RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 TXNDC2Q86VQ3 553 aa17.05■□□□□ 0.32
LINC00996-202ENST00000486954 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.05■□□□□ 0.32
LINC00996-202ENST00000486954 NEURL4Q96JN8 1562 aa17.05■□□□□ 0.32
LINC00996-202ENST00000486954 NPHP4O75161 1426 aaPredicted RBP17.04■□□□□ 0.32
LINC00996-202ENST00000486954 IQGAP1P46940 1657 aa17.04■□□□□ 0.32
LINC00996-202ENST00000486954 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
LINC00996-202ENST00000486954 MED14O60244 1454 aa17.02■□□□□ 0.32
LINC00996-202ENST00000486954 NEXMIFQ5QGS0 1516 aa17.01■□□□□ 0.31
LINC00996-202ENST00000486954 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
LINC00996-202ENST00000486954 BCANQ96GW7 911 aa17■□□□□ 0.31
LINC00996-202ENST00000486954 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
LINC00996-202ENST00000486954 LTKP29376 864 aa16.99■□□□□ 0.31
LINC00996-202ENST00000486954 PPLO60437 1756 aa16.98■□□□□ 0.31
LINC00996-202ENST00000486954 RGL3Q3MIN7 710 aa16.98■□□□□ 0.31
LINC00996-202ENST00000486954 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
LINC00996-202ENST00000486954 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
LINC00996-202ENST00000486954 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
LINC00996-202ENST00000486954 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
LINC00996-202ENST00000486954 DIP2AQ14689 1571 aa16.94■□□□□ 0.3
LINC00996-202ENST00000486954 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
LINC00996-202ENST00000486954 MYOM2P54296 1465 aa16.92■□□□□ 0.3
LINC00996-202ENST00000486954 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
LINC00996-202ENST00000486954 NEUROD1Q13562 356 aa16.89■□□□□ 0.29
LINC00996-202ENST00000486954 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
LINC00996-202ENST00000486954 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
LINC00996-202ENST00000486954 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
LINC00996-202ENST00000486954 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
LINC00996-202ENST00000486954 SIN3AQ96ST3 1273 aa16.88■□□□□ 0.29
LINC00996-202ENST00000486954 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
LINC00996-202ENST00000486954 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
LINC00996-202ENST00000486954 DCAF11Q8TEB1 546 aa16.87■□□□□ 0.29
LINC00996-202ENST00000486954 ZNF335Q9H4Z2 1342 aaPredicted RBP16.87■□□□□ 0.29
LINC00996-202ENST00000486954 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
LINC00996-202ENST00000486954 TONSLQ96HA7 1378 aa16.86■□□□□ 0.29
LINC00996-202ENST00000486954 LAMC1P11047 1609 aa16.85■□□□□ 0.29
LINC00996-202ENST00000486954 ADGRF5Q8IZF2 1346 aa16.85■□□□□ 0.29
LINC00996-202ENST00000486954 PIK3R4Q99570 1358 aa16.85■□□□□ 0.29
LINC00996-202ENST00000486954 PIK3C2GO75747 1445 aa16.85■□□□□ 0.29
LINC00996-202ENST00000486954 CPS1P31327 1500 aa16.85■□□□□ 0.29
LINC00996-202ENST00000486954 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
LINC00996-202ENST00000486954 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
LINC00996-202ENST00000486954 NWD1Q149M9 1564 aa16.83■□□□□ 0.28
LINC00996-202ENST00000486954 ALKQ9UM73 1620 aa16.83■□□□□ 0.28
LINC00996-202ENST00000486954 LTBP4Q8N2S1 1624 aa16.81■□□□□ 0.28
LINC00996-202ENST00000486954 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
LINC00996-202ENST00000486954 SETD1AO15047 1707 aaKnown RBP16.81■□□□□ 0.28
LINC00996-202ENST00000486954 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
LINC00996-202ENST00000486954 KCNA6P17658 529 aa16.8■□□□□ 0.28
LINC00996-202ENST00000486954 L3MBTL2Q969R5 705 aa16.79■□□□□ 0.28
LINC00996-202ENST00000486954 STRCP1A6NGW2 1772 aa16.78■□□□□ 0.28
LINC00996-202ENST00000486954 METP08581 1390 aa16.77■□□□□ 0.28
LINC00996-202ENST00000486954 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.27
LINC00996-202ENST00000486954 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
LINC00996-202ENST00000486954 IQSEC2Q5JU85 1478 aa16.75■□□□□ 0.27
LINC00996-202ENST00000486954 C14orf93Q9H972 538 aaKnown RBP16.75■□□□□ 0.27
LINC00996-202ENST00000486954 AMOTL2Q9Y2J4 779 aa16.75■□□□□ 0.27
LINC00996-202ENST00000486954 KIAA1210Q9ULL0 1709 aa16.75■□□□□ 0.27
LINC00996-202ENST00000486954 PTPRUQ92729 1446 aa16.74■□□□□ 0.27
LINC00996-202ENST00000486954 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
LINC00996-202ENST00000486954 CERKQ8TCT0 537 aa16.74■□□□□ 0.27
LINC00996-202ENST00000486954 ASXL1Q8IXJ9 1541 aa16.74■□□□□ 0.27
LINC00996-202ENST00000486954 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
LINC00996-202ENST00000486954 PTCH1Q13635 1447 aa16.73■□□□□ 0.27
LINC00996-202ENST00000486954 PROSER2Q86WR7 435 aaPredicted RBP16.73■□□□□ 0.27
LINC00996-202ENST00000486954 KNDC1Q76NI1 1749 aa16.73■□□□□ 0.27
LINC00996-202ENST00000486954 TIMELESSQ9UNS1 1208 aa16.72■□□□□ 0.27
LINC00996-202ENST00000486954 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
LINC00996-202ENST00000486954 YTHDC2Q9H6S0 1430 aaKnown RBP16.71■□□□□ 0.27
LINC00996-202ENST00000486954 TMEM94Q12767 1356 aa16.7■□□□□ 0.26
LINC00996-202ENST00000486954 TMEM132EQ6IEE7 984 aa16.7■□□□□ 0.26
LINC00996-202ENST00000486954 ADGRB1O14514 1584 aa16.69■□□□□ 0.26
LINC00996-202ENST00000486954 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
LINC00996-202ENST00000486954 TRPM1Q7Z4N2 1603 aa16.69■□□□□ 0.26
LINC00996-202ENST00000486954 TECPR2O15040 1411 aa16.69■□□□□ 0.26
LINC00996-202ENST00000486954 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
LINC00996-202ENST00000486954 STK26Q9P289 416 aa16.68■□□□□ 0.26
LINC00996-202ENST00000486954 MSH6P52701 1360 aa16.67■□□□□ 0.26
LINC00996-202ENST00000486954 ABCC11Q96J66 1382 aa16.67■□□□□ 0.26
LINC00996-202ENST00000486954 ROCK2O75116 1388 aaKnown RBP16.66■□□□□ 0.26
LINC00996-202ENST00000486954 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
LINC00996-202ENST00000486954 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
LINC00996-202ENST00000486954 ROBO2Q9HCK4 1378 aa16.65■□□□□ 0.26
LINC00996-202ENST00000486954 RALGAPBQ86X10 1494 aa16.65■□□□□ 0.26
LINC00996-202ENST00000486954 FAM135BQ49AJ0 1406 aa16.63■□□□□ 0.25
LINC00996-202ENST00000486954 RBM33Q96EV2 1170 aaKnown RBP16.63■□□□□ 0.25
LINC00996-202ENST00000486954 ADGRL3Q9HAR2 1447 aa16.62■□□□□ 0.25
LINC00996-202ENST00000486954 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
LINC00996-202ENST00000486954 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
LINC00996-202ENST00000486954 TOM1O60784 492 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 NBPF1Q3BBV0 1214 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 POGKQ9P215 609 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 NALCNQ8IZF0 1738 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 EIF3AQ14152 1382 aaKnown RBP16.61■□□□□ 0.25
LINC00996-202ENST00000486954 DCCP43146 1447 aa16.61■□□□□ 0.25
LINC00996-202ENST00000486954 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
LINC00996-202ENST00000486954 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
LINC00996-202ENST00000486954 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
LINC00996-202ENST00000486954 ATF3P18847 181 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms