLIP2-206ENST00000487091 SETD1AO15047 1707 aaKnown RBP28.33■■■□□ 2.13
CLIP2-206ENST00000487091 RAB3GAP2Q9H2M9 1393 aa28.32■■■□□ 2.12
CLIP2-206ENST00000487091 PHLPP1O60346 1717 aa28.32■■■□□ 2.12
CLIP2-206ENST00000487091 RGL3Q3MIN7 710 aa28.3■■■□□ 2.12
CLIP2-206ENST00000487091 ANKRD30BQ9BXX2 1392 aa28.29■■■□□ 2.12
CLIP2-206ENST00000487091 PTCH1Q13635 1447 aa28.28■■■□□ 2.12
CLIP2-206ENST00000487091 ADGRL3Q9HAR2 1447 aa28.28■■■□□ 2.12
CLIP2-206ENST00000487091 PRAG1Q86YV5 1406 aa28.27■■■□□ 2.12
CLIP2-206ENST00000487091 JCADQ9P266 1359 aa28.26■■■□□ 2.12
CLIP2-206ENST00000487091 ADGRF5Q8IZF2 1346 aa28.26■■■□□ 2.11
CLIP2-206ENST00000487091 BRINP3Q76B58 766 aa28.25■■■□□ 2.11
CLIP2-206ENST00000487091 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
CLIP2-206ENST00000487091 AHDC1Q5TGY3 1603 aaPredicted RBP28.25■■■□□ 2.11
CLIP2-206ENST00000487091 IFT172Q9UG01 1749 aa28.24■■■□□ 2.11
CLIP2-206ENST00000487091 MST1RQ04912 1400 aa28.24■■■□□ 2.11
CLIP2-206ENST00000487091 HRCP23327 699 aa28.23■■■□□ 2.11
CLIP2-206ENST00000487091 ROBO2Q9HCK4 1378 aa28.23■■■□□ 2.11
CLIP2-206ENST00000487091 NALCNQ8IZF0 1738 aa28.21■■■□□ 2.11
CLIP2-206ENST00000487091 RGS17Q9UGC6 210 aaPredicted RBP28.19■■■□□ 2.1
CLIP2-206ENST00000487091 ASXL1Q8IXJ9 1541 aa28.17■■■□□ 2.1
CLIP2-206ENST00000487091 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
CLIP2-206ENST00000487091 SPATA31A6Q5VVP1 1343 aa28.14■■■□□ 2.09
CLIP2-206ENST00000487091 C1orf167Q5SNV9 1468 aa28.12■■■□□ 2.09
CLIP2-206ENST00000487091 LRPPRCP42704 1394 aaKnown RBP28.11■■■□□ 2.09
CLIP2-206ENST00000487091 TECPR2O15040 1411 aa28.11■■■□□ 2.09
CLIP2-206ENST00000487091 ABCC11Q96J66 1382 aa28.11■■■□□ 2.09
CLIP2-206ENST00000487091 NHSL1Q5SYE7 1610 aa28.1■■■□□ 2.09
CLIP2-206ENST00000487091 SHPRHQ149N8 1683 aa28.1■■■□□ 2.09
CLIP2-206ENST00000487091 C14orf93Q9H972 538 aaKnown RBP28.09■■■□□ 2.09
CLIP2-206ENST00000487091 MYOM2P54296 1465 aa28.08■■■□□ 2.09
CLIP2-206ENST00000487091 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
CLIP2-206ENST00000487091 TMEM132EQ6IEE7 984 aa28.08■■■□□ 2.09
CLIP2-206ENST00000487091 STK26Q9P289 416 aa28.08■■■□□ 2.09
CLIP2-206ENST00000487091 LRRC59Q96AG4 307 aaKnown RBP28.06■■■□□ 2.08
CLIP2-206ENST00000487091 KNDC1Q76NI1 1749 aa28.05■■■□□ 2.08
CLIP2-206ENST00000487091 YTHDC2Q9H6S0 1430 aaKnown RBP28.04■■■□□ 2.08
CLIP2-206ENST00000487091 POTEAQ6S8J7 498 aa28.03■■■□□ 2.08
CLIP2-206ENST00000487091 WAPLQ7Z5K2 1190 aa28.03■■■□□ 2.08
CLIP2-206ENST00000487091 SIRT1Q96EB6 747 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms