RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
USP41-204ENST00000486536 KDM4FA0A1W2PPD8 638 aa9.53□□□□□ -0.88
USP41-204ENST00000486536 C6orf132Q5T0Z8 1188 aa9.53□□□□□ -0.88
USP41-204ENST00000486536 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
USP41-204ENST00000486536 PADI6Q6TGC4 694 aa9.53□□□□□ -0.88
USP41-204ENST00000486536 RAD21O60216 631 aa9.52□□□□□ -0.89
USP41-204ENST00000486536 FOSBP53539 338 aa9.52□□□□□ -0.89
USP41-204ENST00000486536 PROSER2Q86WR7 435 aaPredicted RBP9.52□□□□□ -0.89
USP41-204ENST00000486536 METRNQ9UJH8 293 aa9.52□□□□□ -0.89
USP41-204ENST00000486536 PDIA4P13667 645 aaKnown RBP9.51□□□□□ -0.89
USP41-204ENST00000486536 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
USP41-204ENST00000486536 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
USP41-204ENST00000486536 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
USP41-204ENST00000486536 LOC105371045A0A1W2PR82 267 aa9.5□□□□□ -0.89
USP41-204ENST00000486536 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
USP41-204ENST00000486536 TTC13Q8NBP0 860 aa9.5□□□□□ -0.89
USP41-204ENST00000486536 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
USP41-204ENST00000486536 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.5□□□□□ -0.89
USP41-204ENST00000486536 IFT140Q96RY7 1462 aa9.49□□□□□ -0.89
USP41-204ENST00000486536 CLK2P49760 499 aaKnown RBP9.49□□□□□ -0.89
USP41-204ENST00000486536 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
USP41-204ENST00000486536 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
USP41-204ENST00000486536 IGF1RP08069 1367 aa9.48□□□□□ -0.89
USP41-204ENST00000486536 SPDYE5A6NIY4 337 aa9.47□□□□□ -0.89
USP41-204ENST00000486536 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
USP41-204ENST00000486536 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
USP41-204ENST00000486536 RBM27Q9P2N5 1060 aaKnown RBP9.47□□□□□ -0.89
USP41-204ENST00000486536 PRXQ9BXM0 1461 aa9.47□□□□□ -0.89
USP41-204ENST00000486536 RFC5P40937 340 aa9.46□□□□□ -0.9
USP41-204ENST00000486536 PRSS12P56730 875 aa9.46□□□□□ -0.9
USP41-204ENST00000486536 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
USP41-204ENST00000486536 SNRKQ9NRH2 765 aa9.46□□□□□ -0.9
USP41-204ENST00000486536 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.9
USP41-204ENST00000486536 GOLGA3Q08378 1498 aa9.46□□□□□ -0.9
USP41-204ENST00000486536 TMEM259Q4ZIN3 620 aa9.45□□□□□ -0.9
USP41-204ENST00000486536 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
USP41-204ENST00000486536 COG6Q9Y2V7 657 aa9.45□□□□□ -0.9
USP41-204ENST00000486536 KIF21BO75037 1637 aa9.45□□□□□ -0.9
USP41-204ENST00000486536 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
USP41-204ENST00000486536 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
USP41-204ENST00000486536 TDRD9Q8NDG6 1382 aaKnown RBP9.44□□□□□ -0.9
USP41-204ENST00000486536 TNIKQ9UKE5 1360 aa9.44□□□□□ -0.9
USP41-204ENST00000486536 GAPVD1Q14C86 1478 aa9.44□□□□□ -0.9
USP41-204ENST00000486536 WDR97A6NE52 1622 aa9.44□□□□□ -0.9
USP41-204ENST00000486536 RIMBP3CA6NJZ7 1639 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 RIMBP3BA6NNM3 1639 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 RIMBP3Q9UFD9 1639 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 CARMIL1Q5VZK9 1371 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
USP41-204ENST00000486536 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 CCDC97Q96F63 343 aaPredicted RBP9.43□□□□□ -0.9
USP41-204ENST00000486536 LIMD1Q9UGP4 676 aa9.43□□□□□ -0.9
USP41-204ENST00000486536 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
USP41-204ENST00000486536 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
USP41-204ENST00000486536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
USP41-204ENST00000486536 NUDT7P0C024 238 aa9.41□□□□□ -0.9
USP41-204ENST00000486536 POTEIP0CG38 1075 aa9.41□□□□□ -0.9
USP41-204ENST00000486536 PPP2R2DQ66LE6 453 aa9.41□□□□□ -0.9
USP41-204ENST00000486536 SPIRE2Q8WWL2 714 aa9.41□□□□□ -0.9
USP41-204ENST00000486536 ZNF330Q9Y3S2 320 aaPredicted RBP9.41□□□□□ -0.9
USP41-204ENST00000486536 RAPGEF2Q9Y4G8 1499 aa9.4□□□□□ -0.9
USP41-204ENST00000486536 RCCD1A6NED2 376 aa9.4□□□□□ -0.9
USP41-204ENST00000486536 ARSIQ5FYB1 569 aa9.4□□□□□ -0.9
USP41-204ENST00000486536 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP41-204ENST00000486536 GRIN2BQ13224 1484 aa9.4□□□□□ -0.91
USP41-204ENST00000486536 EYA1Q99502 592 aa9.39□□□□□ -0.91
USP41-204ENST00000486536 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
USP41-204ENST00000486536 AQRO60306 1485 aaKnown RBP eCLIP9.39□□□□□ -0.91
USP41-204ENST00000486536 SPTLC1O15269 473 aa9.38□□□□□ -0.91
USP41-204ENST00000486536 TUSC1Q2TAM9 212 aa9.38□□□□□ -0.91
USP41-204ENST00000486536 FAM198AQ9UFP1 575 aa9.38□□□□□ -0.91
USP41-204ENST00000486536 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
USP41-204ENST00000486536 ZNF608Q9ULD9 1512 aaPredicted RBP9.37□□□□□ -0.91
USP41-204ENST00000486536 CUL7Q14999 1698 aa9.37□□□□□ -0.91
USP41-204ENST00000486536 CD46P15529 392 aa9.37□□□□□ -0.91
USP41-204ENST00000486536 RANGAP1P46060 587 aaPredicted RBP9.37□□□□□ -0.91
USP41-204ENST00000486536 NUTM1Q86Y26 1132 aa9.37□□□□□ -0.91
USP41-204ENST00000486536 FHAD1B1AJZ9 1412 aa9.37□□□□□ -0.91
USP41-204ENST00000486536 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
USP41-204ENST00000486536 NECTIN2Q92692 538 aa9.36□□□□□ -0.91
USP41-204ENST00000486536 GDPD2Q9HCC8 539 aa9.36□□□□□ -0.91
USP41-204ENST00000486536 COL9A1P20849 921 aa9.35□□□□□ -0.91
USP41-204ENST00000486536 RSBN1LQ6PCB5 846 aaPredicted RBP9.35□□□□□ -0.91
USP41-204ENST00000486536 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
USP41-204ENST00000486536 MTMR14Q8NCE2 650 aa9.35□□□□□ -0.91
USP41-204ENST00000486536 CEP162Q5TB80 1403 aa9.34□□□□□ -0.91
USP41-204ENST00000486536 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
USP41-204ENST00000486536 CSPP1Q1MSJ5 1256 aa9.34□□□□□ -0.91
USP41-204ENST00000486536 MOXD2PA6NHM9 499 aa9.33□□□□□ -0.92
USP41-204ENST00000486536 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
USP41-204ENST00000486536 GPR153Q6NV75 609 aa9.33□□□□□ -0.92
USP41-204ENST00000486536 NUDT18Q6ZVK8 323 aa9.33□□□□□ -0.92
USP41-204ENST00000486536 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
USP41-204ENST00000486536 TRAIPQ9BWF2 469 aa9.33□□□□□ -0.92
USP41-204ENST00000486536 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
USP41-204ENST00000486536 MAGI1Q96QZ7 1491 aaPredicted RBP9.33□□□□□ -0.92
USP41-204ENST00000486536 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
USP41-204ENST00000486536 RIMBP2O15034 1052 aa9.32□□□□□ -0.92
USP41-204ENST00000486536 NDUFV2P19404 249 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms